RNA–Protein interactions for RNA: ENST00000546079.5

CLPTM1-203, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-203ENST00000546079 NISCHQ9Y2I1 1504 aa33.35■■■□□ 2.93
CLPTM1-203ENST00000546079 CCDC180Q9P1Z9 1646 aa28.76■■■□□ 2.19
CLPTM1-203ENST00000546079 ZCCHC6Q5VYS8 1495 aaKnown RBP28.13■■■□□ 2.09
CLPTM1-203ENST00000546079 HRCP23327 699 aa28.01■■■□□ 2.07
CLPTM1-203ENST00000546079 SHROOM4Q9ULL8 1493 aa27.69■■■□□ 2.02
CLPTM1-203ENST00000546079 DCAF1Q9Y4B6 1507 aa27.51■■□□□ 1.99
CLPTM1-203ENST00000546079 DCAF8L2P0C7V8 631 aa27.39■■□□□ 1.97
CLPTM1-203ENST00000546079 SUPT5HO00267 1087 aaKnown RBP27.35■■□□□ 1.97
CLPTM1-203ENST00000546079 PCGF6Q9BYE7 350 aa27.27■■□□□ 1.96
CLPTM1-203ENST00000546079 MYO15BQ96JP2 1530 aa27.21■■□□□ 1.95
CLPTM1-203ENST00000546079 PELP1Q8IZL8 1130 aaKnown RBP27.21■■□□□ 1.95
CLPTM1-203ENST00000546079 PPARGC1BQ86YN6 1023 aaKnown RBP27.19■■□□□ 1.94
CLPTM1-203ENST00000546079 CHIC1Q5VXU3 224 aa27.11■■□□□ 1.93
CLPTM1-203ENST00000546079 ABCC9O60706 1549 aa26.8■■□□□ 1.88
CLPTM1-203ENST00000546079 NACADO15069 1562 aa26.65■■□□□ 1.86
CLPTM1-203ENST00000546079 SCRIBQ14160 1630 aa26.63■■□□□ 1.85
CLPTM1-203ENST00000546079 TRIM26Q12899 539 aaPredicted RBP26.55■■□□□ 1.84
CLPTM1-203ENST00000546079 ZEB1P37275 1124 aaPredicted RBP26.45■■□□□ 1.82
CLPTM1-203ENST00000546079 SCAF1Q9H7N4 1312 aaKnown RBP26.41■■□□□ 1.82
CLPTM1-203ENST00000546079 LOC105371045A0A1W2PR82 267 aa26.33■■□□□ 1.81
CLPTM1-203ENST00000546079 RB1CC1Q8TDY2 1594 aa26.29■■□□□ 1.8
CLPTM1-203ENST00000546079 MYT1Q01538 1121 aa26.22■■□□□ 1.79
CLPTM1-203ENST00000546079 RSF1Q96T23 1441 aaPredicted RBP26.11■■□□□ 1.77
CLPTM1-203ENST00000546079 CECR2Q9BXF3 1484 aa25.94■■□□□ 1.74
CLPTM1-203ENST00000546079 UNC13AQ9UPW8 1703 aa25.92■■□□□ 1.74
CLPTM1-203ENST00000546079 ACIN1Q9UKV3 1341 aaKnown RBP25.84■■□□□ 1.73
CLPTM1-203ENST00000546079 MROH2BQ7Z745 1585 aa25.84■■□□□ 1.73
CLPTM1-203ENST00000546079 NEUROD1Q13562 356 aa25.68■■□□□ 1.7
CLPTM1-203ENST00000546079 BAZ1AQ9NRL2 1556 aaPredicted RBP25.67■■□□□ 1.7
CLPTM1-203ENST00000546079 WIZO95785 1651 aa25.67■■□□□ 1.7
CLPTM1-203ENST00000546079 BICRAQ9NZM4 1560 aa25.6■■□□□ 1.69
CLPTM1-203ENST00000546079 GTF3C3Q9Y5Q9 886 aa25.54■■□□□ 1.68
CLPTM1-203ENST00000546079 CENPBP07199 599 aaPredicted RBP25.53■■□□□ 1.68
CLPTM1-203ENST00000546079 SMARCA4P51532 1647 aa25.53■■□□□ 1.68
CLPTM1-203ENST00000546079 TRIM41Q8WV44 630 aa25.42■■□□□ 1.66
CLPTM1-203ENST00000546079 PABPN1Q86U42 306 aaKnown RBP eCLIP25.41■■□□□ 1.66
CLPTM1-203ENST00000546079 DIEXFQ68CQ4 756 aaKnown RBP25.35■■□□□ 1.65
CLPTM1-203ENST00000546079 TOP2AP11388 1531 aaKnown RBP25.34■■□□□ 1.65
CLPTM1-203ENST00000546079 CCER1Q8TC90 406 aaPredicted RBP25.26■■□□□ 1.63
CLPTM1-203ENST00000546079 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.24■■□□□ 1.63
CLPTM1-203ENST00000546079 EIF4G1Q04637 1599 aaKnown RBP25.22■■□□□ 1.63
CLPTM1-203ENST00000546079 FAM9AQ8IZU1 332 aaPredicted RBP25.21■■□□□ 1.63
CLPTM1-203ENST00000546079 SMARCA2P51531 1590 aa25.17■■□□□ 1.62
CLPTM1-203ENST00000546079 PEG3Q9GZU2 1588 aa25.17■■□□□ 1.62
CLPTM1-203ENST00000546079 CCDC88BA6NC98 1476 aa25.13■■□□□ 1.61
CLPTM1-203ENST00000546079 ATAD2BQ9ULI0 1458 aa24.96■■□□□ 1.59
CLPTM1-203ENST00000546079 EHMT2Q96KQ7 1210 aa24.95■■□□□ 1.58
CLPTM1-203ENST00000546079 ZNF316A6NFI3 1004 aaPredicted RBP24.9■■□□□ 1.58
CLPTM1-203ENST00000546079 ABCC8Q09428 1581 aa24.84■■□□□ 1.57
CLPTM1-203ENST00000546079 BAZ1BQ9UIG0 1483 aaKnown RBP24.83■■□□□ 1.57
CLPTM1-203ENST00000546079 WRNQ14191 1432 aaPredicted RBP eCLIP24.75■■□□□ 1.55
CLPTM1-203ENST00000546079 YTHDC1Q96MU7 727 aaKnown RBP24.74■■□□□ 1.55
CLPTM1-203ENST00000546079 MIER1Q8N108 512 aa24.66■■□□□ 1.54
CLPTM1-203ENST00000546079 TTBK1Q5TCY1 1321 aaPredicted RBP24.64■■□□□ 1.53
CLPTM1-203ENST00000546079 HMGXB3Q12766 1538 aa24.63■■□□□ 1.53
CLPTM1-203ENST00000546079 NCAPD3P42695 1498 aa24.62■■□□□ 1.53
CLPTM1-203ENST00000546079 CLSPNQ9HAW4 1339 aa24.57■■□□□ 1.52
CLPTM1-203ENST00000546079 SYNJ1O43426 1573 aa24.47■■□□□ 1.51
CLPTM1-203ENST00000546079 SOGA1O94964 1423 aa24.47■■□□□ 1.51
CLPTM1-203ENST00000546079 CEP162Q5TB80 1403 aa24.45■■□□□ 1.51
CLPTM1-203ENST00000546079 EEA1Q15075 1411 aa24.4■■□□□ 1.5
CLPTM1-203ENST00000546079 RUSC2Q8N2Y8 1516 aa24.38■■□□□ 1.49
CLPTM1-203ENST00000546079 ANP32EQ9BTT0 268 aa24.38■■□□□ 1.49
CLPTM1-203ENST00000546079 TNIKQ9UKE5 1360 aa24.38■■□□□ 1.49
CLPTM1-203ENST00000546079 SUPT16HQ9Y5B9 1047 aaKnown RBP24.36■■□□□ 1.49
CLPTM1-203ENST00000546079 TOP2BQ02880 1626 aa24.27■■□□□ 1.48
CLPTM1-203ENST00000546079 CSRNP3Q8WYN3 585 aa24.27■■□□□ 1.48
CLPTM1-203ENST00000546079 BCL11AQ9H165 835 aa24.27■■□□□ 1.48
CLPTM1-203ENST00000546079 TSHZ2Q9NRE2 1034 aa24.27■■□□□ 1.48
CLPTM1-203ENST00000546079 CFTRP13569 1480 aa24.26■■□□□ 1.47
CLPTM1-203ENST00000546079 CC2D2AQ9P2K1 1620 aa24.25■■□□□ 1.47
CLPTM1-203ENST00000546079 BIVM-ERCC5R4GMW8 1640 aa24.24■■□□□ 1.47
CLPTM1-203ENST00000546079 PRDM2Q13029 1718 aa24.16■■□□□ 1.46
CLPTM1-203ENST00000546079 GOLGA3Q08378 1498 aa24.14■■□□□ 1.46
CLPTM1-203ENST00000546079 KIF21BO75037 1637 aa24.12■■□□□ 1.45
CLPTM1-203ENST00000546079 HNRNPUL2Q1KMD3 747 aaKnown RBP24.11■■□□□ 1.45
CLPTM1-203ENST00000546079 CUX1P39880 1505 aa24.11■■□□□ 1.45
CLPTM1-203ENST00000546079 CEP164Q9UPV0 1460 aa24.08■■□□□ 1.44
CLPTM1-203ENST00000546079 UBTFP17480 764 aaKnown RBP24.06■■□□□ 1.44
CLPTM1-203ENST00000546079 CADPSQ9ULU8 1353 aa24.04■■□□□ 1.44
CLPTM1-203ENST00000546079 RAPGEF2Q9Y4G8 1499 aa23.94■■□□□ 1.42
CLPTM1-203ENST00000546079 PRXQ9BXM0 1461 aa23.85■■□□□ 1.41
CLPTM1-203ENST00000546079 ERICH3Q5RHP9 1530 aa23.84■■□□□ 1.41
CLPTM1-203ENST00000546079 KIF27Q86VH2 1401 aa23.83■■□□□ 1.4
CLPTM1-203ENST00000546079 VPS8Q8N3P4 1428 aa23.83■■□□□ 1.4
CLPTM1-203ENST00000546079 DHX57Q6P158 1386 aaKnown RBP23.82■■□□□ 1.4
CLPTM1-203ENST00000546079 CLIP1P30622 1438 aa23.8■■□□□ 1.4
CLPTM1-203ENST00000546079 FANCD2Q9BXW9 1451 aa23.8■■□□□ 1.4
CLPTM1-203ENST00000546079 APLP2Q06481 763 aa23.76■■□□□ 1.39
CLPTM1-203ENST00000546079 NESP48681 1621 aa23.74■■□□□ 1.39
CLPTM1-203ENST00000546079 FGD5Q6ZNL6 1462 aa23.74■■□□□ 1.39
CLPTM1-203ENST00000546079 RBM19Q9Y4C8 960 aaKnown RBP23.7■■□□□ 1.38
CLPTM1-203ENST00000546079 CUX2O14529 1486 aa23.68■■□□□ 1.38
CLPTM1-203ENST00000546079 LAMC3Q9Y6N6 1575 aa23.68■■□□□ 1.38
CLPTM1-203ENST00000546079 DNMBPQ6XZF7 1577 aa23.67■■□□□ 1.38
CLPTM1-203ENST00000546079 FKBP8Q14318 412 aa23.66■■□□□ 1.38
CLPTM1-203ENST00000546079 BCANQ96GW7 911 aa23.65■■□□□ 1.38
CLPTM1-203ENST00000546079 TOPBP1Q92547 1522 aa23.61■■□□□ 1.37
CLPTM1-203ENST00000546079 IGF1RP08069 1367 aa23.6■■□□□ 1.37
CLPTM1-203ENST00000546079 KCNH8Q96L42 1107 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms