RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 JPH4Q96JJ6 628 aa39.59■■■■□ 3.93
CHFR-222ENST00000544093 KIAA0586Q9BVV6 1533 aa39.58■■■■□ 3.93
CHFR-222ENST00000544093 PRG4Q92954 1404 aaPredicted RBP39.56■■■■□ 3.92
CHFR-222ENST00000544093 RAPGEF2Q9Y4G8 1499 aa39.43■■■■□ 3.9
CHFR-222ENST00000544093 IQGAP2Q13576 1575 aa39.32■■■■□ 3.88
CHFR-222ENST00000544093 TRHP20396 242 aaPredicted RBP39.31■■■■□ 3.88
CHFR-222ENST00000544093 CARMIL2Q6F5E8 1435 aa39.21■■■■□ 3.87
CHFR-222ENST00000544093 PRXQ9BXM0 1461 aa39.17■■■■□ 3.86
CHFR-222ENST00000544093 EEA1Q15075 1411 aa39.13■■■■□ 3.85
CHFR-222ENST00000544093 CTTNBP2Q8WZ74 1663 aa39.1■■■■□ 3.85
CHFR-222ENST00000544093 UGGT2Q9NYU1 1516 aa39.09■■■■□ 3.85
CHFR-222ENST00000544093 TNIKQ9UKE5 1360 aa39.07■■■■□ 3.84
CHFR-222ENST00000544093 PTPRGP23470 1445 aa39.06■■■■□ 3.84
CHFR-222ENST00000544093 CSRNP3Q8WYN3 585 aa39.04■■■■□ 3.84
CHFR-222ENST00000544093 ADCY10Q96PN6 1610 aa39.01■■■■□ 3.84
CHFR-222ENST00000544093 DISP1Q96F81 1524 aa39.01■■■■□ 3.84
CHFR-222ENST00000544093 NPM1P06748 294 aaKnown RBP eCLIP39■■■■□ 3.83
CHFR-222ENST00000544093 KIAA0556O60303 1618 aa38.92■■■■□ 3.82
CHFR-222ENST00000544093 MAPKBP1O60336 1514 aa38.9■■■■□ 3.82
CHFR-222ENST00000544093 GOLGA3Q08378 1498 aa38.89■■■■□ 3.82
CHFR-222ENST00000544093 CHIC1Q5VXU3 224 aa38.87■■■■□ 3.81
CHFR-222ENST00000544093 TTBK1Q5TCY1 1321 aaPredicted RBP38.83■■■■□ 3.81
CHFR-222ENST00000544093 UHRF1BP1LA0JNW5 1464 aa38.81■■■■□ 3.8
CHFR-222ENST00000544093 UACAQ9BZF9 1416 aa38.8■■■■□ 3.8
CHFR-222ENST00000544093 ABCC2Q92887 1545 aa38.78■■■■□ 3.8
CHFR-222ENST00000544093 KIF13AQ9H1H9 1805 aa38.77■■■■□ 3.8
CHFR-222ENST00000544093 ABCC10Q5T3U5 1492 aa38.73■■■■□ 3.79
CHFR-222ENST00000544093 FAM9AQ8IZU1 332 aaPredicted RBP38.7■■■■□ 3.79
CHFR-222ENST00000544093 KIF21BO75037 1637 aa38.7■■■■□ 3.79
CHFR-222ENST00000544093 DIP2BQ9P265 1576 aa38.65■■■■□ 3.78
CHFR-222ENST00000544093 FAM69CQ0P6D2 419 aa38.62■■■■□ 3.77
CHFR-222ENST00000544093 KDM5BQ9UGL1 1544 aa38.61■■■■□ 3.77
CHFR-222ENST00000544093 PLB1Q6P1J6 1458 aa38.58■■■■□ 3.77
CHFR-222ENST00000544093 SAMD9Q5K651 1589 aa38.56■■■■□ 3.76
CHFR-222ENST00000544093 ASXL2Q76L83 1435 aa38.54■■■■□ 3.76
CHFR-222ENST00000544093 ABCA8O94911 1581 aa38.51■■■■□ 3.76
CHFR-222ENST00000544093 ZCCHC11Q5TAX3 1644 aaKnown RBP38.51■■■■□ 3.76
CHFR-222ENST00000544093 GLI2P10070 1586 aa38.41■■■■□ 3.74
CHFR-222ENST00000544093 P3H3Q8IVL6 736 aa38.4■■■■□ 3.74
CHFR-222ENST00000544093 EFCAB5A4FU69 1503 aa38.37■■■■□ 3.73
CHFR-222ENST00000544093 EPRSP07814 1512 aaKnown RBP38.32■■■■□ 3.72
CHFR-222ENST00000544093 TSPOAP1O95153 1857 aa38.31■■■■□ 3.72
CHFR-222ENST00000544093 WDR7Q9Y4E6 1490 aa38.31■■■■□ 3.72
CHFR-222ENST00000544093 UBTFP17480 764 aaKnown RBP38.31■■■■□ 3.72
CHFR-222ENST00000544093 RANGAP1P46060 587 aaPredicted RBP38.28■■■■□ 3.72
CHFR-222ENST00000544093 RAPGEF6Q8TEU7 1601 aa38.26■■■■□ 3.71
CHFR-222ENST00000544093 FHOD3Q2V2M9 1422 aa38.23■■■■□ 3.71
CHFR-222ENST00000544093 MAP3K4Q9Y6R4 1608 aa38.2■■■■□ 3.71
CHFR-222ENST00000544093 ATP10BO94823 1461 aa38.16■■■■□ 3.7
CHFR-222ENST00000544093 EHMT2Q96KQ7 1210 aa38.16■■■■□ 3.7
CHFR-222ENST00000544093 KDM6BO15054 1643 aa38.15■■■■□ 3.7
CHFR-222ENST00000544093 PPRC1Q5VV67 1664 aaKnown RBP38.14■■■■□ 3.7
CHFR-222ENST00000544093 TEX14Q8IWB6 1497 aa38.11■■■■□ 3.69
CHFR-222ENST00000544093 NUP153P49790 1475 aaKnown RBP38.08■■■■□ 3.69
CHFR-222ENST00000544093 CFAP43Q8NDM7 1665 aa38.07■■■■□ 3.69
CHFR-222ENST00000544093 ARID3CA6NKF2 412 aa38.04■■■■□ 3.68
CHFR-222ENST00000544093 KCNH8Q96L42 1107 aa38.04■■■■□ 3.68
CHFR-222ENST00000544093 FMN1Q68DA7 1419 aa38.01■■■■□ 3.68
CHFR-222ENST00000544093 ARHGAP35Q9NRY4 1499 aa38.01■■■■□ 3.67
CHFR-222ENST00000544093 CD109Q6YHK3 1445 aa37.98■■■■□ 3.67
CHFR-222ENST00000544093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.98■■■■□ 3.67
CHFR-222ENST00000544093 HNRNPUL2Q1KMD3 747 aaKnown RBP37.98■■■■□ 3.67
CHFR-222ENST00000544093 MAGI3Q5TCQ9 1506 aa37.97■■■■□ 3.67
CHFR-222ENST00000544093 ABCA9Q8IUA7 1624 aa37.89■■■■□ 3.66
CHFR-222ENST00000544093 HECW1Q76N89 1606 aa37.86■■■■□ 3.65
CHFR-222ENST00000544093 PLEKHD1A6NEE1 506 aa37.85■■■■□ 3.65
CHFR-222ENST00000544093 COL17A1Q9UMD9 1497 aaPredicted RBP37.76■■■■□ 3.63
CHFR-222ENST00000544093 CDK13Q14004 1512 aaKnown RBP37.73■■■■□ 3.63
CHFR-222ENST00000544093 PHLDB1Q86UU1 1377 aa37.73■■■■□ 3.63
CHFR-222ENST00000544093 ATP1B4Q9UN42 357 aaPredicted RBP37.71■■■■□ 3.63
CHFR-222ENST00000544093 CLIP1P30622 1438 aa37.7■■■■□ 3.62
CHFR-222ENST00000544093 CDK11AQ9UQ88 783 aaPredicted RBP37.68■■■■□ 3.62
CHFR-222ENST00000544093 ARAP3Q8WWN8 1544 aa37.66■■■■□ 3.62
CHFR-222ENST00000544093 NEO1Q92859 1461 aa37.64■■■■□ 3.62
CHFR-222ENST00000544093 AEBP2Q6ZN18 517 aaPredicted RBP37.64■■■■□ 3.62
CHFR-222ENST00000544093 CASKIN1Q8WXD9 1431 aa37.63■■■■□ 3.61
CHFR-222ENST00000544093 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.61■■■■□ 3.61
CHFR-222ENST00000544093 PCF11O94913 1555 aaKnown RBP37.58■■■■□ 3.61
CHFR-222ENST00000544093 CCDC18Q5T9S5 1454 aa37.58■■■■□ 3.61
CHFR-222ENST00000544093 FYCO1Q9BQS8 1478 aa37.55■■■■□ 3.6
CHFR-222ENST00000544093 CFAP74Q9C0B2 1584 aa37.55■■■■□ 3.6
CHFR-222ENST00000544093 LRRIQ1Q96JM4 1722 aa37.54■■■■□ 3.6
CHFR-222ENST00000544093 TTC37Q6PGP7 1564 aa37.54■■■■□ 3.6
CHFR-222ENST00000544093 TROQ12816 1431 aaPredicted RBP37.5■■■■□ 3.59
CHFR-222ENST00000544093 KIF14Q15058 1648 aa37.48■■■■□ 3.59
CHFR-222ENST00000544093 FANCAO15360 1455 aa37.46■■■■□ 3.59
CHFR-222ENST00000544093 CEP162Q5TB80 1403 aa37.43■■■■□ 3.58
CHFR-222ENST00000544093 PLCH2O75038 1416 aa37.41■■■■□ 3.58
CHFR-222ENST00000544093 MYO5CQ9NQX4 1742 aa37.41■■■■□ 3.58
CHFR-222ENST00000544093 AKNAQ7Z591 1439 aa37.4■■■■□ 3.58
CHFR-222ENST00000544093 DENND4BO75064 1496 aaPredicted RBP37.34■■■■□ 3.57
CHFR-222ENST00000544093 KDM4FA0A1W2PPD8 638 aa37.34■■■■□ 3.57
CHFR-222ENST00000544093 RAPGEF3O95398 923 aa37.33■■■■□ 3.57
CHFR-222ENST00000544093 FRMPD1Q5SYB0 1578 aa37.31■■■■□ 3.56
CHFR-222ENST00000544093 ADGRL1O94910 1474 aa37.29■■■■□ 3.56
CHFR-222ENST00000544093 RICTORQ6R327 1708 aa37.28■■■■□ 3.56
CHFR-222ENST00000544093 EFCAB2Q5VUJ9 269 aa37.27■■■■□ 3.56
CHFR-222ENST00000544093 ARHGAP5Q13017 1502 aa37.21■■■■□ 3.55
CHFR-222ENST00000544093 LOC105371045A0A1W2PR82 267 aa37.21■■■■□ 3.55
CHFR-222ENST00000544093 ZMYM4Q5VZL5 1548 aa37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 1102.5 ms