RNA–Protein interactions for RNA: ENST00000541970.5

PDCD2-208, Transcript of programmed cell death 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2, Length 3,378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-208ENST00000541970 ARAP1Q96P48 1450 aa23.76■■□□□ 1.39
PDCD2-208ENST00000541970 TDRD9Q8NDG6 1382 aaKnown RBP23.75■■□□□ 1.39
PDCD2-208ENST00000541970 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
PDCD2-208ENST00000541970 FGD5Q6ZNL6 1462 aa23.74■■□□□ 1.39
PDCD2-208ENST00000541970 PRXQ9BXM0 1461 aa23.73■■□□□ 1.39
PDCD2-208ENST00000541970 CC2D2AQ9P2K1 1620 aa23.72■■□□□ 1.39
PDCD2-208ENST00000541970 FANCD2Q9BXW9 1451 aa23.71■■□□□ 1.39
PDCD2-208ENST00000541970 TRIM52Q96A61 297 aa23.69■■□□□ 1.38
PDCD2-208ENST00000541970 FBLN2P98095 1184 aa23.66■■□□□ 1.38
PDCD2-208ENST00000541970 HIRIP3Q9BW71 556 aaPredicted RBP23.66■■□□□ 1.38
PDCD2-208ENST00000541970 PRKCSHP14314 528 aaPredicted RBP23.63■■□□□ 1.37
PDCD2-208ENST00000541970 DDX10Q13206 875 aaKnown RBP23.62■■□□□ 1.37
PDCD2-208ENST00000541970 CCNB3Q8WWL7 1395 aa23.61■■□□□ 1.37
PDCD2-208ENST00000541970 FHOD3Q2V2M9 1422 aa23.61■■□□□ 1.37
PDCD2-208ENST00000541970 ARHGAP35Q9NRY4 1499 aa23.6■■□□□ 1.37
PDCD2-208ENST00000541970 SIN3AQ96ST3 1273 aa23.59■■□□□ 1.37
PDCD2-208ENST00000541970 CHIC2Q9UKJ5 165 aa23.57■■□□□ 1.36
PDCD2-208ENST00000541970 MSH5O43196 834 aa23.57■■□□□ 1.36
PDCD2-208ENST00000541970 BIVM-ERCC5R4GMW8 1640 aa23.56■■□□□ 1.36
PDCD2-208ENST00000541970 IRX6P78412 446 aaPredicted RBP23.56■■□□□ 1.36
PDCD2-208ENST00000541970 ERICH3Q5RHP9 1530 aa23.51■■□□□ 1.35
PDCD2-208ENST00000541970 DHX57Q6P158 1386 aaKnown RBP23.48■■□□□ 1.35
PDCD2-208ENST00000541970 MTUS2Q5JR59 1369 aa23.47■■□□□ 1.35
PDCD2-208ENST00000541970 RAB3GAP2Q9H2M9 1393 aa23.43■■□□□ 1.34
PDCD2-208ENST00000541970 CDK11AQ9UQ88 783 aaPredicted RBP23.43■■□□□ 1.34
PDCD2-208ENST00000541970 RRP7BPQ9NSQ0 103 aa23.41■■□□□ 1.34
PDCD2-208ENST00000541970 POLA1P09884 1462 aaPredicted RBP23.41■■□□□ 1.34
PDCD2-208ENST00000541970 CNGB1Q14028 1251 aaPredicted RBP23.4■■□□□ 1.34
PDCD2-208ENST00000541970 PHLDB1Q86UU1 1377 aa23.39■■□□□ 1.34
PDCD2-208ENST00000541970 NBR1Q14596 966 aa23.38■■□□□ 1.33
PDCD2-208ENST00000541970 TOPBP1Q92547 1522 aa23.37■■□□□ 1.33
PDCD2-208ENST00000541970 DEKP35659 375 aaKnown RBP23.37■■□□□ 1.33
PDCD2-208ENST00000541970 FHAD1B1AJZ9 1412 aa23.34■■□□□ 1.33
PDCD2-208ENST00000541970 PDS5BQ9NTI5 1447 aa23.31■■□□□ 1.32
PDCD2-208ENST00000541970 ZNF777Q9ULD5 760 aaPredicted RBP23.3■■□□□ 1.32
PDCD2-208ENST00000541970 ANP32CO43423 234 aa23.3■■□□□ 1.32
PDCD2-208ENST00000541970 AQRO60306 1485 aaKnown RBP eCLIP23.26■■□□□ 1.319e-7■■■■■ 36.8
PDCD2-208ENST00000541970 ANO8Q9HCE9 1232 aaPredicted RBP23.24■■□□□ 1.31
PDCD2-208ENST00000541970 SETD5Q9C0A6 1442 aa23.24■■□□□ 1.31
PDCD2-208ENST00000541970 LRRC9Q6ZRR7 1453 aa23.23■■□□□ 1.31
PDCD2-208ENST00000541970 RRBP1Q9P2E9 1410 aaKnown RBP23.22■■□□□ 1.31
PDCD2-208ENST00000541970 GAPVD1Q14C86 1478 aa23.22■■□□□ 1.31
PDCD2-208ENST00000541970 HNRNPUQ00839 825 aaKnown RBP eCLIP23.22■■□□□ 1.31
PDCD2-208ENST00000541970 URB2Q14146 1524 aaKnown RBP23.21■■□□□ 1.31
PDCD2-208ENST00000541970 POLR3GLQ9BT43 218 aa23.2■■□□□ 1.3
PDCD2-208ENST00000541970 CHMP7Q8WUX9 453 aaPredicted RBP23.2■■□□□ 1.3
PDCD2-208ENST00000541970 DNMBPQ6XZF7 1577 aa23.18■■□□□ 1.3
PDCD2-208ENST00000541970 FOXD1Q16676 465 aa23.18■■□□□ 1.3
PDCD2-208ENST00000541970 FANCIQ9NVI1 1328 aa23.16■■□□□ 1.3
PDCD2-208ENST00000541970 TONSLQ96HA7 1378 aa23.16■■□□□ 1.3
PDCD2-208ENST00000541970 ZNF326Q5BKZ1 582 aaKnown RBP23.14■■□□□ 1.29
PDCD2-208ENST00000541970 TIAM1Q13009 1591 aa23.14■■□□□ 1.29
PDCD2-208ENST00000541970 ABCA10Q8WWZ4 1543 aa23.13■■□□□ 1.29
PDCD2-208ENST00000541970 RTN4Q9NQC3 1192 aaKnown RBP23.13■■□□□ 1.29
PDCD2-208ENST00000541970 FMN1Q68DA7 1419 aa23.11■■□□□ 1.29
PDCD2-208ENST00000541970 PCF11O94913 1555 aaKnown RBP23.11■■□□□ 1.29
PDCD2-208ENST00000541970 CCDC136Q96JN2 1154 aa23.1■■□□□ 1.29
PDCD2-208ENST00000541970 ERCC6Q03468 1493 aa23.07■■□□□ 1.28
PDCD2-208ENST00000541970 B4GALNT3Q6L9W6 998 aa23.06■■□□□ 1.28
PDCD2-208ENST00000541970 MYT1LQ9UL68 1186 aa23.04■■□□□ 1.28
PDCD2-208ENST00000541970 RTL5Q5HYW3 569 aaPredicted RBP23.03■■□□□ 1.28
PDCD2-208ENST00000541970 SALL2Q9Y467 1007 aaPredicted RBP23.02■■□□□ 1.28
PDCD2-208ENST00000541970 CASKIN1Q8WXD9 1431 aa23■■□□□ 1.27
PDCD2-208ENST00000541970 PPP1R15AO75807 674 aaPredicted RBP22.99■■□□□ 1.27
PDCD2-208ENST00000541970 NOP58Q9Y2X3 529 aaKnown RBP22.98■■□□□ 1.27
PDCD2-208ENST00000541970 ZNF644Q9H582 1327 aaPredicted RBP22.98■■□□□ 1.27
PDCD2-208ENST00000541970 CCER2I3L3R5 266 aa22.97■■□□□ 1.27
PDCD2-208ENST00000541970 FGD6Q6ZV73 1430 aa22.97■■□□□ 1.27
PDCD2-208ENST00000541970 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.96■■□□□ 1.27
PDCD2-208ENST00000541970 PAK3O75914 559 aaPredicted RBP22.95■■□□□ 1.27
PDCD2-208ENST00000541970 LAMC3Q9Y6N6 1575 aa22.94■■□□□ 1.26
PDCD2-208ENST00000541970 PRDM2Q13029 1718 aa22.94■■□□□ 1.26
PDCD2-208ENST00000541970 FYCO1Q9BQS8 1478 aa22.92■■□□□ 1.26
PDCD2-208ENST00000541970 ZNF608Q9ULD9 1512 aaPredicted RBP22.91■■□□□ 1.26
PDCD2-208ENST00000541970 SLC4A1APQ9BWU0 796 aaKnown RBP22.9■■□□□ 1.26
PDCD2-208ENST00000541970 NCOA2Q15596 1464 aa22.89■■□□□ 1.26
PDCD2-208ENST00000541970 PPP4R2Q9NY27 417 aa22.89■■□□□ 1.26
PDCD2-208ENST00000541970 CFDP1Q9UEE9 299 aaPredicted RBP22.89■■□□□ 1.26
PDCD2-208ENST00000541970 SENP3-EIF4A1A0A087X0R7 540 aa22.89■■□□□ 1.25
PDCD2-208ENST00000541970 IL27Q8NEV9 243 aa22.87■■□□□ 1.25
PDCD2-208ENST00000541970 FAM9BQ8IZU0 186 aa22.87■■□□□ 1.25
PDCD2-208ENST00000541970 WDR97A6NE52 1622 aa22.87■■□□□ 1.25
PDCD2-208ENST00000541970 CCDC18Q5T9S5 1454 aa22.86■■□□□ 1.25
PDCD2-208ENST00000541970 KIF21AQ7Z4S6 1674 aa22.85■■□□□ 1.25
PDCD2-208ENST00000541970 PTPRKQ15262 1439 aa22.84■■□□□ 1.25
PDCD2-208ENST00000541970 CDK13Q14004 1512 aaKnown RBP22.83■■□□□ 1.24
PDCD2-208ENST00000541970 EFCAB5A4FU69 1503 aa22.82■■□□□ 1.24
PDCD2-208ENST00000541970 MYOM3Q5VTT5 1437 aa22.82■■□□□ 1.24
PDCD2-208ENST00000541970 NPM2Q86SE8 214 aaKnown RBP22.81■■□□□ 1.24
PDCD2-208ENST00000541970 ANP32AP39687 249 aaKnown RBP22.81■■□□□ 1.24
PDCD2-208ENST00000541970 MAPKBP1O60336 1514 aa22.81■■□□□ 1.24
PDCD2-208ENST00000541970 MPHOSPH9Q99550 1183 aa22.81■■□□□ 1.24
PDCD2-208ENST00000541970 CUL7Q14999 1698 aa22.8■■□□□ 1.24
PDCD2-208ENST00000541970 JPH4Q96JJ6 628 aa22.79■■□□□ 1.24
PDCD2-208ENST00000541970 KDM2AQ9Y2K7 1162 aa22.78■■□□□ 1.24
PDCD2-208ENST00000541970 ZBTB47Q9UFB7 747 aaPredicted RBP22.77■■□□□ 1.24
PDCD2-208ENST00000541970 MRC2Q9UBG0 1479 aa22.77■■□□□ 1.24
PDCD2-208ENST00000541970 PLEKHD1A6NEE1 506 aa22.75■■□□□ 1.23
PDCD2-208ENST00000541970 GRIN2BQ13224 1484 aa22.75■■□□□ 1.23
PDCD2-208ENST00000541970 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms