RNA–Protein interactions for RNA: ENST00000542139.1

RAD9A-207, Transcript of RAD9 checkpoint clamp component A, humanhuman

TSL 4

Gene RAD9A, Length 578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9A-207ENST00000542139 TOP2BQ02880 1626 aa27.43■■□□□ 1.98
RAD9A-207ENST00000542139 BIVM-ERCC5R4GMW8 1640 aa27.42■■□□□ 1.98
RAD9A-207ENST00000542139 MAPKBP1O60336 1514 aa27.4■■□□□ 1.98
RAD9A-207ENST00000542139 KDM6BO15054 1643 aa27.38■■□□□ 1.97
RAD9A-207ENST00000542139 KDM4FA0A1W2PPD8 638 aa27.38■■□□□ 1.97
RAD9A-207ENST00000542139 DIP2BQ9P265 1576 aa27.38■■□□□ 1.97
RAD9A-207ENST00000542139 RUSC2Q8N2Y8 1516 aa27.32■■□□□ 1.96
RAD9A-207ENST00000542139 SUPT5HO00267 1087 aaKnown RBP27.32■■□□□ 1.96
RAD9A-207ENST00000542139 ILDR1Q86SU0 546 aaPredicted RBP27.3■■□□□ 1.96
RAD9A-207ENST00000542139 ADCY10Q96PN6 1610 aa27.29■■□□□ 1.96
RAD9A-207ENST00000542139 TSPOAP1O95153 1857 aa27.27■■□□□ 1.96
RAD9A-207ENST00000542139 KIAA0586Q9BVV6 1533 aa27.14■■□□□ 1.94
RAD9A-207ENST00000542139 TTBK1Q5TCY1 1321 aaPredicted RBP27.12■■□□□ 1.93
RAD9A-207ENST00000542139 PTPRGP23470 1445 aa27.07■■□□□ 1.92
RAD9A-207ENST00000542139 ADGRL1O94910 1474 aa27.02■■□□□ 1.92
RAD9A-207ENST00000542139 ABCC2Q92887 1545 aa26.99■■□□□ 1.91
RAD9A-207ENST00000542139 PLB1Q6P1J6 1458 aa26.99■■□□□ 1.91
RAD9A-207ENST00000542139 CUL7Q14999 1698 aa26.98■■□□□ 1.91
RAD9A-207ENST00000542139 CARMIL2Q6F5E8 1435 aa26.98■■□□□ 1.91
RAD9A-207ENST00000542139 IGF1RP08069 1367 aa26.97■■□□□ 1.91
RAD9A-207ENST00000542139 ASXL2Q76L83 1435 aa26.97■■□□□ 1.91
RAD9A-207ENST00000542139 TNIKQ9UKE5 1360 aa26.97■■□□□ 1.91
RAD9A-207ENST00000542139 KIF27Q86VH2 1401 aa26.96■■□□□ 1.91
RAD9A-207ENST00000542139 GLI2P10070 1586 aa26.94■■□□□ 1.9
RAD9A-207ENST00000542139 PPRC1Q5VV67 1664 aaKnown RBP26.9■■□□□ 1.9
RAD9A-207ENST00000542139 HECW2Q9P2P5 1572 aa26.86■■□□□ 1.89
RAD9A-207ENST00000542139 CARMIL1Q5VZK9 1371 aa26.84■■□□□ 1.89
RAD9A-207ENST00000542139 UHRF1BP1LA0JNW5 1464 aa26.83■■□□□ 1.89
RAD9A-207ENST00000542139 TEX14Q8IWB6 1497 aa26.83■■□□□ 1.89
RAD9A-207ENST00000542139 UACAQ9BZF9 1416 aa26.82■■□□□ 1.88
RAD9A-207ENST00000542139 COL17A1Q9UMD9 1497 aaPredicted RBP26.8■■□□□ 1.88
RAD9A-207ENST00000542139 EPRSP07814 1512 aaKnown RBP26.79■■□□□ 1.88
RAD9A-207ENST00000542139 IQGAP2Q13576 1575 aa26.79■■□□□ 1.88
RAD9A-207ENST00000542139 MAP3K4Q9Y6R4 1608 aa26.76■■□□□ 1.87
RAD9A-207ENST00000542139 KDM5BQ9UGL1 1544 aa26.71■■□□□ 1.87
RAD9A-207ENST00000542139 DISP1Q96F81 1524 aa26.67■■□□□ 1.86
RAD9A-207ENST00000542139 ZCCHC11Q5TAX3 1644 aaKnown RBP26.67■■□□□ 1.86
RAD9A-207ENST00000542139 WDR7Q9Y4E6 1490 aa26.6■■□□□ 1.85
RAD9A-207ENST00000542139 UGGT2Q9NYU1 1516 aa26.56■■□□□ 1.84
RAD9A-207ENST00000542139 FBXO41Q8TF61 875 aa26.56■■□□□ 1.84
RAD9A-207ENST00000542139 KIAA0556O60303 1618 aa26.54■■□□□ 1.84
RAD9A-207ENST00000542139 CD109Q6YHK3 1445 aa26.54■■□□□ 1.84
RAD9A-207ENST00000542139 KCNH8Q96L42 1107 aa26.52■■□□□ 1.84
RAD9A-207ENST00000542139 RAPGEF2Q9Y4G8 1499 aa26.5■■□□□ 1.83
RAD9A-207ENST00000542139 MAGI3Q5TCQ9 1506 aa26.49■■□□□ 1.83
RAD9A-207ENST00000542139 CFAP43Q8NDM7 1665 aa26.47■■□□□ 1.83
RAD9A-207ENST00000542139 KIF21BO75037 1637 aa26.43■■□□□ 1.82
RAD9A-207ENST00000542139 GOLGA3Q08378 1498 aa26.36■■□□□ 1.81
RAD9A-207ENST00000542139 FAM9AQ8IZU1 332 aaPredicted RBP26.33■■□□□ 1.81
RAD9A-207ENST00000542139 ABCA8O94911 1581 aa26.32■■□□□ 1.8
RAD9A-207ENST00000542139 PTPRMP28827 1452 aa26.3■■□□□ 1.8
RAD9A-207ENST00000542139 ARAP3Q8WWN8 1544 aa26.3■■□□□ 1.8
RAD9A-207ENST00000542139 CTTNBP2Q8WZ74 1663 aa26.28■■□□□ 1.8
RAD9A-207ENST00000542139 ARID3CA6NKF2 412 aa26.24■■□□□ 1.79
RAD9A-207ENST00000542139 PHLDB1Q86UU1 1377 aa26.23■■□□□ 1.79
RAD9A-207ENST00000542139 ARID4BQ4LE39 1312 aaPredicted RBP26.23■■□□□ 1.79
RAD9A-207ENST00000542139 ADAMTSL3P82987 1691 aa26.22■■□□□ 1.79
RAD9A-207ENST00000542139 RAPGEF3O95398 923 aa26.18■■□□□ 1.78
RAD9A-207ENST00000542139 PCF11O94913 1555 aaKnown RBP26.17■■□□□ 1.78
RAD9A-207ENST00000542139 ATP10BO94823 1461 aa26.12■■□□□ 1.77
RAD9A-207ENST00000542139 BCORL1Q5H9F3 1711 aa26.12■■□□□ 1.77
RAD9A-207ENST00000542139 ABCA9Q8IUA7 1624 aa26.12■■□□□ 1.77
RAD9A-207ENST00000542139 MADDQ8WXG6 1647 aa26.12■■□□□ 1.77
RAD9A-207ENST00000542139 P3H3Q8IVL6 736 aa26.11■■□□□ 1.77
RAD9A-207ENST00000542139 NEO1Q92859 1461 aa26.11■■□□□ 1.77
RAD9A-207ENST00000542139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.1■■□□□ 1.77
RAD9A-207ENST00000542139 HNRNPUL2Q1KMD3 747 aaKnown RBP26.1■■□□□ 1.77
RAD9A-207ENST00000542139 LMTK3Q96Q04 1460 aa26.1■■□□□ 1.77
RAD9A-207ENST00000542139 PLPPR3Q6T4P5 718 aa26.05■■□□□ 1.76
RAD9A-207ENST00000542139 HSPA2P54652 639 aa26.02■■□□□ 1.76
RAD9A-207ENST00000542139 RIMS1Q86UR5 1692 aaKnown RBP26.02■■□□□ 1.76
RAD9A-207ENST00000542139 FRMPD1Q5SYB0 1578 aa25.99■■□□□ 1.75
RAD9A-207ENST00000542139 PRXQ9BXM0 1461 aa25.99■■□□□ 1.75
RAD9A-207ENST00000542139 CERKQ8TCT0 537 aa25.96■■□□□ 1.75
RAD9A-207ENST00000542139 POGZQ7Z3K3 1410 aa25.96■■□□□ 1.75
RAD9A-207ENST00000542139 ARHGEF40Q8TER5 1519 aa25.95■■□□□ 1.74
RAD9A-207ENST00000542139 DENND4BO75064 1496 aaPredicted RBP25.95■■□□□ 1.74
RAD9A-207ENST00000542139 RAPGEF6Q8TEU7 1601 aa25.94■■□□□ 1.74
RAD9A-207ENST00000542139 FANCAO15360 1455 aa25.91■■□□□ 1.74
RAD9A-207ENST00000542139 AKNAQ7Z591 1439 aa25.9■■□□□ 1.74
RAD9A-207ENST00000542139 PLEKHD1A6NEE1 506 aa25.87■■□□□ 1.73
RAD9A-207ENST00000542139 RICTORQ6R327 1708 aa25.85■■□□□ 1.73
RAD9A-207ENST00000542139 MLECQ14165 292 aa25.85■■□□□ 1.73
RAD9A-207ENST00000542139 FHOD3Q2V2M9 1422 aa25.85■■□□□ 1.73
RAD9A-207ENST00000542139 SAMD9Q5K651 1589 aa25.85■■□□□ 1.73
RAD9A-207ENST00000542139 CFAP74Q9C0B2 1584 aa25.85■■□□□ 1.73
RAD9A-207ENST00000542139 DISP3Q9P2K9 1392 aa25.84■■□□□ 1.73
RAD9A-207ENST00000542139 NUP153P49790 1475 aaKnown RBP25.82■■□□□ 1.72
RAD9A-207ENST00000542139 EFCAB5A4FU69 1503 aa25.81■■□□□ 1.72
RAD9A-207ENST00000542139 ZFYVE16Q7Z3T8 1539 aa25.81■■□□□ 1.72
RAD9A-207ENST00000542139 RANGAP1P46060 587 aaPredicted RBP25.79■■□□□ 1.72
RAD9A-207ENST00000542139 ZMYM4Q5VZL5 1548 aa25.78■■□□□ 1.72
RAD9A-207ENST00000542139 YEATS2Q9ULM3 1422 aa25.77■■□□□ 1.72
RAD9A-207ENST00000542139 FER1L4A9Z1Z3 1794 aa25.76■■□□□ 1.71
RAD9A-207ENST00000542139 MAGI2Q86UL8 1455 aa25.75■■□□□ 1.71
RAD9A-207ENST00000542139 SOCS7O14512 581 aa25.75■■□□□ 1.71
RAD9A-207ENST00000542139 ILDR2Q71H61 639 aa25.73■■□□□ 1.71
RAD9A-207ENST00000542139 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.73■■□□□ 1.71
RAD9A-207ENST00000542139 DMRT2Q9Y5R5 561 aa25.72■■□□□ 1.71
RAD9A-207ENST00000542139 TTC37Q6PGP7 1564 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms