RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 FBLN2P98095 1184 aa20.08■□□□□ 0.8
SMAD3-204ENST00000540846 KIAA0586Q9BVV6 1533 aa20.06■□□□□ 0.8
SMAD3-204ENST00000540846 UBTFP17480 764 aaKnown RBP20.06■□□□□ 0.8
SMAD3-204ENST00000540846 IQGAP2Q13576 1575 aa20.06■□□□□ 0.8
SMAD3-204ENST00000540846 CLASP1Q7Z460 1538 aa20.05■□□□□ 0.8
SMAD3-204ENST00000540846 SHROOM2Q13796 1616 aa19.99■□□□□ 0.79
SMAD3-204ENST00000540846 CEP162Q5TB80 1403 aa19.98■□□□□ 0.79
SMAD3-204ENST00000540846 UGGT2Q9NYU1 1516 aa19.97■□□□□ 0.79
SMAD3-204ENST00000540846 SAMD9Q5K651 1589 aa19.96■□□□□ 0.79
SMAD3-204ENST00000540846 ARHGAP35Q9NRY4 1499 aa19.92■□□□□ 0.78
SMAD3-204ENST00000540846 CLIP1P30622 1438 aa19.92■□□□□ 0.78
SMAD3-204ENST00000540846 EFCAB5A4FU69 1503 aa19.91■□□□□ 0.78
SMAD3-204ENST00000540846 DISP1Q96F81 1524 aa19.9■□□□□ 0.78
SMAD3-204ENST00000540846 OSCARQ8IYS5 282 aa19.88■□□□□ 0.77
SMAD3-204ENST00000540846 KIAA0556O60303 1618 aa19.88■□□□□ 0.77
SMAD3-204ENST00000540846 ARAP1Q96P48 1450 aa19.85■□□□□ 0.77
SMAD3-204ENST00000540846 JPH4Q96JJ6 628 aa19.85■□□□□ 0.77
SMAD3-204ENST00000540846 ERCC6L2Q5T890 1561 aa19.84■□□□□ 0.77
SMAD3-204ENST00000540846 RANGAP1P46060 587 aaPredicted RBP19.83■□□□□ 0.76
SMAD3-204ENST00000540846 PRG4Q92954 1404 aaPredicted RBP19.8■□□□□ 0.76
SMAD3-204ENST00000540846 FHOD3Q2V2M9 1422 aa19.79■□□□□ 0.76
SMAD3-204ENST00000540846 CARMIL2Q6F5E8 1435 aa19.75■□□□□ 0.75
SMAD3-204ENST00000540846 P3H3Q8IVL6 736 aa19.72■□□□□ 0.75
SMAD3-204ENST00000540846 VPS8Q8N3P4 1428 aa19.71■□□□□ 0.75
SMAD3-204ENST00000540846 PCF11O94913 1555 aaKnown RBP19.69■□□□□ 0.74
SMAD3-204ENST00000540846 ARHGEF11O15085 1522 aa19.68■□□□□ 0.74
SMAD3-204ENST00000540846 FMN1Q68DA7 1419 aa19.67■□□□□ 0.74
SMAD3-204ENST00000540846 RIMBP3CA6NJZ7 1639 aa19.65■□□□□ 0.74
SMAD3-204ENST00000540846 RIMBP3BA6NNM3 1639 aa19.65■□□□□ 0.74
SMAD3-204ENST00000540846 RIMBP3Q9UFD9 1639 aa19.65■□□□□ 0.74
SMAD3-204ENST00000540846 ABCA8O94911 1581 aa19.63■□□□□ 0.73
SMAD3-204ENST00000540846 LRRIQ1Q96JM4 1722 aa19.63■□□□□ 0.73
SMAD3-204ENST00000540846 RAPGEF6Q8TEU7 1601 aa19.61■□□□□ 0.73
SMAD3-204ENST00000540846 FYCO1Q9BQS8 1478 aa19.61■□□□□ 0.73
SMAD3-204ENST00000540846 PTPRGP23470 1445 aa19.61■□□□□ 0.73
SMAD3-204ENST00000540846 CASKIN1Q8WXD9 1431 aa19.61■□□□□ 0.73
SMAD3-204ENST00000540846 PLB1Q6P1J6 1458 aa19.6■□□□□ 0.73
SMAD3-204ENST00000540846 HECW1Q76N89 1606 aa19.57■□□□□ 0.72
SMAD3-204ENST00000540846 NUP153P49790 1475 aaKnown RBP19.55■□□□□ 0.72
SMAD3-204ENST00000540846 CFAP43Q8NDM7 1665 aa19.53■□□□□ 0.72
SMAD3-204ENST00000540846 ABCC2Q92887 1545 aa19.53■□□□□ 0.72
SMAD3-204ENST00000540846 TRIM26Q12899 539 aaPredicted RBP19.53■□□□□ 0.72
SMAD3-204ENST00000540846 ADCY10Q96PN6 1610 aa19.53■□□□□ 0.72
SMAD3-204ENST00000540846 TTBK1Q5TCY1 1321 aaPredicted RBP19.52■□□□□ 0.72
SMAD3-204ENST00000540846 UACAQ9BZF9 1416 aa19.52■□□□□ 0.72
SMAD3-204ENST00000540846 UHRF1BP1LA0JNW5 1464 aa19.52■□□□□ 0.71
SMAD3-204ENST00000540846 PCGF6Q9BYE7 350 aa19.51■□□□□ 0.71
SMAD3-204ENST00000540846 MAP3K1Q13233 1512 aa19.49■□□□□ 0.71
SMAD3-204ENST00000540846 TIAM1Q13009 1591 aa19.49■□□□□ 0.71
SMAD3-204ENST00000540846 EPRSP07814 1512 aaKnown RBP19.49■□□□□ 0.71
SMAD3-204ENST00000540846 CDK13Q14004 1512 aaKnown RBP19.47■□□□□ 0.71
SMAD3-204ENST00000540846 CCDC18Q5T9S5 1454 aa19.45■□□□□ 0.7
SMAD3-204ENST00000540846 KDM5BQ9UGL1 1544 aa19.44■□□□□ 0.7
SMAD3-204ENST00000540846 ATP10BO94823 1461 aa19.43■□□□□ 0.7
SMAD3-204ENST00000540846 ZCCHC11Q5TAX3 1644 aaKnown RBP19.43■□□□□ 0.7
SMAD3-204ENST00000540846 DNAJC5Q9H3Z4 198 aa19.43■□□□□ 0.7
SMAD3-204ENST00000540846 MAGI3Q5TCQ9 1506 aa19.41■□□□□ 0.7
SMAD3-204ENST00000540846 ATP1B4Q9UN42 357 aaPredicted RBP19.37■□□□□ 0.69
SMAD3-204ENST00000540846 LRRC9Q6ZRR7 1453 aa19.36■□□□□ 0.69
SMAD3-204ENST00000540846 ARID3CA6NKF2 412 aa19.35■□□□□ 0.69
SMAD3-204ENST00000540846 CYB5RLQ6IPT4 315 aa19.35■□□□□ 0.69
SMAD3-204ENST00000540846 KANK4Q5T7N3 995 aaPredicted RBP19.34■□□□□ 0.69
SMAD3-204ENST00000540846 EHBP1L1Q8N3D4 1523 aa19.33■□□□□ 0.68
SMAD3-204ENST00000540846 APLP2Q06481 763 aa19.29■□□□□ 0.68
SMAD3-204ENST00000540846 PPARGC1BQ86YN6 1023 aaKnown RBP19.29■□□□□ 0.68
SMAD3-204ENST00000540846 TROQ12816 1431 aaPredicted RBP19.28■□□□□ 0.68
SMAD3-204ENST00000540846 KIF14Q15058 1648 aa19.27■□□□□ 0.68
SMAD3-204ENST00000540846 MAPKBP1O60336 1514 aa19.26■□□□□ 0.67
SMAD3-204ENST00000540846 SUPT6HQ7KZ85 1726 aaKnown RBP19.26■□□□□ 0.67
SMAD3-204ENST00000540846 MTUS2Q5JR59 1369 aa19.25■□□□□ 0.67
SMAD3-204ENST00000540846 ASXL2Q76L83 1435 aa19.23■□□□□ 0.67
SMAD3-204ENST00000540846 WDR7Q9Y4E6 1490 aa19.23■□□□□ 0.67
SMAD3-204ENST00000540846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.22■□□□□ 0.67
SMAD3-204ENST00000540846 HNRNPUL2Q1KMD3 747 aaKnown RBP19.22■□□□□ 0.67
SMAD3-204ENST00000540846 CDK11AQ9UQ88 783 aaPredicted RBP19.21■□□□□ 0.67
SMAD3-204ENST00000540846 NCOA2Q15596 1464 aa19.21■□□□□ 0.67
SMAD3-204ENST00000540846 ABCC10Q5T3U5 1492 aa19.19■□□□□ 0.66
SMAD3-204ENST00000540846 PLEKHD1A6NEE1 506 aa19.19■□□□□ 0.66
SMAD3-204ENST00000540846 TTC37Q6PGP7 1564 aa19.17■□□□□ 0.66
SMAD3-204ENST00000540846 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.17■□□□□ 0.66
SMAD3-204ENST00000540846 PHLDB1Q86UU1 1377 aa19.16■□□□□ 0.66
SMAD3-204ENST00000540846 NPM1P06748 294 aaKnown RBP eCLIP19.15■□□□□ 0.66
SMAD3-204ENST00000540846 CDC42BPAQ5VT25 1732 aa19.15■□□□□ 0.66
SMAD3-204ENST00000540846 ABCA9Q8IUA7 1624 aa19.14■□□□□ 0.66
SMAD3-204ENST00000540846 HRCP23327 699 aa19.14■□□□□ 0.65
SMAD3-204ENST00000540846 DIP2BQ9P265 1576 aa19.12■□□□□ 0.65
SMAD3-204ENST00000540846 ITSN2Q9NZM3 1697 aa19.11■□□□□ 0.65
SMAD3-204ENST00000540846 PREX2Q70Z35 1606 aa19.11■□□□□ 0.65
SMAD3-204ENST00000540846 MYO5CQ9NQX4 1742 aa19.1■□□□□ 0.65
SMAD3-204ENST00000540846 CDC42BPBQ9Y5S2 1711 aa19.1■□□□□ 0.65
SMAD3-204ENST00000540846 MYOM3Q5VTT5 1437 aa19.09■□□□□ 0.65
SMAD3-204ENST00000540846 GLI2P10070 1586 aa19.09■□□□□ 0.65
SMAD3-204ENST00000540846 KIF13AQ9H1H9 1805 aa19.09■□□□□ 0.65
SMAD3-204ENST00000540846 GPATCH8Q9UKJ3 1502 aaKnown RBP19.09■□□□□ 0.65
SMAD3-204ENST00000540846 RRBP1Q9P2E9 1410 aaKnown RBP19.06■□□□□ 0.64
SMAD3-204ENST00000540846 MAP3K4Q9Y6R4 1608 aa19.06■□□□□ 0.64
SMAD3-204ENST00000540846 KCNH8Q96L42 1107 aa19.06■□□□□ 0.64
SMAD3-204ENST00000540846 FGD6Q6ZV73 1430 aa19.05■□□□□ 0.64
SMAD3-204ENST00000540846 CCNB3Q8WWL7 1395 aa19.04■□□□□ 0.64
SMAD3-204ENST00000540846 ARAP3Q8WWN8 1544 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms