RNA–Protein interactions for RNA: ENST00000547356.1

SMARCC2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 741 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-204ENST00000547356 JPH4Q96JJ6 628 aa39.66■■■■□ 3.94
SMARCC2-204ENST00000547356 PRG4Q92954 1404 aaPredicted RBP39.64■■■■□ 3.94
SMARCC2-204ENST00000547356 KIAA0586Q9BVV6 1533 aa39.6■■■■□ 3.93
SMARCC2-204ENST00000547356 RAPGEF2Q9Y4G8 1499 aa39.53■■■■□ 3.92
SMARCC2-204ENST00000547356 IQGAP2Q13576 1575 aa39.37■■■■□ 3.89
SMARCC2-204ENST00000547356 PRXQ9BXM0 1461 aa39.35■■■■□ 3.89
SMARCC2-204ENST00000547356 CHIC1Q5VXU3 224 aa39.33■■■■□ 3.89
SMARCC2-204ENST00000547356 TRHP20396 242 aaPredicted RBP39.28■■■■□ 3.88
SMARCC2-204ENST00000547356 CSRNP3Q8WYN3 585 aa39.25■■■■□ 3.87
SMARCC2-204ENST00000547356 FAM9AQ8IZU1 332 aaPredicted RBP39.21■■■■□ 3.87
SMARCC2-204ENST00000547356 TTBK1Q5TCY1 1321 aaPredicted RBP39.17■■■■□ 3.86
SMARCC2-204ENST00000547356 EEA1Q15075 1411 aa39.16■■■■□ 3.86
SMARCC2-204ENST00000547356 CARMIL2Q6F5E8 1435 aa39.16■■■■□ 3.86
SMARCC2-204ENST00000547356 DISP1Q96F81 1524 aa39.15■■■■□ 3.86
SMARCC2-204ENST00000547356 CTTNBP2Q8WZ74 1663 aa39.15■■■■□ 3.86
SMARCC2-204ENST00000547356 UGGT2Q9NYU1 1516 aa39.14■■■■□ 3.86
SMARCC2-204ENST00000547356 PTPRGP23470 1445 aa39.11■■■■□ 3.85
SMARCC2-204ENST00000547356 TNIKQ9UKE5 1360 aa39.09■■■■□ 3.85
SMARCC2-204ENST00000547356 ADCY10Q96PN6 1610 aa39.07■■■■□ 3.85
SMARCC2-204ENST00000547356 KIAA0556O60303 1618 aa39.02■■■■□ 3.84
SMARCC2-204ENST00000547356 NPM1P06748 294 aaKnown RBP eCLIP38.9■■■■□ 3.82
SMARCC2-204ENST00000547356 GOLGA3Q08378 1498 aa38.85■■■■□ 3.81
SMARCC2-204ENST00000547356 KIF21BO75037 1637 aa38.84■■■■□ 3.81
SMARCC2-204ENST00000547356 UACAQ9BZF9 1416 aa38.83■■■■□ 3.81
SMARCC2-204ENST00000547356 EHMT2Q96KQ7 1210 aa38.81■■■■□ 3.8
SMARCC2-204ENST00000547356 MAPKBP1O60336 1514 aa38.8■■■■□ 3.8
SMARCC2-204ENST00000547356 ABCC2Q92887 1545 aa38.78■■■■□ 3.8
SMARCC2-204ENST00000547356 UHRF1BP1LA0JNW5 1464 aa38.77■■■■□ 3.8
SMARCC2-204ENST00000547356 P3H3Q8IVL6 736 aa38.76■■■■□ 3.8
SMARCC2-204ENST00000547356 RANGAP1P46060 587 aaPredicted RBP38.73■■■■□ 3.79
SMARCC2-204ENST00000547356 KIF13AQ9H1H9 1805 aa38.73■■■■□ 3.79
SMARCC2-204ENST00000547356 PLB1Q6P1J6 1458 aa38.71■■■■□ 3.79
SMARCC2-204ENST00000547356 ABCC10Q5T3U5 1492 aa38.68■■■■□ 3.78
SMARCC2-204ENST00000547356 SAMD9Q5K651 1589 aa38.65■■■■□ 3.78
SMARCC2-204ENST00000547356 FAM69CQ0P6D2 419 aa38.65■■■■□ 3.78
SMARCC2-204ENST00000547356 DIP2BQ9P265 1576 aa38.64■■■■□ 3.78
SMARCC2-204ENST00000547356 KDM5BQ9UGL1 1544 aa38.62■■■■□ 3.77
SMARCC2-204ENST00000547356 ABCA8O94911 1581 aa38.61■■■■□ 3.77
SMARCC2-204ENST00000547356 ASXL2Q76L83 1435 aa38.59■■■■□ 3.77
SMARCC2-204ENST00000547356 ZCCHC11Q5TAX3 1644 aaKnown RBP38.57■■■■□ 3.77
SMARCC2-204ENST00000547356 UBTFP17480 764 aaKnown RBP38.57■■■■□ 3.76
SMARCC2-204ENST00000547356 FHOD3Q2V2M9 1422 aa38.51■■■■□ 3.76
SMARCC2-204ENST00000547356 ARID3CA6NKF2 412 aa38.44■■■■□ 3.74
SMARCC2-204ENST00000547356 EFCAB5A4FU69 1503 aa38.4■■■■□ 3.74
SMARCC2-204ENST00000547356 TSPOAP1O95153 1857 aa38.35■■■■□ 3.73
SMARCC2-204ENST00000547356 EPRSP07814 1512 aaKnown RBP38.35■■■■□ 3.73
SMARCC2-204ENST00000547356 RAPGEF6Q8TEU7 1601 aa38.34■■■■□ 3.73
SMARCC2-204ENST00000547356 WDR7Q9Y4E6 1490 aa38.34■■■■□ 3.73
SMARCC2-204ENST00000547356 GLI2P10070 1586 aa38.32■■■■□ 3.73
SMARCC2-204ENST00000547356 ATP10BO94823 1461 aa38.3■■■■□ 3.72
SMARCC2-204ENST00000547356 ARHGAP35Q9NRY4 1499 aa38.27■■■■□ 3.72
SMARCC2-204ENST00000547356 NUP153P49790 1475 aaKnown RBP38.24■■■■□ 3.71
SMARCC2-204ENST00000547356 KCNH8Q96L42 1107 aa38.21■■■■□ 3.71
SMARCC2-204ENST00000547356 PPRC1Q5VV67 1664 aaKnown RBP38.2■■■■□ 3.71
SMARCC2-204ENST00000547356 MAP3K4Q9Y6R4 1608 aa38.17■■■■□ 3.7
SMARCC2-204ENST00000547356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.13■■■■□ 3.69
SMARCC2-204ENST00000547356 HNRNPUL2Q1KMD3 747 aaKnown RBP38.13■■■■□ 3.69
SMARCC2-204ENST00000547356 KDM6BO15054 1643 aa38.08■■■■□ 3.69
SMARCC2-204ENST00000547356 FMN1Q68DA7 1419 aa38.04■■■■□ 3.68
SMARCC2-204ENST00000547356 CD109Q6YHK3 1445 aa38.01■■■■□ 3.68
SMARCC2-204ENST00000547356 CDK13Q14004 1512 aaKnown RBP38.01■■■■□ 3.67
SMARCC2-204ENST00000547356 CFAP43Q8NDM7 1665 aa37.99■■■■□ 3.67
SMARCC2-204ENST00000547356 ATP1B4Q9UN42 357 aaPredicted RBP37.99■■■■□ 3.67
SMARCC2-204ENST00000547356 TEX14Q8IWB6 1497 aa37.96■■■■□ 3.67
SMARCC2-204ENST00000547356 CLIP1P30622 1438 aa37.94■■■■□ 3.66
SMARCC2-204ENST00000547356 HECW1Q76N89 1606 aa37.93■■■■□ 3.66
SMARCC2-204ENST00000547356 MAGI3Q5TCQ9 1506 aa37.92■■■■□ 3.66
SMARCC2-204ENST00000547356 COL17A1Q9UMD9 1497 aaPredicted RBP37.91■■■■□ 3.66
SMARCC2-204ENST00000547356 PLEKHD1A6NEE1 506 aa37.89■■■■□ 3.66
SMARCC2-204ENST00000547356 ABCA9Q8IUA7 1624 aa37.89■■■■□ 3.66
SMARCC2-204ENST00000547356 PCF11O94913 1555 aaKnown RBP37.83■■■■□ 3.65
SMARCC2-204ENST00000547356 LOC105371045A0A1W2PR82 267 aa37.8■■■■□ 3.64
SMARCC2-204ENST00000547356 LRRIQ1Q96JM4 1722 aa37.79■■■■□ 3.64
SMARCC2-204ENST00000547356 CASKIN1Q8WXD9 1431 aa37.76■■■■□ 3.63
SMARCC2-204ENST00000547356 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.72■■■■□ 3.636e-6■■□□□ 13.3
SMARCC2-204ENST00000547356 CEP162Q5TB80 1403 aa37.72■■■■□ 3.63
SMARCC2-204ENST00000547356 TTC37Q6PGP7 1564 aa37.7■■■■□ 3.63
SMARCC2-204ENST00000547356 FYCO1Q9BQS8 1478 aa37.64■■■■□ 3.62
SMARCC2-204ENST00000547356 CDK11AQ9UQ88 783 aaPredicted RBP37.62■■■■□ 3.61
SMARCC2-204ENST00000547356 TROQ12816 1431 aaPredicted RBP37.61■■■■□ 3.61
SMARCC2-204ENST00000547356 CCDC18Q5T9S5 1454 aa37.6■■■■□ 3.61
SMARCC2-204ENST00000547356 KIF14Q15058 1648 aa37.6■■■■□ 3.61
SMARCC2-204ENST00000547356 ARAP3Q8WWN8 1544 aa37.58■■■■□ 3.61
SMARCC2-204ENST00000547356 NEO1Q92859 1461 aa37.58■■■■□ 3.61
SMARCC2-204ENST00000547356 PHLDB1Q86UU1 1377 aa37.52■■■■□ 3.6
SMARCC2-204ENST00000547356 FANCAO15360 1455 aa37.52■■■■□ 3.6
SMARCC2-204ENST00000547356 RAPGEF3O95398 923 aa37.49■■■■□ 3.59
SMARCC2-204ENST00000547356 PLCH2O75038 1416 aa37.46■■■■□ 3.59
SMARCC2-204ENST00000547356 AKNAQ7Z591 1439 aa37.46■■■■□ 3.59
SMARCC2-204ENST00000547356 AEBP2Q6ZN18 517 aaPredicted RBP37.43■■■■□ 3.58
SMARCC2-204ENST00000547356 FRMPD1Q5SYB0 1578 aa37.42■■■■□ 3.58
SMARCC2-204ENST00000547356 CFAP74Q9C0B2 1584 aa37.42■■■■□ 3.58
SMARCC2-204ENST00000547356 MYO5CQ9NQX4 1742 aa37.41■■■■□ 3.58
SMARCC2-204ENST00000547356 KDM4FA0A1W2PPD8 638 aa37.39■■■■□ 3.58
SMARCC2-204ENST00000547356 DENND4BO75064 1496 aaPredicted RBP37.35■■■■□ 3.57
SMARCC2-204ENST00000547356 ADGRL1O94910 1474 aa37.31■■■■□ 3.56
SMARCC2-204ENST00000547356 ARHGAP5Q13017 1502 aa37.31■■■■□ 3.56
SMARCC2-204ENST00000547356 EFCAB2Q5VUJ9 269 aa37.3■■■■□ 3.56
SMARCC2-204ENST00000547356 RICTORQ6R327 1708 aa37.3■■■■□ 3.56
SMARCC2-204ENST00000547356 SCAPERQ9BY12 1400 aa37.27■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 856.3 ms