RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 PRG4Q92954 1404 aaPredicted RBP36.73■■■■□ 3.47
SCARB1-210ENST00000545493 JPH4Q96JJ6 628 aa36.63■■■■□ 3.45
SCARB1-210ENST00000545493 KIAA0586Q9BVV6 1533 aa36.62■■■■□ 3.45
SCARB1-210ENST00000545493 CARMIL1Q5VZK9 1371 aa36.56■■■■□ 3.44
SCARB1-210ENST00000545493 ADCY10Q96PN6 1610 aa36.4■■■■□ 3.42
SCARB1-210ENST00000545493 IQGAP2Q13576 1575 aa36.39■■■■□ 3.42
SCARB1-210ENST00000545493 KIF13AQ9H1H9 1805 aa36.34■■■■□ 3.41
SCARB1-210ENST00000545493 RAPGEF2Q9Y4G8 1499 aa36.33■■■■□ 3.41
SCARB1-210ENST00000545493 MAPKBP1O60336 1514 aa36.26■■■■□ 3.4
SCARB1-210ENST00000545493 DISP1Q96F81 1524 aa36.19■■■■□ 3.38
SCARB1-210ENST00000545493 CARMIL2Q6F5E8 1435 aa36.18■■■■□ 3.38
SCARB1-210ENST00000545493 UGGT2Q9NYU1 1516 aa36.16■■■■□ 3.38
SCARB1-210ENST00000545493 TNIKQ9UKE5 1360 aa36.15■■■■□ 3.38
SCARB1-210ENST00000545493 DIP2BQ9P265 1576 aa36.15■■■■□ 3.38
SCARB1-210ENST00000545493 CTTNBP2Q8WZ74 1663 aa36.15■■■■□ 3.38
SCARB1-210ENST00000545493 PTPRGP23470 1445 aa36.15■■■■□ 3.38
SCARB1-210ENST00000545493 ABCC10Q5T3U5 1492 aa36.13■■■■□ 3.37
SCARB1-210ENST00000545493 KIAA0556O60303 1618 aa36.1■■■■□ 3.37
SCARB1-210ENST00000545493 PRXQ9BXM0 1461 aa36.08■■■■□ 3.37
SCARB1-210ENST00000545493 NPM1P06748 294 aaKnown RBP eCLIP36.06■■■■□ 3.36
SCARB1-210ENST00000545493 ABCC2Q92887 1545 aa36.03■■■■□ 3.36
SCARB1-210ENST00000545493 TTBK1Q5TCY1 1321 aaPredicted RBP36.02■■■■□ 3.36
SCARB1-210ENST00000545493 UHRF1BP1LA0JNW5 1464 aa35.99■■■■□ 3.35
SCARB1-210ENST00000545493 FAM69CQ0P6D2 419 aa35.95■■■■□ 3.35
SCARB1-210ENST00000545493 UACAQ9BZF9 1416 aa35.94■■■■□ 3.34
SCARB1-210ENST00000545493 KDM5BQ9UGL1 1544 aa35.84■■■■□ 3.33
SCARB1-210ENST00000545493 ASXL2Q76L83 1435 aa35.83■■■■□ 3.33
SCARB1-210ENST00000545493 ZCCHC11Q5TAX3 1644 aaKnown RBP35.83■■■■□ 3.33
SCARB1-210ENST00000545493 GOLGA3Q08378 1498 aa35.82■■■■□ 3.32
SCARB1-210ENST00000545493 TSPOAP1O95153 1857 aa35.8■■■■□ 3.32
SCARB1-210ENST00000545493 PLB1Q6P1J6 1458 aa35.79■■■■□ 3.32
SCARB1-210ENST00000545493 GLI2P10070 1586 aa35.76■■■■□ 3.31
SCARB1-210ENST00000545493 EEA1Q15075 1411 aa35.73■■■■□ 3.31
SCARB1-210ENST00000545493 ABCA8O94911 1581 aa35.72■■■■□ 3.31
SCARB1-210ENST00000545493 PPRC1Q5VV67 1664 aaKnown RBP35.72■■■■□ 3.31
SCARB1-210ENST00000545493 CSRNP3Q8WYN3 585 aa35.71■■■■□ 3.31
SCARB1-210ENST00000545493 KDM6BO15054 1643 aa35.69■■■■□ 3.3
SCARB1-210ENST00000545493 EPRSP07814 1512 aaKnown RBP35.66■■■■□ 3.3
SCARB1-210ENST00000545493 SAMD9Q5K651 1589 aa35.65■■■■□ 3.3
SCARB1-210ENST00000545493 MAP3K4Q9Y6R4 1608 aa35.61■■■■□ 3.29
SCARB1-210ENST00000545493 WDR7Q9Y4E6 1490 aa35.58■■■■□ 3.29
SCARB1-210ENST00000545493 KIF21BO75037 1637 aa35.54■■■■□ 3.28
SCARB1-210ENST00000545493 FAM9AQ8IZU1 332 aaPredicted RBP35.45■■■■□ 3.27
SCARB1-210ENST00000545493 P3H3Q8IVL6 736 aa35.43■■■■□ 3.26
SCARB1-210ENST00000545493 RAPGEF6Q8TEU7 1601 aa35.39■■■■□ 3.26
SCARB1-210ENST00000545493 TEX14Q8IWB6 1497 aa35.39■■■■□ 3.26
SCARB1-210ENST00000545493 CFAP43Q8NDM7 1665 aa35.39■■■■□ 3.26
SCARB1-210ENST00000545493 AEBP2Q6ZN18 517 aaPredicted RBP35.38■■■■□ 3.25
SCARB1-210ENST00000545493 CHIC1Q5VXU3 224 aa35.37■■■■□ 3.25
SCARB1-210ENST00000545493 FHOD3Q2V2M9 1422 aa35.34■■■■□ 3.25
SCARB1-210ENST00000545493 ATP10BO94823 1461 aa35.34■■■■□ 3.25
SCARB1-210ENST00000545493 COL17A1Q9UMD9 1497 aaPredicted RBP35.34■■■■□ 3.25
SCARB1-210ENST00000545493 EFCAB5A4FU69 1503 aa35.31■■■■□ 3.24
SCARB1-210ENST00000545493 MAGI3Q5TCQ9 1506 aa35.27■■■■□ 3.24
SCARB1-210ENST00000545493 ARID3CA6NKF2 412 aa35.26■■■■□ 3.24
SCARB1-210ENST00000545493 NUP153P49790 1475 aaKnown RBP35.25■■■■□ 3.23
SCARB1-210ENST00000545493 CD109Q6YHK3 1445 aa35.23■■■■□ 3.23
SCARB1-210ENST00000545493 RANGAP1P46060 587 aaPredicted RBP35.23■■■■□ 3.23
SCARB1-210ENST00000545493 KCNH8Q96L42 1107 aa35.2■■■■□ 3.23
SCARB1-210ENST00000545493 ABCA9Q8IUA7 1624 aa35.17■■■■□ 3.22
SCARB1-210ENST00000545493 KDM4FA0A1W2PPD8 638 aa35.08■■■■□ 3.21
SCARB1-210ENST00000545493 EHMT2Q96KQ7 1210 aa35.06■■■■□ 3.2
SCARB1-210ENST00000545493 ARHGAP35Q9NRY4 1499 aa35.03■■■■□ 3.2
SCARB1-210ENST00000545493 UBTFP17480 764 aaKnown RBP34.99■■■■□ 3.19
SCARB1-210ENST00000545493 ADGRL1O94910 1474 aa34.98■■■■□ 3.19
SCARB1-210ENST00000545493 ARAP3Q8WWN8 1544 aa34.97■■■■□ 3.19
SCARB1-210ENST00000545493 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.97■■■■□ 3.19
SCARB1-210ENST00000545493 HNRNPUL2Q1KMD3 747 aaKnown RBP34.97■■■■□ 3.19
SCARB1-210ENST00000545493 CDK13Q14004 1512 aaKnown RBP34.96■■■■□ 3.19
SCARB1-210ENST00000545493 HECW1Q76N89 1606 aa34.92■■■■□ 3.18
SCARB1-210ENST00000545493 NEO1Q92859 1461 aa34.9■■■■□ 3.18
SCARB1-210ENST00000545493 FMN1Q68DA7 1419 aa34.89■■■■□ 3.18
SCARB1-210ENST00000545493 TTC37Q6PGP7 1564 aa34.88■■■■□ 3.17
SCARB1-210ENST00000545493 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.87■■■■□ 3.172e-7■■■■□ 22.7
SCARB1-210ENST00000545493 FRMPD1Q5SYB0 1578 aa34.85■■■■□ 3.17
SCARB1-210ENST00000545493 PHLDB1Q86UU1 1377 aa34.84■■■■□ 3.17
SCARB1-210ENST00000545493 PLEKHD1A6NEE1 506 aa34.81■■■■□ 3.16
SCARB1-210ENST00000545493 LRRIQ1Q96JM4 1722 aa34.78■■■■□ 3.16
SCARB1-210ENST00000545493 CFAP74Q9C0B2 1584 aa34.76■■■■□ 3.16
SCARB1-210ENST00000545493 PCF11O94913 1555 aaKnown RBP34.71■■■■□ 3.15
SCARB1-210ENST00000545493 FANCAO15360 1455 aa34.71■■■■□ 3.15
SCARB1-210ENST00000545493 RICTORQ6R327 1708 aa34.7■■■■□ 3.15
SCARB1-210ENST00000545493 RAPGEF3O95398 923 aa34.68■■■■□ 3.14
SCARB1-210ENST00000545493 KIF14Q15058 1648 aa34.67■■■■□ 3.14
SCARB1-210ENST00000545493 AKNAQ7Z591 1439 aa34.65■■■■□ 3.14
SCARB1-210ENST00000545493 ARHGEF40Q8TER5 1519 aa34.63■■■■□ 3.13
SCARB1-210ENST00000545493 ATP1B4Q9UN42 357 aaPredicted RBP34.62■■■■□ 3.13
SCARB1-210ENST00000545493 MYO5CQ9NQX4 1742 aa34.61■■■■□ 3.13
SCARB1-210ENST00000545493 DENND4BO75064 1496 aaPredicted RBP34.61■■■■□ 3.13
SCARB1-210ENST00000545493 TROQ12816 1431 aaPredicted RBP34.58■■■■□ 3.13
SCARB1-210ENST00000545493 CASKIN1Q8WXD9 1431 aa34.58■■■■□ 3.13
SCARB1-210ENST00000545493 PLCH2O75038 1416 aa34.57■■■■□ 3.13
SCARB1-210ENST00000545493 ZMYM4Q5VZL5 1548 aa34.57■■■■□ 3.12
SCARB1-210ENST00000545493 CCDC18Q5T9S5 1454 aa34.53■■■■□ 3.12
SCARB1-210ENST00000545493 CLIP1P30622 1438 aa34.52■■■■□ 3.12
SCARB1-210ENST00000545493 ADAMTSL3P82987 1691 aa34.51■■■■□ 3.12
SCARB1-210ENST00000545493 FYCO1Q9BQS8 1478 aa34.51■■■■□ 3.11
SCARB1-210ENST00000545493 CDK11AQ9UQ88 783 aaPredicted RBP34.49■■■■□ 3.11
SCARB1-210ENST00000545493 BCORL1Q5H9F3 1711 aa34.48■■■■□ 3.11
SCARB1-210ENST00000545493 POGZQ7Z3K3 1410 aa34.47■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms