RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 RUSC2Q8N2Y8 1516 aa23.25■■□□□ 1.31
SCARB1-207ENST00000541661 IGF1RP08069 1367 aa23.15■■□□□ 1.3
SCARB1-207ENST00000541661 KIAA0586Q9BVV6 1533 aa23.13■■□□□ 1.29
SCARB1-207ENST00000541661 ABCC10Q5T3U5 1492 aa23.13■■□□□ 1.29
SCARB1-207ENST00000541661 MAPKBP1O60336 1514 aa23.13■■□□□ 1.29
SCARB1-207ENST00000541661 NPM1P06748 294 aaKnown RBP eCLIP23.12■■□□□ 1.29
SCARB1-207ENST00000541661 CUL7Q14999 1698 aa23.12■■□□□ 1.29
SCARB1-207ENST00000541661 KIF27Q86VH2 1401 aa23.1■■□□□ 1.29
SCARB1-207ENST00000541661 ADCY10Q96PN6 1610 aa23.1■■□□□ 1.29
SCARB1-207ENST00000541661 FAM69CQ0P6D2 419 aa23.08■■□□□ 1.29
SCARB1-207ENST00000541661 DIP2BQ9P265 1576 aa23.05■■□□□ 1.28
SCARB1-207ENST00000541661 CARMIL1Q5VZK9 1371 aa22.97■■□□□ 1.27
SCARB1-207ENST00000541661 PTPRGP23470 1445 aa22.94■■□□□ 1.26
SCARB1-207ENST00000541661 CARMIL2Q6F5E8 1435 aa22.9■■□□□ 1.26
SCARB1-207ENST00000541661 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.26
SCARB1-207ENST00000541661 KDM6BO15054 1643 aa22.89■■□□□ 1.25
SCARB1-207ENST00000541661 TSPOAP1O95153 1857 aa22.88■■□□□ 1.25
SCARB1-207ENST00000541661 IQGAP2Q13576 1575 aa22.87■■□□□ 1.25
SCARB1-207ENST00000541661 ABCC2Q92887 1545 aa22.86■■□□□ 1.25
SCARB1-207ENST00000541661 UHRF1BP1LA0JNW5 1464 aa22.81■■□□□ 1.24
SCARB1-207ENST00000541661 TTBK1Q5TCY1 1321 aaPredicted RBP22.8■■□□□ 1.24
SCARB1-207ENST00000541661 PLB1Q6P1J6 1458 aa22.79■■□□□ 1.24
SCARB1-207ENST00000541661 DISP1Q96F81 1524 aa22.79■■□□□ 1.24
SCARB1-207ENST00000541661 GLI2P10070 1586 aa22.79■■□□□ 1.24
SCARB1-207ENST00000541661 ASXL2Q76L83 1435 aa22.78■■□□□ 1.24
SCARB1-207ENST00000541661 UACAQ9BZF9 1416 aa22.77■■□□□ 1.24
SCARB1-207ENST00000541661 KDM4FA0A1W2PPD8 638 aa22.76■■□□□ 1.23
SCARB1-207ENST00000541661 PPRC1Q5VV67 1664 aaKnown RBP22.74■■□□□ 1.23
SCARB1-207ENST00000541661 RAPGEF2Q9Y4G8 1499 aa22.74■■□□□ 1.23
SCARB1-207ENST00000541661 UGGT2Q9NYU1 1516 aa22.74■■□□□ 1.23
SCARB1-207ENST00000541661 KDM5BQ9UGL1 1544 aa22.71■■□□□ 1.23
SCARB1-207ENST00000541661 KIAA0556O60303 1618 aa22.66■■□□□ 1.22
SCARB1-207ENST00000541661 EPRSP07814 1512 aaKnown RBP22.66■■□□□ 1.22
SCARB1-207ENST00000541661 ZCCHC11Q5TAX3 1644 aaKnown RBP22.64■■□□□ 1.22
SCARB1-207ENST00000541661 MAP3K4Q9Y6R4 1608 aa22.64■■□□□ 1.22
SCARB1-207ENST00000541661 COL17A1Q9UMD9 1497 aaPredicted RBP22.59■■□□□ 1.21
SCARB1-207ENST00000541661 CTTNBP2Q8WZ74 1663 aa22.58■■□□□ 1.21
SCARB1-207ENST00000541661 TEX14Q8IWB6 1497 aa22.57■■□□□ 1.2
SCARB1-207ENST00000541661 WDR7Q9Y4E6 1490 aa22.54■■□□□ 1.2
SCARB1-207ENST00000541661 GOLGA3Q08378 1498 aa22.53■■□□□ 1.2
SCARB1-207ENST00000541661 ADGRL1O94910 1474 aa22.51■■□□□ 1.19
SCARB1-207ENST00000541661 ABCA8O94911 1581 aa22.49■■□□□ 1.19
SCARB1-207ENST00000541661 PRXQ9BXM0 1461 aa22.47■■□□□ 1.19
SCARB1-207ENST00000541661 CFAP43Q8NDM7 1665 aa22.45■■□□□ 1.18
SCARB1-207ENST00000541661 MAGI3Q5TCQ9 1506 aa22.44■■□□□ 1.18
SCARB1-207ENST00000541661 CD109Q6YHK3 1445 aa22.42■■□□□ 1.18
SCARB1-207ENST00000541661 KCNH8Q96L42 1107 aa22.38■■□□□ 1.17
SCARB1-207ENST00000541661 FAM9AQ8IZU1 332 aaPredicted RBP22.31■■□□□ 1.16
SCARB1-207ENST00000541661 ATP10BO94823 1461 aa22.29■■□□□ 1.16
SCARB1-207ENST00000541661 ARAP3Q8WWN8 1544 aa22.28■■□□□ 1.16
SCARB1-207ENST00000541661 HECW2Q9P2P5 1572 aa22.27■■□□□ 1.16
SCARB1-207ENST00000541661 SAMD9Q5K651 1589 aa22.25■■□□□ 1.15
SCARB1-207ENST00000541661 ILDR1Q86SU0 546 aaPredicted RBP22.25■■□□□ 1.15
SCARB1-207ENST00000541661 P3H3Q8IVL6 736 aa22.25■■□□□ 1.15
SCARB1-207ENST00000541661 CSRNP3Q8WYN3 585 aa22.24■■□□□ 1.15
SCARB1-207ENST00000541661 ABCA9Q8IUA7 1624 aa22.24■■□□□ 1.15
SCARB1-207ENST00000541661 PHLDB1Q86UU1 1377 aa22.22■■□□□ 1.15
SCARB1-207ENST00000541661 KIF21BO75037 1637 aa22.2■■□□□ 1.15
SCARB1-207ENST00000541661 ARID3CA6NKF2 412 aa22.2■■□□□ 1.14
SCARB1-207ENST00000541661 RAPGEF6Q8TEU7 1601 aa22.2■■□□□ 1.14
SCARB1-207ENST00000541661 NEO1Q92859 1461 aa22.14■■□□□ 1.13
SCARB1-207ENST00000541661 EEA1Q15075 1411 aa22.12■■□□□ 1.13
SCARB1-207ENST00000541661 NUP153P49790 1475 aaKnown RBP22.11■■□□□ 1.13
SCARB1-207ENST00000541661 RAPGEF3O95398 923 aa22.09■■□□□ 1.13
SCARB1-207ENST00000541661 ADAMTSL3P82987 1691 aa22.08■■□□□ 1.13
SCARB1-207ENST00000541661 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.08■■□□□ 1.13
SCARB1-207ENST00000541661 HNRNPUL2Q1KMD3 747 aaKnown RBP22.08■■□□□ 1.13
SCARB1-207ENST00000541661 FRMPD1Q5SYB0 1578 aa22.06■■□□□ 1.12
SCARB1-207ENST00000541661 FHOD3Q2V2M9 1422 aa22.04■■□□□ 1.12
SCARB1-207ENST00000541661 PTPRMP28827 1452 aa22.03■■□□□ 1.12
SCARB1-207ENST00000541661 PLEKHD1A6NEE1 506 aa22.02■■□□□ 1.12
SCARB1-207ENST00000541661 BCORL1Q5H9F3 1711 aa22■■□□□ 1.11
SCARB1-207ENST00000541661 RANGAP1P46060 587 aaPredicted RBP21.99■■□□□ 1.11
SCARB1-207ENST00000541661 EFCAB5A4FU69 1503 aa21.98■■□□□ 1.11
SCARB1-207ENST00000541661 RICTORQ6R327 1708 aa21.97■■□□□ 1.11
SCARB1-207ENST00000541661 AKNAQ7Z591 1439 aa21.96■■□□□ 1.11
SCARB1-207ENST00000541661 DENND4BO75064 1496 aaPredicted RBP21.96■■□□□ 1.11
SCARB1-207ENST00000541661 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.96■■□□□ 1.112e-7■■■■□ 22.7
SCARB1-207ENST00000541661 CFAP74Q9C0B2 1584 aa21.95■■□□□ 1.11
SCARB1-207ENST00000541661 FANCAO15360 1455 aa21.94■■□□□ 1.1
SCARB1-207ENST00000541661 ARHGEF40Q8TER5 1519 aa21.94■■□□□ 1.1
SCARB1-207ENST00000541661 MADDQ8WXG6 1647 aa21.94■■□□□ 1.1
SCARB1-207ENST00000541661 ARID4BQ4LE39 1312 aaPredicted RBP21.93■■□□□ 1.1
SCARB1-207ENST00000541661 TTC37Q6PGP7 1564 aa21.9■■□□□ 1.1
SCARB1-207ENST00000541661 ZMYM4Q5VZL5 1548 aa21.89■■□□□ 1.09
SCARB1-207ENST00000541661 PCF11O94913 1555 aaKnown RBP21.87■■□□□ 1.09
SCARB1-207ENST00000541661 CDK13Q14004 1512 aaKnown RBP21.85■■□□□ 1.09
SCARB1-207ENST00000541661 RIMS1Q86UR5 1692 aaKnown RBP21.85■■□□□ 1.09
SCARB1-207ENST00000541661 MAGI2Q86UL8 1455 aa21.84■■□□□ 1.09
SCARB1-207ENST00000541661 LMTK3Q96Q04 1460 aa21.84■■□□□ 1.09
SCARB1-207ENST00000541661 FBXO41Q8TF61 875 aa21.84■■□□□ 1.09
SCARB1-207ENST00000541661 PLCH2O75038 1416 aa21.82■■□□□ 1.08
SCARB1-207ENST00000541661 ZFYVE16Q7Z3T8 1539 aa21.82■■□□□ 1.08
SCARB1-207ENST00000541661 POGZQ7Z3K3 1410 aa21.81■■□□□ 1.08
SCARB1-207ENST00000541661 SIGLEC1Q9BZZ2 1709 aa21.81■■□□□ 1.08
SCARB1-207ENST00000541661 YEATS2Q9ULM3 1422 aa21.8■■□□□ 1.08
SCARB1-207ENST00000541661 HECW1Q76N89 1606 aa21.8■■□□□ 1.08
SCARB1-207ENST00000541661 FMN1Q68DA7 1419 aa21.78■■□□□ 1.08
SCARB1-207ENST00000541661 SCAPERQ9BY12 1400 aa21.78■■□□□ 1.08
SCARB1-207ENST00000541661 UBTFP17480 764 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms