RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 JPH4Q96JJ6 628 aa17.47■□□□□ 0.39
NPIPB4-217ENST00000543449 KIAA0586Q9BVV6 1533 aa17.45■□□□□ 0.38
NPIPB4-217ENST00000543449 RUSC2Q8N2Y8 1516 aa17.43■□□□□ 0.38
NPIPB4-217ENST00000543449 PRG4Q92954 1404 aaPredicted RBP17.42■□□□□ 0.38
NPIPB4-217ENST00000543449 RAPGEF2Q9Y4G8 1499 aa17.37■□□□□ 0.37
NPIPB4-217ENST00000543449 ERCC6L2Q5T890 1561 aa17.36■□□□□ 0.37
NPIPB4-217ENST00000543449 TRHP20396 242 aaPredicted RBP17.35■□□□□ 0.37
NPIPB4-217ENST00000543449 CARMIL2Q6F5E8 1435 aa17.32■□□□□ 0.36
NPIPB4-217ENST00000543449 IQGAP2Q13576 1575 aa17.29■□□□□ 0.36
NPIPB4-217ENST00000543449 EEA1Q15075 1411 aa17.28■□□□□ 0.36
NPIPB4-217ENST00000543449 NPM1P06748 294 aaKnown RBP eCLIP17.26■□□□□ 0.35
NPIPB4-217ENST00000543449 TNIKQ9UKE5 1360 aa17.24■□□□□ 0.35
NPIPB4-217ENST00000543449 PRXQ9BXM0 1461 aa17.24■□□□□ 0.35
NPIPB4-217ENST00000543449 PTPRGP23470 1445 aa17.22■□□□□ 0.35
NPIPB4-217ENST00000543449 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
NPIPB4-217ENST00000543449 UGGT2Q9NYU1 1516 aa17.21■□□□□ 0.34
NPIPB4-217ENST00000543449 GOLGA3Q08378 1498 aa17.18■□□□□ 0.34
NPIPB4-217ENST00000543449 FAM9AQ8IZU1 332 aaPredicted RBP17.16■□□□□ 0.34
NPIPB4-217ENST00000543449 CTTNBP2Q8WZ74 1663 aa17.15■□□□□ 0.34
NPIPB4-217ENST00000543449 DISP1Q96F81 1524 aa17.15■□□□□ 0.34
NPIPB4-217ENST00000543449 MAPKBP1O60336 1514 aa17.14■□□□□ 0.33
NPIPB4-217ENST00000543449 ADCY10Q96PN6 1610 aa17.12■□□□□ 0.33
NPIPB4-217ENST00000543449 UHRF1BP1LA0JNW5 1464 aa17.12■□□□□ 0.33
NPIPB4-217ENST00000543449 UACAQ9BZF9 1416 aa17.11■□□□□ 0.33
NPIPB4-217ENST00000543449 KIAA0556O60303 1618 aa17.1■□□□□ 0.33
NPIPB4-217ENST00000543449 ABCC2Q92887 1545 aa17.09■□□□□ 0.33
NPIPB4-217ENST00000543449 TTBK1Q5TCY1 1321 aaPredicted RBP17.08■□□□□ 0.32
NPIPB4-217ENST00000543449 ABCC10Q5T3U5 1492 aa17.07■□□□□ 0.32
NPIPB4-217ENST00000543449 FAM69CQ0P6D2 419 aa17.04■□□□□ 0.32
NPIPB4-217ENST00000543449 PLB1Q6P1J6 1458 aa17.03■□□□□ 0.32
NPIPB4-217ENST00000543449 KIF21BO75037 1637 aa17.01■□□□□ 0.31
NPIPB4-217ENST00000543449 KDM5BQ9UGL1 1544 aa17.01■□□□□ 0.31
NPIPB4-217ENST00000543449 DIP2BQ9P265 1576 aa16.99■□□□□ 0.31
NPIPB4-217ENST00000543449 KIF13AQ9H1H9 1805 aa16.98■□□□□ 0.31
NPIPB4-217ENST00000543449 ASXL2Q76L83 1435 aa16.97■□□□□ 0.31
NPIPB4-217ENST00000543449 ABCA8O94911 1581 aa16.94■□□□□ 0.3
NPIPB4-217ENST00000543449 SAMD9Q5K651 1589 aa16.94■□□□□ 0.3
NPIPB4-217ENST00000543449 GLI2P10070 1586 aa16.93■□□□□ 0.3
NPIPB4-217ENST00000543449 ZCCHC11Q5TAX3 1644 aaKnown RBP16.91■□□□□ 0.3
NPIPB4-217ENST00000543449 EFCAB5A4FU69 1503 aa16.91■□□□□ 0.3
NPIPB4-217ENST00000543449 UBTFP17480 764 aaKnown RBP16.89■□□□□ 0.29
NPIPB4-217ENST00000543449 P3H3Q8IVL6 736 aa16.89■□□□□ 0.29
NPIPB4-217ENST00000543449 WDR7Q9Y4E6 1490 aa16.88■□□□□ 0.29
NPIPB4-217ENST00000543449 EPRSP07814 1512 aaKnown RBP16.87■□□□□ 0.29
NPIPB4-217ENST00000543449 TEX14Q8IWB6 1497 aa16.84■□□□□ 0.29
NPIPB4-217ENST00000543449 RAPGEF6Q8TEU7 1601 aa16.82■□□□□ 0.28
NPIPB4-217ENST00000543449 RANGAP1P46060 587 aaPredicted RBP16.82■□□□□ 0.28
NPIPB4-217ENST00000543449 FHOD3Q2V2M9 1422 aa16.81■□□□□ 0.28
NPIPB4-217ENST00000543449 ATP10BO94823 1461 aa16.8■□□□□ 0.28
NPIPB4-217ENST00000543449 KDM6BO15054 1643 aa16.79■□□□□ 0.28
NPIPB4-217ENST00000543449 MAP3K4Q9Y6R4 1608 aa16.78■□□□□ 0.28
NPIPB4-217ENST00000543449 FMN1Q68DA7 1419 aa16.78■□□□□ 0.28
NPIPB4-217ENST00000543449 TSPOAP1O95153 1857 aa16.78■□□□□ 0.28
NPIPB4-217ENST00000543449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.28
NPIPB4-217ENST00000543449 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.28
NPIPB4-217ENST00000543449 KCNH8Q96L42 1107 aa16.76■□□□□ 0.27
NPIPB4-217ENST00000543449 CD109Q6YHK3 1445 aa16.75■□□□□ 0.27
NPIPB4-217ENST00000543449 CFAP43Q8NDM7 1665 aa16.75■□□□□ 0.27
NPIPB4-217ENST00000543449 EHMT2Q96KQ7 1210 aa16.74■□□□□ 0.27
NPIPB4-217ENST00000543449 MAGI3Q5TCQ9 1506 aa16.74■□□□□ 0.27
NPIPB4-217ENST00000543449 NUP153P49790 1475 aaKnown RBP16.73■□□□□ 0.27
NPIPB4-217ENST00000543449 PLEKHD1A6NEE1 506 aa16.73■□□□□ 0.27
NPIPB4-217ENST00000543449 PPRC1Q5VV67 1664 aaKnown RBP16.72■□□□□ 0.27
NPIPB4-217ENST00000543449 ARID3CA6NKF2 412 aa16.71■□□□□ 0.27
NPIPB4-217ENST00000543449 ARHGAP35Q9NRY4 1499 aa16.7■□□□□ 0.26
NPIPB4-217ENST00000543449 PHLDB1Q86UU1 1377 aa16.7■□□□□ 0.26
NPIPB4-217ENST00000543449 CDK11AQ9UQ88 783 aaPredicted RBP16.68■□□□□ 0.26
NPIPB4-217ENST00000543449 HECW1Q76N89 1606 aa16.66■□□□□ 0.26
NPIPB4-217ENST00000543449 ABCA9Q8IUA7 1624 aa16.66■□□□□ 0.26
NPIPB4-217ENST00000543449 ATP1B4Q9UN42 357 aaPredicted RBP16.62■□□□□ 0.25
NPIPB4-217ENST00000543449 NEO1Q92859 1461 aa16.61■□□□□ 0.25
NPIPB4-217ENST00000543449 CLIP1P30622 1438 aa16.6■□□□□ 0.25
NPIPB4-217ENST00000543449 ARAP3Q8WWN8 1544 aa16.6■□□□□ 0.25
NPIPB4-217ENST00000543449 COL17A1Q9UMD9 1497 aaPredicted RBP16.59■□□□□ 0.25
NPIPB4-217ENST00000543449 CDK13Q14004 1512 aaKnown RBP16.57■□□□□ 0.24
NPIPB4-217ENST00000543449 CCDC18Q5T9S5 1454 aa16.57■□□□□ 0.24
NPIPB4-217ENST00000543449 CASKIN1Q8WXD9 1431 aa16.57■□□□□ 0.24
NPIPB4-217ENST00000543449 CFAP74Q9C0B2 1584 aa16.54■□□□□ 0.24
NPIPB4-217ENST00000543449 FYCO1Q9BQS8 1478 aa16.54■□□□□ 0.24
NPIPB4-217ENST00000543449 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.53■□□□□ 0.24
NPIPB4-217ENST00000543449 TROQ12816 1431 aaPredicted RBP16.53■□□□□ 0.24
NPIPB4-217ENST00000543449 FANCAO15360 1455 aa16.5■□□□□ 0.23
NPIPB4-217ENST00000543449 KIF14Q15058 1648 aa16.49■□□□□ 0.23
NPIPB4-217ENST00000543449 PLCH2O75038 1416 aa16.49■□□□□ 0.23
NPIPB4-217ENST00000543449 PCF11O94913 1555 aaKnown RBP16.49■□□□□ 0.23
NPIPB4-217ENST00000543449 AKNAQ7Z591 1439 aa16.49■□□□□ 0.23
NPIPB4-217ENST00000543449 DENND4BO75064 1496 aaPredicted RBP16.48■□□□□ 0.23
NPIPB4-217ENST00000543449 EFCAB2Q5VUJ9 269 aa16.47■□□□□ 0.23
NPIPB4-217ENST00000543449 TTC37Q6PGP7 1564 aa16.47■□□□□ 0.23
NPIPB4-217ENST00000543449 CEP162Q5TB80 1403 aa16.46■□□□□ 0.23
NPIPB4-217ENST00000543449 KDM4FA0A1W2PPD8 638 aa16.43■□□□□ 0.22
NPIPB4-217ENST00000543449 RAPGEF3O95398 923 aa16.43■□□□□ 0.22
NPIPB4-217ENST00000543449 MYO5CQ9NQX4 1742 aa16.42■□□□□ 0.22
NPIPB4-217ENST00000543449 ADGRL1O94910 1474 aa16.42■□□□□ 0.22
NPIPB4-217ENST00000543449 MAGI2Q86UL8 1455 aa16.41■□□□□ 0.22
NPIPB4-217ENST00000543449 LRRIQ1Q96JM4 1722 aa16.39■□□□□ 0.21
NPIPB4-217ENST00000543449 SCAPERQ9BY12 1400 aa16.38■□□□□ 0.21
NPIPB4-217ENST00000543449 ARHGAP5Q13017 1502 aa16.38■□□□□ 0.21
NPIPB4-217ENST00000543449 ZMYM4Q5VZL5 1548 aa16.37■□□□□ 0.21
NPIPB4-217ENST00000543449 FRMPD1Q5SYB0 1578 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms