RNA–Protein interactions for RNA: ENST00000540768.5

NUP85-203, Transcript of nucleoporin 85, humanhuman

TSL 2 BASIC

Gene NUP85, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-203ENST00000540768 EIF4G3O43432 1585 aaKnown RBP14.91□□□□□ -0.02
NUP85-203ENST00000540768 CYB5RLQ6IPT4 315 aa14.9□□□□□ -0.02
NUP85-203ENST00000540768 RAD54L2Q9Y4B4 1467 aa14.89□□□□□ -0.03
NUP85-203ENST00000540768 ABCA10Q8WWZ4 1543 aa14.88□□□□□ -0.03
NUP85-203ENST00000540768 ARHGEF11O15085 1522 aa14.87□□□□□ -0.03
NUP85-203ENST00000540768 TARBP1Q13395 1621 aaKnown RBP14.87□□□□□ -0.03
NUP85-203ENST00000540768 RIMBP3CA6NJZ7 1639 aa14.87□□□□□ -0.03
NUP85-203ENST00000540768 RIMBP3BA6NNM3 1639 aa14.87□□□□□ -0.03
NUP85-203ENST00000540768 RIMBP3Q9UFD9 1639 aa14.87□□□□□ -0.03
NUP85-203ENST00000540768 RRBP1Q9P2E9 1410 aaKnown RBP14.85□□□□□ -0.03
NUP85-203ENST00000540768 CHMP7Q8WUX9 453 aaPredicted RBP14.82□□□□□ -0.04
NUP85-203ENST00000540768 MAP3K1Q13233 1512 aa14.82□□□□□ -0.04
NUP85-203ENST00000540768 DIEXFQ68CQ4 756 aaKnown RBP14.79□□□□□ -0.04
NUP85-203ENST00000540768 TIAM1Q13009 1591 aa14.78□□□□□ -0.04
NUP85-203ENST00000540768 WDR97A6NE52 1622 aa14.77□□□□□ -0.04
NUP85-203ENST00000540768 CUL7Q14999 1698 aa14.77□□□□□ -0.04
NUP85-203ENST00000540768 SNAPC4Q5SXM2 1469 aa14.77□□□□□ -0.05
NUP85-203ENST00000540768 ZNF316A6NFI3 1004 aaPredicted RBP14.76□□□□□ -0.05
NUP85-203ENST00000540768 CCNB3Q8WWL7 1395 aa14.75□□□□□ -0.05
NUP85-203ENST00000540768 TRHP20396 242 aaPredicted RBP14.75□□□□□ -0.05
NUP85-203ENST00000540768 CHD1O14646 1710 aa14.74□□□□□ -0.05
NUP85-203ENST00000540768 DHX57Q6P158 1386 aaKnown RBP14.74□□□□□ -0.05
NUP85-203ENST00000540768 FHAD1B1AJZ9 1412 aa14.74□□□□□ -0.05
NUP85-203ENST00000540768 CLSPNQ9HAW4 1339 aa14.74□□□□□ -0.05
NUP85-203ENST00000540768 GRIN2BQ13224 1484 aa14.73□□□□□ -0.05
NUP85-203ENST00000540768 LRRC9Q6ZRR7 1453 aa14.72□□□□□ -0.05
NUP85-203ENST00000540768 EFCAB5A4FU69 1503 aa14.71□□□□□ -0.05
NUP85-203ENST00000540768 ABCA5Q8WWZ7 1642 aa14.71□□□□□ -0.05
NUP85-203ENST00000540768 MAGI1Q96QZ7 1491 aaPredicted RBP14.71□□□□□ -0.05
NUP85-203ENST00000540768 PCF11O94913 1555 aaKnown RBP14.7□□□□□ -0.06
NUP85-203ENST00000540768 CTTNBP2Q8WZ74 1663 aa14.7□□□□□ -0.06
NUP85-203ENST00000540768 CFAP43Q8NDM7 1665 aa14.7□□□□□ -0.06
NUP85-203ENST00000540768 SYNJ2O15056 1496 aa14.69□□□□□ -0.06
NUP85-203ENST00000540768 GAPVD1Q14C86 1478 aa14.69□□□□□ -0.06
NUP85-203ENST00000540768 FHOD3Q2V2M9 1422 aa14.67□□□□□ -0.06
NUP85-203ENST00000540768 P3H3Q8IVL6 736 aa14.66□□□□□ -0.06
NUP85-203ENST00000540768 FYCO1Q9BQS8 1478 aa14.66□□□□□ -0.06
NUP85-203ENST00000540768 CASKIN1Q8WXD9 1431 aa14.65□□□□□ -0.06
NUP85-203ENST00000540768 PHLDB1Q86UU1 1377 aa14.65□□□□□ -0.06
NUP85-203ENST00000540768 CLASP1Q7Z460 1538 aa14.64□□□□□ -0.07
NUP85-203ENST00000540768 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
NUP85-203ENST00000540768 SAMD9Q5K651 1589 aa14.6□□□□□ -0.07
NUP85-203ENST00000540768 FMN1Q68DA7 1419 aa14.59□□□□□ -0.07
NUP85-203ENST00000540768 ITGAEP38570 1179 aa14.58□□□□□ -0.08
NUP85-203ENST00000540768 ACIN1Q9UKV3 1341 aaKnown RBP14.58□□□□□ -0.08
NUP85-203ENST00000540768 RAB3GAP2Q9H2M9 1393 aa14.57□□□□□ -0.08
NUP85-203ENST00000540768 SETD5Q9C0A6 1442 aa14.55□□□□□ -0.08
NUP85-203ENST00000540768 NEUROD1Q13562 356 aa14.54□□□□□ -0.08
NUP85-203ENST00000540768 ATP1B4Q9UN42 357 aaPredicted RBP14.54□□□□□ -0.08
NUP85-203ENST00000540768 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.54□□□□□ -0.08
NUP85-203ENST00000540768 GRIN2AQ12879 1464 aa14.53□□□□□ -0.08
NUP85-203ENST00000540768 MAPKBP1O60336 1514 aa14.53□□□□□ -0.08
NUP85-203ENST00000540768 PBRM1Q86U86 1689 aa14.53□□□□□ -0.08
NUP85-203ENST00000540768 LRRIQ1Q96JM4 1722 aa14.51□□□□□ -0.09
NUP85-203ENST00000540768 FAM50AQ14320 339 aaKnown RBP14.51□□□□□ -0.09
NUP85-203ENST00000540768 MIER1Q8N108 512 aa14.5□□□□□ -0.09
NUP85-203ENST00000540768 CENPBP07199 599 aaPredicted RBP14.49□□□□□ -0.09
NUP85-203ENST00000540768 NUP160Q12769 1436 aa14.48□□□□□ -0.09
NUP85-203ENST00000540768 ADAMTS12P58397 1594 aa14.48□□□□□ -0.09
NUP85-203ENST00000540768 FGD6Q6ZV73 1430 aa14.47□□□□□ -0.09
NUP85-203ENST00000540768 MTUS2Q5JR59 1369 aa14.45□□□□□ -0.1
NUP85-203ENST00000540768 ERCC6L2Q5T890 1561 aa14.44□□□□□ -0.1
NUP85-203ENST00000540768 CEP170Q5SW79 1584 aa14.44□□□□□ -0.1
NUP85-203ENST00000540768 JPH4Q96JJ6 628 aa14.43□□□□□ -0.1
NUP85-203ENST00000540768 IQGAP2Q13576 1575 aa14.43□□□□□ -0.1
NUP85-203ENST00000540768 NCOA2Q15596 1464 aa14.42□□□□□ -0.1
NUP85-203ENST00000540768 EHBP1L1Q8N3D4 1523 aa14.42□□□□□ -0.1
NUP85-203ENST00000540768 SUPT6HQ7KZ85 1726 aaKnown RBP14.4□□□□□ -0.1
NUP85-203ENST00000540768 MYOM3Q5VTT5 1437 aa14.4□□□□□ -0.1
NUP85-203ENST00000540768 PRG4Q92954 1404 aaPredicted RBP14.39□□□□□ -0.11
NUP85-203ENST00000540768 CCDC18Q5T9S5 1454 aa14.39□□□□□ -0.11
NUP85-203ENST00000540768 MAGI3Q5TCQ9 1506 aa14.39□□□□□ -0.11
NUP85-203ENST00000540768 PTPRKQ15262 1439 aa14.39□□□□□ -0.11
NUP85-203ENST00000540768 UGGT2Q9NYU1 1516 aa14.38□□□□□ -0.11
NUP85-203ENST00000540768 HECW1Q76N89 1606 aa14.38□□□□□ -0.11
NUP85-203ENST00000540768 HFM1A2PYH4 1435 aa14.37□□□□□ -0.11
NUP85-203ENST00000540768 GTF3C3Q9Y5Q9 886 aa14.35□□□□□ -0.11
NUP85-203ENST00000540768 SIN3AQ96ST3 1273 aa14.35□□□□□ -0.11
NUP85-203ENST00000540768 EPRSP07814 1512 aaKnown RBP14.34□□□□□ -0.11
NUP85-203ENST00000540768 TIMELESSQ9UNS1 1208 aa14.34□□□□□ -0.11
NUP85-203ENST00000540768 SHROOM2Q13796 1616 aa14.34□□□□□ -0.11
NUP85-203ENST00000540768 PTPN23Q9H3S7 1636 aa14.34□□□□□ -0.11
NUP85-203ENST00000540768 YTHDC1Q96MU7 727 aaKnown RBP14.33□□□□□ -0.11
NUP85-203ENST00000540768 TCOF1Q13428 1488 aaKnown RBP14.32□□□□□ -0.12
NUP85-203ENST00000540768 KIAA0586Q9BVV6 1533 aa14.32□□□□□ -0.12
NUP85-203ENST00000540768 AEBP2Q6ZN18 517 aaPredicted RBP14.32□□□□□ -0.12
NUP85-203ENST00000540768 NAIPQ13075 1403 aa14.32□□□□□ -0.12
NUP85-203ENST00000540768 NPM1P06748 294 aaKnown RBP eCLIP14.31□□□□□ -0.12
NUP85-203ENST00000540768 UACAQ9BZF9 1416 aa14.3□□□□□ -0.12
NUP85-203ENST00000540768 DISP1Q96F81 1524 aa14.3□□□□□ -0.12
NUP85-203ENST00000540768 CDK13Q14004 1512 aaKnown RBP14.29□□□□□ -0.12
NUP85-203ENST00000540768 KIAA0556O60303 1618 aa14.29□□□□□ -0.12
NUP85-203ENST00000540768 MIA2Q96PC5 1412 aa14.26□□□□□ -0.13
NUP85-203ENST00000540768 PPP1R15AO75807 674 aaPredicted RBP14.26□□□□□ -0.13
NUP85-203ENST00000540768 FAM69CQ0P6D2 419 aa14.26□□□□□ -0.13
NUP85-203ENST00000540768 AKNAQ7Z591 1439 aa14.24□□□□□ -0.13
NUP85-203ENST00000540768 GCC2Q8IWJ2 1684 aa14.23□□□□□ -0.13
NUP85-203ENST00000540768 NUP153P49790 1475 aaKnown RBP14.22□□□□□ -0.13
NUP85-203ENST00000540768 RAPGEF6Q8TEU7 1601 aa14.21□□□□□ -0.13
NUP85-203ENST00000540768 ARID3CA6NKF2 412 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 212.8 ms