RNA–Protein interactions for RNA: ENST00000541982.5

CD4-210, Transcript of CD4 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-210ENST00000541982 NPM1P06748 294 aaKnown RBP eCLIP27.75■■■□□ 2.03
CD4-210ENST00000541982 RUSC2Q8N2Y8 1516 aa27.69■■■□□ 2.02
CD4-210ENST00000541982 FAM69CQ0P6D2 419 aa27.69■■■□□ 2.02
CD4-210ENST00000541982 ABCC10Q5T3U5 1492 aa27.69■■■□□ 2.02
CD4-210ENST00000541982 MAPKBP1O60336 1514 aa27.66■■■□□ 2.02
CD4-210ENST00000541982 DIP2BQ9P265 1576 aa27.58■■■□□ 2.01
CD4-210ENST00000541982 ADCY10Q96PN6 1610 aa27.57■■■□□ 2
CD4-210ENST00000541982 KIAA0586Q9BVV6 1533 aa27.55■■■□□ 2
CD4-210ENST00000541982 KDM6BO15054 1643 aa27.49■■□□□ 1.99
CD4-210ENST00000541982 CUL7Q14999 1698 aa27.47■■□□□ 1.99
CD4-210ENST00000541982 IGF1RP08069 1367 aa27.46■■□□□ 1.99
CD4-210ENST00000541982 KIF27Q86VH2 1401 aa27.45■■□□□ 1.98
CD4-210ENST00000541982 TSPOAP1O95153 1857 aa27.44■■□□□ 1.98
CD4-210ENST00000541982 PTPRGP23470 1445 aa27.38■■□□□ 1.97
CD4-210ENST00000541982 KDM4FA0A1W2PPD8 638 aa27.37■■□□□ 1.97
CD4-210ENST00000541982 CARMIL2Q6F5E8 1435 aa27.33■■□□□ 1.97
CD4-210ENST00000541982 TNIKQ9UKE5 1360 aa27.3■■□□□ 1.96
CD4-210ENST00000541982 CARMIL1Q5VZK9 1371 aa27.29■■□□□ 1.96
CD4-210ENST00000541982 ABCC2Q92887 1545 aa27.29■■□□□ 1.96
CD4-210ENST00000541982 TTBK1Q5TCY1 1321 aaPredicted RBP27.27■■□□□ 1.96
CD4-210ENST00000541982 PLB1Q6P1J6 1458 aa27.25■■□□□ 1.95
CD4-210ENST00000541982 GLI2P10070 1586 aa27.22■■□□□ 1.95
CD4-210ENST00000541982 ASXL2Q76L83 1435 aa27.22■■□□□ 1.95
CD4-210ENST00000541982 IQGAP2Q13576 1575 aa27.21■■□□□ 1.95
CD4-210ENST00000541982 UHRF1BP1LA0JNW5 1464 aa27.19■■□□□ 1.94
CD4-210ENST00000541982 PPRC1Q5VV67 1664 aaKnown RBP27.16■■□□□ 1.94
CD4-210ENST00000541982 UACAQ9BZF9 1416 aa27.16■■□□□ 1.94
CD4-210ENST00000541982 DISP1Q96F81 1524 aa27.08■■□□□ 1.93
CD4-210ENST00000541982 KDM5BQ9UGL1 1544 aa27.06■■□□□ 1.92
CD4-210ENST00000541982 ADGRL1O94910 1474 aa27.06■■□□□ 1.92
CD4-210ENST00000541982 TEX14Q8IWB6 1497 aa27.06■■□□□ 1.92
CD4-210ENST00000541982 EPRSP07814 1512 aaKnown RBP27.06■■□□□ 1.92
CD4-210ENST00000541982 MAP3K4Q9Y6R4 1608 aa27.04■■□□□ 1.92
CD4-210ENST00000541982 UGGT2Q9NYU1 1516 aa27.02■■□□□ 1.92
CD4-210ENST00000541982 RAPGEF2Q9Y4G8 1499 aa27■■□□□ 1.91
CD4-210ENST00000541982 ZCCHC11Q5TAX3 1644 aaKnown RBP26.99■■□□□ 1.91
CD4-210ENST00000541982 ILDR1Q86SU0 546 aaPredicted RBP26.99■■□□□ 1.91
CD4-210ENST00000541982 COL17A1Q9UMD9 1497 aaPredicted RBP26.99■■□□□ 1.91
CD4-210ENST00000541982 KIAA0556O60303 1618 aa26.95■■□□□ 1.91
CD4-210ENST00000541982 WDR7Q9Y4E6 1490 aa26.9■■□□□ 1.9
CD4-210ENST00000541982 HECW2Q9P2P5 1572 aa26.83■■□□□ 1.89
CD4-210ENST00000541982 GOLGA3Q08378 1498 aa26.81■■□□□ 1.88
CD4-210ENST00000541982 CTTNBP2Q8WZ74 1663 aa26.81■■□□□ 1.88
CD4-210ENST00000541982 CFAP43Q8NDM7 1665 aa26.8■■□□□ 1.88
CD4-210ENST00000541982 CD109Q6YHK3 1445 aa26.8■■□□□ 1.88
CD4-210ENST00000541982 MAGI3Q5TCQ9 1506 aa26.8■■□□□ 1.88
CD4-210ENST00000541982 KCNH8Q96L42 1107 aa26.75■■□□□ 1.87
CD4-210ENST00000541982 ABCA8O94911 1581 aa26.73■■□□□ 1.87
CD4-210ENST00000541982 FAM9AQ8IZU1 332 aaPredicted RBP26.7■■□□□ 1.86
CD4-210ENST00000541982 ARAP3Q8WWN8 1544 aa26.6■■□□□ 1.85
CD4-210ENST00000541982 KIF21BO75037 1637 aa26.59■■□□□ 1.85
CD4-210ENST00000541982 PRXQ9BXM0 1461 aa26.58■■□□□ 1.85
CD4-210ENST00000541982 PHLDB1Q86UU1 1377 aa26.57■■□□□ 1.84
CD4-210ENST00000541982 ATP10BO94823 1461 aa26.51■■□□□ 1.83
CD4-210ENST00000541982 ABCA9Q8IUA7 1624 aa26.49■■□□□ 1.83
CD4-210ENST00000541982 ARID3CA6NKF2 412 aa26.48■■□□□ 1.83
CD4-210ENST00000541982 P3H3Q8IVL6 736 aa26.46■■□□□ 1.83
CD4-210ENST00000541982 ADAMTSL3P82987 1691 aa26.43■■□□□ 1.82
CD4-210ENST00000541982 PTPRMP28827 1452 aa26.42■■□□□ 1.82
CD4-210ENST00000541982 NEO1Q92859 1461 aa26.42■■□□□ 1.82
CD4-210ENST00000541982 FBXO41Q8TF61 875 aa26.42■■□□□ 1.82
CD4-210ENST00000541982 RAPGEF3O95398 923 aa26.39■■□□□ 1.82
CD4-210ENST00000541982 RAPGEF6Q8TEU7 1601 aa26.38■■□□□ 1.81
CD4-210ENST00000541982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.37■■□□□ 1.81
CD4-210ENST00000541982 HNRNPUL2Q1KMD3 747 aaKnown RBP26.37■■□□□ 1.81
CD4-210ENST00000541982 SAMD9Q5K651 1589 aa26.37■■□□□ 1.81
CD4-210ENST00000541982 BCORL1Q5H9F3 1711 aa26.34■■□□□ 1.81
CD4-210ENST00000541982 ARID4BQ4LE39 1312 aaPredicted RBP26.33■■□□□ 1.81
CD4-210ENST00000541982 CSRNP3Q8WYN3 585 aa26.29■■□□□ 1.8
CD4-210ENST00000541982 FRMPD1Q5SYB0 1578 aa26.29■■□□□ 1.8
CD4-210ENST00000541982 MADDQ8WXG6 1647 aa26.27■■□□□ 1.8
CD4-210ENST00000541982 PCF11O94913 1555 aaKnown RBP26.26■■□□□ 1.79
CD4-210ENST00000541982 NUP153P49790 1475 aaKnown RBP26.25■■□□□ 1.79
CD4-210ENST00000541982 PLEKHD1A6NEE1 506 aa26.23■■□□□ 1.79
CD4-210ENST00000541982 DENND4BO75064 1496 aaPredicted RBP26.23■■□□□ 1.79
CD4-210ENST00000541982 ARHGEF40Q8TER5 1519 aa26.22■■□□□ 1.79
CD4-210ENST00000541982 CFAP74Q9C0B2 1584 aa26.2■■□□□ 1.79
CD4-210ENST00000541982 LMTK3Q96Q04 1460 aa26.2■■□□□ 1.78
CD4-210ENST00000541982 RICTORQ6R327 1708 aa26.19■■□□□ 1.78
CD4-210ENST00000541982 AKNAQ7Z591 1439 aa26.18■■□□□ 1.78
CD4-210ENST00000541982 RIMS1Q86UR5 1692 aaKnown RBP26.18■■□□□ 1.78
CD4-210ENST00000541982 FHOD3Q2V2M9 1422 aa26.17■■□□□ 1.78
CD4-210ENST00000541982 POGZQ7Z3K3 1410 aa26.17■■□□□ 1.78
CD4-210ENST00000541982 FANCAO15360 1455 aa26.16■■□□□ 1.78
CD4-210ENST00000541982 RANGAP1P46060 587 aaPredicted RBP26.14■■□□□ 1.78
CD4-210ENST00000541982 EEA1Q15075 1411 aa26.14■■□□□ 1.77
CD4-210ENST00000541982 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.11■■□□□ 1.77
CD4-210ENST00000541982 ZMYM4Q5VZL5 1548 aa26.1■■□□□ 1.77
CD4-210ENST00000541982 EFCAB5A4FU69 1503 aa26.09■■□□□ 1.77
CD4-210ENST00000541982 MAGI2Q86UL8 1455 aa26.09■■□□□ 1.77
CD4-210ENST00000541982 ZFYVE16Q7Z3T8 1539 aa26.08■■□□□ 1.77
CD4-210ENST00000541982 TTC37Q6PGP7 1564 aa26.05■■□□□ 1.76
CD4-210ENST00000541982 HSPA2P54652 639 aa26.03■■□□□ 1.76
CD4-210ENST00000541982 PLPPR3Q6T4P5 718 aa26.03■■□□□ 1.76
CD4-210ENST00000541982 YEATS2Q9ULM3 1422 aa26.02■■□□□ 1.76
CD4-210ENST00000541982 HECW1Q76N89 1606 aa25.99■■□□□ 1.75
CD4-210ENST00000541982 FER1L4A9Z1Z3 1794 aa25.99■■□□□ 1.75
CD4-210ENST00000541982 SIGLEC1Q9BZZ2 1709 aa25.97■■□□□ 1.75
CD4-210ENST00000541982 MLECQ14165 292 aa25.97■■□□□ 1.75
CD4-210ENST00000541982 PLCH2O75038 1416 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 525 ms