RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 CHIC1Q5VXU3 224 aa18.5■□□□□ 0.55
DDB1-222ENST00000543627 TTBK1Q5TCY1 1321 aaPredicted RBP18.49■□□□□ 0.55
DDB1-222ENST00000543627 PRG4Q92954 1404 aaPredicted RBP18.46■□□□□ 0.55
DDB1-222ENST00000543627 ERCC6L2Q5T890 1561 aa18.46■□□□□ 0.55
DDB1-222ENST00000543627 RAPGEF2Q9Y4G8 1499 aa18.44■□□□□ 0.54
DDB1-222ENST00000543627 CSRNP3Q8WYN3 585 aa18.43■□□□□ 0.54
DDB1-222ENST00000543627 KIAA0586Q9BVV6 1533 aa18.41■□□□□ 0.54
DDB1-222ENST00000543627 TRHP20396 242 aaPredicted RBP18.41■□□□□ 0.54
DDB1-222ENST00000543627 EHMT2Q96KQ7 1210 aa18.41■□□□□ 0.54
DDB1-222ENST00000543627 SHROOM2Q13796 1616 aa18.37■□□□□ 0.53
DDB1-222ENST00000543627 RANGAP1P46060 587 aaPredicted RBP18.33■□□□□ 0.52
DDB1-222ENST00000543627 IQGAP2Q13576 1575 aa18.3■□□□□ 0.52
DDB1-222ENST00000543627 PRXQ9BXM0 1461 aa18.29■□□□□ 0.52
DDB1-222ENST00000543627 EEA1Q15075 1411 aa18.29■□□□□ 0.52
DDB1-222ENST00000543627 CARMIL2Q6F5E8 1435 aa18.29■□□□□ 0.52
DDB1-222ENST00000543627 NPM1P06748 294 aaKnown RBP eCLIP18.27■□□□□ 0.52
DDB1-222ENST00000543627 PTPRGP23470 1445 aa18.24■□□□□ 0.51
DDB1-222ENST00000543627 P3H3Q8IVL6 736 aa18.24■□□□□ 0.51
DDB1-222ENST00000543627 TNIKQ9UKE5 1360 aa18.21■□□□□ 0.51
DDB1-222ENST00000543627 UBTFP17480 764 aaKnown RBP18.21■□□□□ 0.51
DDB1-222ENST00000543627 CTTNBP2Q8WZ74 1663 aa18.2■□□□□ 0.5
DDB1-222ENST00000543627 DISP1Q96F81 1524 aa18.17■□□□□ 0.5
DDB1-222ENST00000543627 UGGT2Q9NYU1 1516 aa18.16■□□□□ 0.5
DDB1-222ENST00000543627 GOLGA3Q08378 1498 aa18.12■□□□□ 0.49
DDB1-222ENST00000543627 KIAA0556O60303 1618 aa18.11■□□□□ 0.49
DDB1-222ENST00000543627 ADCY10Q96PN6 1610 aa18.09■□□□□ 0.49
DDB1-222ENST00000543627 ARID3CA6NKF2 412 aa18.08■□□□□ 0.48
DDB1-222ENST00000543627 KIF21BO75037 1637 aa18.08■□□□□ 0.48
DDB1-222ENST00000543627 UACAQ9BZF9 1416 aa18.07■□□□□ 0.48
DDB1-222ENST00000543627 FAM69CQ0P6D2 419 aa18.07■□□□□ 0.48
DDB1-222ENST00000543627 PLB1Q6P1J6 1458 aa18.01■□□□□ 0.47
DDB1-222ENST00000543627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.01■□□□□ 0.47
DDB1-222ENST00000543627 HNRNPUL2Q1KMD3 747 aaKnown RBP18.01■□□□□ 0.47
DDB1-222ENST00000543627 ABCC2Q92887 1545 aa17.99■□□□□ 0.47
DDB1-222ENST00000543627 ATP1B4Q9UN42 357 aaPredicted RBP17.98■□□□□ 0.47
DDB1-222ENST00000543627 FHOD3Q2V2M9 1422 aa17.98■□□□□ 0.47
DDB1-222ENST00000543627 UHRF1BP1LA0JNW5 1464 aa17.97■□□□□ 0.47
DDB1-222ENST00000543627 KCNH8Q96L42 1107 aa17.95■□□□□ 0.46
DDB1-222ENST00000543627 MAPKBP1O60336 1514 aa17.94■□□□□ 0.46
DDB1-222ENST00000543627 ASXL2Q76L83 1435 aa17.94■□□□□ 0.46
DDB1-222ENST00000543627 ABCC10Q5T3U5 1492 aa17.94■□□□□ 0.46
DDB1-222ENST00000543627 SAMD9Q5K651 1589 aa17.93■□□□□ 0.46
DDB1-222ENST00000543627 ZCCHC11Q5TAX3 1644 aaKnown RBP17.9■□□□□ 0.46
DDB1-222ENST00000543627 KDM5BQ9UGL1 1544 aa17.9■□□□□ 0.46
DDB1-222ENST00000543627 KIF13AQ9H1H9 1805 aa17.9■□□□□ 0.46
DDB1-222ENST00000543627 ABCA8O94911 1581 aa17.9■□□□□ 0.46
DDB1-222ENST00000543627 DIP2BQ9P265 1576 aa17.87■□□□□ 0.45
DDB1-222ENST00000543627 TSPOAP1O95153 1857 aa17.86■□□□□ 0.45
DDB1-222ENST00000543627 LOC105371045A0A1W2PR82 267 aa17.86■□□□□ 0.45
DDB1-222ENST00000543627 EFCAB5A4FU69 1503 aa17.86■□□□□ 0.45
DDB1-222ENST00000543627 RAPGEF6Q8TEU7 1601 aa17.84■□□□□ 0.45
DDB1-222ENST00000543627 ATP10BO94823 1461 aa17.82■□□□□ 0.44
DDB1-222ENST00000543627 ARHGAP35Q9NRY4 1499 aa17.82■□□□□ 0.44
DDB1-222ENST00000543627 WDR7Q9Y4E6 1490 aa17.81■□□□□ 0.44
DDB1-222ENST00000543627 EPRSP07814 1512 aaKnown RBP17.8■□□□□ 0.44
DDB1-222ENST00000543627 PLEKHD1A6NEE1 506 aa17.79■□□□□ 0.44
DDB1-222ENST00000543627 NUP153P49790 1475 aaKnown RBP17.77■□□□□ 0.44
DDB1-222ENST00000543627 FMN1Q68DA7 1419 aa17.77■□□□□ 0.44
DDB1-222ENST00000543627 CLIP1P30622 1438 aa17.76■□□□□ 0.43
DDB1-222ENST00000543627 GLI2P10070 1586 aa17.73■□□□□ 0.43
DDB1-222ENST00000543627 CD109Q6YHK3 1445 aa17.72■□□□□ 0.43
DDB1-222ENST00000543627 AEBP2Q6ZN18 517 aaPredicted RBP17.72■□□□□ 0.43
DDB1-222ENST00000543627 CDK13Q14004 1512 aaKnown RBP17.7■□□□□ 0.42
DDB1-222ENST00000543627 CDK11AQ9UQ88 783 aaPredicted RBP17.68■□□□□ 0.42
DDB1-222ENST00000543627 CEP162Q5TB80 1403 aa17.66■□□□□ 0.42
DDB1-222ENST00000543627 KDM6BO15054 1643 aa17.66■□□□□ 0.42
DDB1-222ENST00000543627 HECW1Q76N89 1606 aa17.66■□□□□ 0.42
DDB1-222ENST00000543627 MAP3K4Q9Y6R4 1608 aa17.66■□□□□ 0.42
DDB1-222ENST00000543627 TEX14Q8IWB6 1497 aa17.65■□□□□ 0.42
DDB1-222ENST00000543627 PPRC1Q5VV67 1664 aaKnown RBP17.63■□□□□ 0.41
DDB1-222ENST00000543627 CFAP43Q8NDM7 1665 aa17.61■□□□□ 0.41
DDB1-222ENST00000543627 CASKIN1Q8WXD9 1431 aa17.61■□□□□ 0.41
DDB1-222ENST00000543627 PCF11O94913 1555 aaKnown RBP17.61■□□□□ 0.41
DDB1-222ENST00000543627 MAGI3Q5TCQ9 1506 aa17.57■□□□□ 0.4
DDB1-222ENST00000543627 ABCA9Q8IUA7 1624 aa17.56■□□□□ 0.4
DDB1-222ENST00000543627 COL17A1Q9UMD9 1497 aaPredicted RBP17.56■□□□□ 0.4
DDB1-222ENST00000543627 FYCO1Q9BQS8 1478 aa17.54■□□□□ 0.4
DDB1-222ENST00000543627 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.53■□□□□ 0.41e-23■■■■□ 26.7
DDB1-222ENST00000543627 LRRIQ1Q96JM4 1722 aa17.53■□□□□ 0.4
DDB1-222ENST00000543627 CCDC18Q5T9S5 1454 aa17.53■□□□□ 0.4
DDB1-222ENST00000543627 RAPGEF3O95398 923 aa17.52■□□□□ 0.4
DDB1-222ENST00000543627 TROQ12816 1431 aaPredicted RBP17.52■□□□□ 0.4
DDB1-222ENST00000543627 TTC37Q6PGP7 1564 aa17.49■□□□□ 0.39
DDB1-222ENST00000543627 KIF14Q15058 1648 aa17.47■□□□□ 0.39
DDB1-222ENST00000543627 EFCAB2Q5VUJ9 269 aa17.47■□□□□ 0.39
DDB1-222ENST00000543627 MTUS2Q5JR59 1369 aa17.47■□□□□ 0.39
DDB1-222ENST00000543627 FANCAO15360 1455 aa17.47■□□□□ 0.39
DDB1-222ENST00000543627 MYT1LQ9UL68 1186 aa17.46■□□□□ 0.39
DDB1-222ENST00000543627 ZNF777Q9ULD5 760 aaPredicted RBP17.46■□□□□ 0.39
DDB1-222ENST00000543627 AKNAQ7Z591 1439 aa17.46■□□□□ 0.39
DDB1-222ENST00000543627 NEO1Q92859 1461 aa17.45■□□□□ 0.38
DDB1-222ENST00000543627 PHLDB1Q86UU1 1377 aa17.45■□□□□ 0.38
DDB1-222ENST00000543627 PLCH2O75038 1416 aa17.45■□□□□ 0.38
DDB1-222ENST00000543627 APLP2Q06481 763 aa17.43■□□□□ 0.38
DDB1-222ENST00000543627 ARHGAP5Q13017 1502 aa17.42■□□□□ 0.38
DDB1-222ENST00000543627 ARAP3Q8WWN8 1544 aa17.42■□□□□ 0.38
DDB1-222ENST00000543627 VPS8Q8N3P4 1428 aa17.41■□□□□ 0.38
DDB1-222ENST00000543627 DENND4BO75064 1496 aaPredicted RBP17.4■□□□□ 0.38
DDB1-222ENST00000543627 MYO5CQ9NQX4 1742 aa17.4■□□□□ 0.38
DDB1-222ENST00000543627 SCAPERQ9BY12 1400 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms