RNA–Protein interactions for RNA: ENST00000546079.5

CLPTM1-203, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-203ENST00000546079 DNAJC5BQ9UF47 199 aa23.6■■□□□ 1.37
CLPTM1-203ENST00000546079 POLA1P09884 1462 aaPredicted RBP23.55■■□□□ 1.36
CLPTM1-203ENST00000546079 ARAP1Q96P48 1450 aa23.54■■□□□ 1.36
CLPTM1-203ENST00000546079 RANGAP1P46060 587 aaPredicted RBP23.53■■□□□ 1.36
CLPTM1-203ENST00000546079 NEFLP07196 543 aa23.52■■□□□ 1.36
CLPTM1-203ENST00000546079 ABCA10Q8WWZ4 1543 aa23.52■■□□□ 1.36
CLPTM1-203ENST00000546079 RAD54L2Q9Y4B4 1467 aa23.51■■□□□ 1.35
CLPTM1-203ENST00000546079 URB2Q14146 1524 aaKnown RBP23.5■■□□□ 1.35
CLPTM1-203ENST00000546079 CARMIL1Q5VZK9 1371 aa23.47■■□□□ 1.35
CLPTM1-203ENST00000546079 PDS5BQ9NTI5 1447 aa23.46■■□□□ 1.35
CLPTM1-203ENST00000546079 MSH5O43196 834 aa23.45■■□□□ 1.35
CLPTM1-203ENST00000546079 RRBP1Q9P2E9 1410 aaKnown RBP23.44■■□□□ 1.34
CLPTM1-203ENST00000546079 KIF21AQ7Z4S6 1674 aa23.44■■□□□ 1.34
CLPTM1-203ENST00000546079 WDR97A6NE52 1622 aa23.43■■□□□ 1.34
CLPTM1-203ENST00000546079 ARHGAP35Q9NRY4 1499 aa23.42■■□□□ 1.34
CLPTM1-203ENST00000546079 FANCIQ9NVI1 1328 aa23.41■■□□□ 1.34
CLPTM1-203ENST00000546079 CCER2I3L3R5 266 aa23.34■■□□□ 1.33
CLPTM1-203ENST00000546079 CUL7Q14999 1698 aa23.33■■□□□ 1.33
CLPTM1-203ENST00000546079 ITGAEP38570 1179 aa23.33■■□□□ 1.33
CLPTM1-203ENST00000546079 MYT1LQ9UL68 1186 aa23.33■■□□□ 1.33
CLPTM1-203ENST00000546079 KANK4Q5T7N3 995 aaPredicted RBP23.32■■□□□ 1.32
CLPTM1-203ENST00000546079 DDX10Q13206 875 aaKnown RBP23.32■■□□□ 1.32
CLPTM1-203ENST00000546079 ABCA5Q8WWZ7 1642 aa23.31■■□□□ 1.32
CLPTM1-203ENST00000546079 PPP1R15AO75807 674 aaPredicted RBP23.3■■□□□ 1.32
CLPTM1-203ENST00000546079 CCNB3Q8WWL7 1395 aa23.27■■□□□ 1.32
CLPTM1-203ENST00000546079 MAPKBP1O60336 1514 aa23.26■■□□□ 1.31
CLPTM1-203ENST00000546079 TARBP1Q13395 1621 aaKnown RBP23.23■■□□□ 1.31
CLPTM1-203ENST00000546079 ERICH6Q7L0X2 663 aa23.23■■□□□ 1.31
CLPTM1-203ENST00000546079 TRIM52Q96A61 297 aa23.22■■□□□ 1.31
CLPTM1-203ENST00000546079 TDRD9Q8NDG6 1382 aaKnown RBP23.21■■□□□ 1.31
CLPTM1-203ENST00000546079 GAPVD1Q14C86 1478 aa23.2■■□□□ 1.31
CLPTM1-203ENST00000546079 PRKCSHP14314 528 aaPredicted RBP23.2■■□□□ 1.3
CLPTM1-203ENST00000546079 RAB3GAP2Q9H2M9 1393 aa23.2■■□□□ 1.3
CLPTM1-203ENST00000546079 CDK11AQ9UQ88 783 aaPredicted RBP23.2■■□□□ 1.3
CLPTM1-203ENST00000546079 CTTNBP2Q8WZ74 1663 aa23.19■■□□□ 1.3
CLPTM1-203ENST00000546079 ANP32CO43423 234 aa23.17■■□□□ 1.3
CLPTM1-203ENST00000546079 TIMELESSQ9UNS1 1208 aa23.16■■□□□ 1.3
CLPTM1-203ENST00000546079 MRC2Q9UBG0 1479 aa23.16■■□□□ 1.3
CLPTM1-203ENST00000546079 MAP3K1Q13233 1512 aa23.11■■□□□ 1.29
CLPTM1-203ENST00000546079 EFCAB5A4FU69 1503 aa23.11■■□□□ 1.29
CLPTM1-203ENST00000546079 TIAM1Q13009 1591 aa23.1■■□□□ 1.29
CLPTM1-203ENST00000546079 ERICH6BQ5W0A0 696 aa23.08■■□□□ 1.28
CLPTM1-203ENST00000546079 FHAD1B1AJZ9 1412 aa23.07■■□□□ 1.28
CLPTM1-203ENST00000546079 SETD5Q9C0A6 1442 aa23.07■■□□□ 1.28
CLPTM1-203ENST00000546079 PBRM1Q86U86 1689 aa23.06■■□□□ 1.28
CLPTM1-203ENST00000546079 PCF11O94913 1555 aaKnown RBP23.06■■□□□ 1.28
CLPTM1-203ENST00000546079 DEKP35659 375 aaKnown RBP23.05■■□□□ 1.28
CLPTM1-203ENST00000546079 FHOD3Q2V2M9 1422 aa23.04■■□□□ 1.28
CLPTM1-203ENST00000546079 WDR62O43379 1518 aa23.04■■□□□ 1.28
CLPTM1-203ENST00000546079 CFAP43Q8NDM7 1665 aa23.02■■□□□ 1.28
CLPTM1-203ENST00000546079 SIN3AQ96ST3 1273 aa23.02■■□□□ 1.28
CLPTM1-203ENST00000546079 P3H3Q8IVL6 736 aa23.01■■□□□ 1.27
CLPTM1-203ENST00000546079 SAMD9Q5K651 1589 aa22.99■■□□□ 1.27
CLPTM1-203ENST00000546079 AQRO60306 1485 aaKnown RBP eCLIP22.98■■□□□ 1.271e-6■■■■■ 37
CLPTM1-203ENST00000546079 LRRC9Q6ZRR7 1453 aa22.98■■□□□ 1.27
CLPTM1-203ENST00000546079 FYCO1Q9BQS8 1478 aa22.96■■□□□ 1.27
CLPTM1-203ENST00000546079 ADAMTS12P58397 1594 aa22.96■■□□□ 1.27
CLPTM1-203ENST00000546079 IFT140Q96RY7 1462 aa22.95■■□□□ 1.26
CLPTM1-203ENST00000546079 CASKIN1Q8WXD9 1431 aa22.94■■□□□ 1.26
CLPTM1-203ENST00000546079 PPP4R2Q9NY27 417 aa22.94■■□□□ 1.26
CLPTM1-203ENST00000546079 HIRIP3Q9BW71 556 aaPredicted RBP22.92■■□□□ 1.26
CLPTM1-203ENST00000546079 GRIN2BQ13224 1484 aa22.91■■□□□ 1.26
CLPTM1-203ENST00000546079 ZNF608Q9ULD9 1512 aaPredicted RBP22.91■■□□□ 1.26
CLPTM1-203ENST00000546079 HNRNPUQ00839 825 aaKnown RBP eCLIP22.9■■□□□ 1.26
CLPTM1-203ENST00000546079 SNAPC4Q5SXM2 1469 aa22.9■■□□□ 1.26
CLPTM1-203ENST00000546079 FMN1Q68DA7 1419 aa22.9■■□□□ 1.26
CLPTM1-203ENST00000546079 IRX6P78412 446 aaPredicted RBP22.89■■□□□ 1.25
CLPTM1-203ENST00000546079 THOC2Q8NI27 1593 aaKnown RBP22.88■■□□□ 1.25
CLPTM1-203ENST00000546079 ERCC6Q03468 1493 aa22.85■■□□□ 1.25
CLPTM1-203ENST00000546079 PHLDB1Q86UU1 1377 aa22.84■■□□□ 1.25
CLPTM1-203ENST00000546079 NOP58Q9Y2X3 529 aaKnown RBP22.83■■□□□ 1.25
CLPTM1-203ENST00000546079 LRRIQ1Q96JM4 1722 aa22.82■■□□□ 1.24
CLPTM1-203ENST00000546079 IQGAP2Q13576 1575 aa22.81■■□□□ 1.24
CLPTM1-203ENST00000546079 EIF4G3O43432 1585 aaKnown RBP22.8■■□□□ 1.24
CLPTM1-203ENST00000546079 ATP1B4Q9UN42 357 aaPredicted RBP22.8■■□□□ 1.24
CLPTM1-203ENST00000546079 TONSLQ96HA7 1378 aa22.73■■□□□ 1.23
CLPTM1-203ENST00000546079 FAM50AQ14320 339 aaKnown RBP22.72■■□□□ 1.23
CLPTM1-203ENST00000546079 ANO8Q9HCE9 1232 aaPredicted RBP22.71■■□□□ 1.23
CLPTM1-203ENST00000546079 UGGT2Q9NYU1 1516 aa22.7■■□□□ 1.23
CLPTM1-203ENST00000546079 NBR1Q14596 966 aa22.7■■□□□ 1.22
CLPTM1-203ENST00000546079 PAK3O75914 559 aaPredicted RBP22.69■■□□□ 1.22
CLPTM1-203ENST00000546079 B4GALNT3Q6L9W6 998 aa22.69■■□□□ 1.22
CLPTM1-203ENST00000546079 GRIN2AQ12879 1464 aa22.67■■□□□ 1.22
CLPTM1-203ENST00000546079 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.67■■□□□ 1.22
CLPTM1-203ENST00000546079 KIAA0586Q9BVV6 1533 aa22.66■■□□□ 1.22
CLPTM1-203ENST00000546079 MAGI1Q96QZ7 1491 aaPredicted RBP22.64■■□□□ 1.22
CLPTM1-203ENST00000546079 MTUS2Q5JR59 1369 aa22.63■■□□□ 1.21
CLPTM1-203ENST00000546079 HECW1Q76N89 1606 aa22.62■■□□□ 1.21
CLPTM1-203ENST00000546079 EHBP1L1Q8N3D4 1523 aa22.61■■□□□ 1.21
CLPTM1-203ENST00000546079 CCDC18Q5T9S5 1454 aa22.61■■□□□ 1.21
CLPTM1-203ENST00000546079 FGD6Q6ZV73 1430 aa22.6■■□□□ 1.21
CLPTM1-203ENST00000546079 IPO9Q96P70 1041 aaKnown RBP22.6■■□□□ 1.21
CLPTM1-203ENST00000546079 MAGI3Q5TCQ9 1506 aa22.6■■□□□ 1.21
CLPTM1-203ENST00000546079 ZBED9Q6R2W3 1325 aa22.6■■□□□ 1.21
CLPTM1-203ENST00000546079 DISP1Q96F81 1524 aa22.59■■□□□ 1.21
CLPTM1-203ENST00000546079 KIAA0556O60303 1618 aa22.59■■□□□ 1.21
CLPTM1-203ENST00000546079 RTL5Q5HYW3 569 aaPredicted RBP22.59■■□□□ 1.21
CLPTM1-203ENST00000546079 SUPT6HQ7KZ85 1726 aaKnown RBP22.59■■□□□ 1.21
CLPTM1-203ENST00000546079 SYNJ2O15056 1496 aa22.58■■□□□ 1.2
CLPTM1-203ENST00000546079 NCOA2Q15596 1464 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms