RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 FAM9AQ8IZU1 332 aaPredicted RBP15.13■□□□□ 0.01
LDHA-220ENST00000542179 CSRNP3Q8WYN3 585 aa15.11■□□□□ 0.01
LDHA-220ENST00000542179 KIF27Q86VH2 1401 aa15.1■□□□□ 0.01
LDHA-220ENST00000542179 ABCA10Q8WWZ4 1543 aa15.09■□□□□ 0.01
LDHA-220ENST00000542179 THOC2Q8NI27 1593 aaKnown RBP15.09■□□□□ 0.01
LDHA-220ENST00000542179 CUX2O14529 1486 aa15.06■□□□□ 0
LDHA-220ENST00000542179 RAD54L2Q9Y4B4 1467 aa15.06■□□□□ 0
LDHA-220ENST00000542179 LOC105371045A0A1W2PR82 267 aa15.05■□□□□ -0
LDHA-220ENST00000542179 WDR97A6NE52 1622 aa15.03■□□□□ -0
LDHA-220ENST00000542179 TARBP1Q13395 1621 aaKnown RBP15.03■□□□□ -0
LDHA-220ENST00000542179 KIF21BO75037 1637 aa15□□□□□ -0.01
LDHA-220ENST00000542179 IFT140Q96RY7 1462 aa15□□□□□ -0.01
LDHA-220ENST00000542179 IGF1RP08069 1367 aa14.98□□□□□ -0.01
LDHA-220ENST00000542179 PRXQ9BXM0 1461 aa14.98□□□□□ -0.01
LDHA-220ENST00000542179 ABCA5Q8WWZ7 1642 aa14.96□□□□□ -0.01
LDHA-220ENST00000542179 ABCB7O75027 752 aa14.96□□□□□ -0.01
LDHA-220ENST00000542179 GOLGA3Q08378 1498 aa14.95□□□□□ -0.02
LDHA-220ENST00000542179 ERICH3Q5RHP9 1530 aa14.94□□□□□ -0.02
LDHA-220ENST00000542179 TDRD9Q8NDG6 1382 aaKnown RBP14.93□□□□□ -0.02
LDHA-220ENST00000542179 GAPVD1Q14C86 1478 aa14.93□□□□□ -0.02
LDHA-220ENST00000542179 TNIKQ9UKE5 1360 aa14.9□□□□□ -0.02
LDHA-220ENST00000542179 RAPGEF2Q9Y4G8 1499 aa14.89□□□□□ -0.03
LDHA-220ENST00000542179 CARMIL1Q5VZK9 1371 aa14.89□□□□□ -0.03
LDHA-220ENST00000542179 ZBTB22O15209 634 aa14.89□□□□□ -0.03
LDHA-220ENST00000542179 CUL7Q14999 1698 aa14.88□□□□□ -0.03
LDHA-220ENST00000542179 ZNF608Q9ULD9 1512 aaPredicted RBP14.87□□□□□ -0.03
LDHA-220ENST00000542179 AQRO60306 1485 aaKnown RBP eCLIP14.86□□□□□ -0.032e-8■■■■□ 26.4
LDHA-220ENST00000542179 GRIN2BQ13224 1484 aa14.85□□□□□ -0.03
LDHA-220ENST00000542179 UBTFP17480 764 aaKnown RBP14.85□□□□□ -0.03
LDHA-220ENST00000542179 EHMT2Q96KQ7 1210 aa14.85□□□□□ -0.03
LDHA-220ENST00000542179 PBRM1Q86U86 1689 aa14.84□□□□□ -0.03
LDHA-220ENST00000542179 EIF4G3O43432 1585 aaKnown RBP14.82□□□□□ -0.04
LDHA-220ENST00000542179 FHAD1B1AJZ9 1412 aa14.79□□□□□ -0.04
LDHA-220ENST00000542179 POLA2Q14181 598 aa14.78□□□□□ -0.04
LDHA-220ENST00000542179 ADAMTS12P58397 1594 aa14.77□□□□□ -0.05
LDHA-220ENST00000542179 CEP162Q5TB80 1403 aa14.76□□□□□ -0.05
LDHA-220ENST00000542179 MAGI1Q96QZ7 1491 aaPredicted RBP14.75□□□□□ -0.05
LDHA-220ENST00000542179 ATF5Q9Y2D1 282 aaPredicted RBP14.74□□□□□ -0.05
LDHA-220ENST00000542179 SNAPC4Q5SXM2 1469 aa14.73□□□□□ -0.05
LDHA-220ENST00000542179 ATXN8OSP0DMR3 200 aa14.72□□□□□ -0.05
LDHA-220ENST00000542179 CLIP1P30622 1438 aa14.69□□□□□ -0.06
LDHA-220ENST00000542179 SYNJ2O15056 1496 aa14.69□□□□□ -0.06
LDHA-220ENST00000542179 CTTNBP2Q8WZ74 1663 aa14.67□□□□□ -0.06
LDHA-220ENST00000542179 GRIN2AQ12879 1464 aa14.65□□□□□ -0.06
LDHA-220ENST00000542179 CHMP7Q8WUX9 453 aaPredicted RBP14.62□□□□□ -0.07
LDHA-220ENST00000542179 ARHGAP35Q9NRY4 1499 aa14.6□□□□□ -0.07
LDHA-220ENST00000542179 EFCAB5A4FU69 1503 aa14.59□□□□□ -0.07
LDHA-220ENST00000542179 KIAA0586Q9BVV6 1533 aa14.59□□□□□ -0.07
LDHA-220ENST00000542179 NUP160Q12769 1436 aa14.58□□□□□ -0.07
LDHA-220ENST00000542179 ZBTB12Q9Y330 459 aaPredicted RBP14.58□□□□□ -0.08
LDHA-220ENST00000542179 VPS8Q8N3P4 1428 aa14.57□□□□□ -0.08
LDHA-220ENST00000542179 ARAP1Q96P48 1450 aa14.57□□□□□ -0.08
LDHA-220ENST00000542179 IQGAP2Q13576 1575 aa14.56□□□□□ -0.08
LDHA-220ENST00000542179 RANGAP1P46060 587 aaPredicted RBP14.56□□□□□ -0.08
LDHA-220ENST00000542179 RBM42Q9BTD8 480 aaKnown RBP14.55□□□□□ -0.08
LDHA-220ENST00000542179 CEP170Q5SW79 1584 aa14.55□□□□□ -0.08
LDHA-220ENST00000542179 FBLN2P98095 1184 aa14.54□□□□□ -0.08
LDHA-220ENST00000542179 SAMD9Q5K651 1589 aa14.54□□□□□ -0.08
LDHA-220ENST00000542179 UGGT2Q9NYU1 1516 aa14.53□□□□□ -0.08
LDHA-220ENST00000542179 CHD1O14646 1710 aa14.52□□□□□ -0.09
LDHA-220ENST00000542179 FHOD3Q2V2M9 1422 aa14.45□□□□□ -0.1
LDHA-220ENST00000542179 FMN1Q68DA7 1419 aa14.45□□□□□ -0.1
LDHA-220ENST00000542179 JPH4Q96JJ6 628 aa14.44□□□□□ -0.1
LDHA-220ENST00000542179 DISP1Q96F81 1524 aa14.44□□□□□ -0.1
LDHA-220ENST00000542179 P3H3Q8IVL6 736 aa14.43□□□□□ -0.1
LDHA-220ENST00000542179 KIAA0556O60303 1618 aa14.42□□□□□ -0.1
LDHA-220ENST00000542179 CASKIN1Q8WXD9 1431 aa14.41□□□□□ -0.1
LDHA-220ENST00000542179 SHROOM2Q13796 1616 aa14.4□□□□□ -0.1
LDHA-220ENST00000542179 MAP3K1Q13233 1512 aa14.4□□□□□ -0.1
LDHA-220ENST00000542179 CLASP1Q7Z460 1538 aa14.4□□□□□ -0.1
LDHA-220ENST00000542179 CARMIL2Q6F5E8 1435 aa14.4□□□□□ -0.1
LDHA-220ENST00000542179 FYCO1Q9BQS8 1478 aa14.38□□□□□ -0.11
LDHA-220ENST00000542179 PCF11O94913 1555 aaKnown RBP14.36□□□□□ -0.11
LDHA-220ENST00000542179 PRG4Q92954 1404 aaPredicted RBP14.34□□□□□ -0.11
LDHA-220ENST00000542179 TIAM1Q13009 1591 aa14.32□□□□□ -0.12
LDHA-220ENST00000542179 TRIM26Q12899 539 aaPredicted RBP14.32□□□□□ -0.12
LDHA-220ENST00000542179 OSCARQ8IYS5 282 aa14.32□□□□□ -0.12
LDHA-220ENST00000542179 ILDR1Q86SU0 546 aaPredicted RBP14.31□□□□□ -0.12
LDHA-220ENST00000542179 CFAP43Q8NDM7 1665 aa14.3□□□□□ -0.12
LDHA-220ENST00000542179 PPARGC1BQ86YN6 1023 aaKnown RBP14.29□□□□□ -0.12
LDHA-220ENST00000542179 HECW1Q76N89 1606 aa14.29□□□□□ -0.12
LDHA-220ENST00000542179 CCDC18Q5T9S5 1454 aa14.27□□□□□ -0.12
LDHA-220ENST00000542179 KANK4Q5T7N3 995 aaPredicted RBP14.27□□□□□ -0.13
LDHA-220ENST00000542179 RAPGEF6Q8TEU7 1601 aa14.26□□□□□ -0.13
LDHA-220ENST00000542179 LRRC9Q6ZRR7 1453 aa14.26□□□□□ -0.13
LDHA-220ENST00000542179 PTPRGP23470 1445 aa14.25□□□□□ -0.13
LDHA-220ENST00000542179 LRRIQ1Q96JM4 1722 aa14.25□□□□□ -0.13
LDHA-220ENST00000542179 ATP1B4Q9UN42 357 aaPredicted RBP14.25□□□□□ -0.13
LDHA-220ENST00000542179 ABCA8O94911 1581 aa14.25□□□□□ -0.13
LDHA-220ENST00000542179 EPRSP07814 1512 aaKnown RBP14.24□□□□□ -0.13
LDHA-220ENST00000542179 ERCC6L2Q5T890 1561 aa14.23□□□□□ -0.13
LDHA-220ENST00000542179 AKT1S1Q96B36 256 aa14.23□□□□□ -0.13
LDHA-220ENST00000542179 NUP153P49790 1475 aaKnown RBP14.23□□□□□ -0.13
LDHA-220ENST00000542179 PLB1Q6P1J6 1458 aa14.22□□□□□ -0.13
LDHA-220ENST00000542179 PCGF6Q9BYE7 350 aa14.2□□□□□ -0.14
LDHA-220ENST00000542179 TTBK1Q5TCY1 1321 aaPredicted RBP14.19□□□□□ -0.14
LDHA-220ENST00000542179 POTEHQ6S545 545 aa14.19□□□□□ -0.14
LDHA-220ENST00000542179 UACAQ9BZF9 1416 aa14.18□□□□□ -0.14
LDHA-220ENST00000542179 EHBP1L1Q8N3D4 1523 aa14.16□□□□□ -0.14
LDHA-220ENST00000542179 MTUS2Q5JR59 1369 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms