RNA–Protein interactions for RNA: ENST00000540768.5

NUP85-203, Transcript of nucleoporin 85, humanhuman

TSL 2 BASIC

Gene NUP85, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-203ENST00000540768 NISCHQ9Y2I1 1504 aa21.14■□□□□ 0.98
NUP85-203ENST00000540768 ABCC9O60706 1549 aa18.42■□□□□ 0.54
NUP85-203ENST00000540768 CCDC180Q9P1Z9 1646 aa18.2■□□□□ 0.5
NUP85-203ENST00000540768 ZCCHC6Q5VYS8 1495 aaKnown RBP17.86■□□□□ 0.45
NUP85-203ENST00000540768 SHROOM4Q9ULL8 1493 aa17.71■□□□□ 0.43
NUP85-203ENST00000540768 DCAF8L2P0C7V8 631 aa17.45■□□□□ 0.38
NUP85-203ENST00000540768 DCAF1Q9Y4B6 1507 aa17.43■□□□□ 0.38
NUP85-203ENST00000540768 RB1CC1Q8TDY2 1594 aa17.43■□□□□ 0.38
NUP85-203ENST00000540768 DNAJC5BQ9UF47 199 aa17.37■□□□□ 0.37
NUP85-203ENST00000540768 NACADO15069 1562 aa17.31■□□□□ 0.36
NUP85-203ENST00000540768 SUPT5HO00267 1087 aaKnown RBP17.29■□□□□ 0.36
NUP85-203ENST00000540768 PABPN1Q86U42 306 aaKnown RBP eCLIP17.23■□□□□ 0.356e-11■■■□□ 15.6
NUP85-203ENST00000540768 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
NUP85-203ENST00000540768 BICRAQ9NZM4 1560 aa16.91■□□□□ 0.3
NUP85-203ENST00000540768 UNC13AQ9UPW8 1703 aa16.89■□□□□ 0.3
NUP85-203ENST00000540768 CHIC1Q5VXU3 224 aa16.84■□□□□ 0.29
NUP85-203ENST00000540768 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
NUP85-203ENST00000540768 RSF1Q96T23 1441 aaPredicted RBP16.64■□□□□ 0.25
NUP85-203ENST00000540768 CECR2Q9BXF3 1484 aa16.59■□□□□ 0.25
NUP85-203ENST00000540768 CC2D2AQ9P2K1 1620 aa16.56■□□□□ 0.24
NUP85-203ENST00000540768 EIF4G1Q04637 1599 aaKnown RBP16.53■□□□□ 0.24
NUP85-203ENST00000540768 MROH2BQ7Z745 1585 aa16.39■□□□□ 0.21
NUP85-203ENST00000540768 WIZO95785 1651 aa16.28■□□□□ 0.2
NUP85-203ENST00000540768 LOC105371045A0A1W2PR82 267 aa16.26■□□□□ 0.19
NUP85-203ENST00000540768 BAZ1AQ9NRL2 1556 aaPredicted RBP16.25■□□□□ 0.19
NUP85-203ENST00000540768 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
NUP85-203ENST00000540768 SMARCA4P51532 1647 aa16.13■□□□□ 0.17
NUP85-203ENST00000540768 TOP2AP11388 1531 aaKnown RBP16.08■□□□□ 0.16
NUP85-203ENST00000540768 PCGF6Q9BYE7 350 aa16.06■□□□□ 0.16
NUP85-203ENST00000540768 NCAPD3P42695 1498 aa16.04■□□□□ 0.16
NUP85-203ENST00000540768 HRCP23327 699 aa16.03■□□□□ 0.16
NUP85-203ENST00000540768 ATAD2BQ9ULI0 1458 aa15.99■□□□□ 0.15
NUP85-203ENST00000540768 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
NUP85-203ENST00000540768 SMARCA2P51531 1590 aa15.97■□□□□ 0.15
NUP85-203ENST00000540768 DNAJC5Q9H3Z4 198 aa15.96■□□□□ 0.14
NUP85-203ENST00000540768 FAM9AQ8IZU1 332 aaPredicted RBP15.95■□□□□ 0.14
NUP85-203ENST00000540768 ERCC6Q03468 1493 aa15.9■□□□□ 0.14
NUP85-203ENST00000540768 PEG3Q9GZU2 1588 aa15.89■□□□□ 0.13
NUP85-203ENST00000540768 TRIM26Q12899 539 aaPredicted RBP15.88■□□□□ 0.13
NUP85-203ENST00000540768 HMGXB3Q12766 1538 aa15.84■□□□□ 0.13
NUP85-203ENST00000540768 BAZ1BQ9UIG0 1483 aaKnown RBP15.82■□□□□ 0.12
NUP85-203ENST00000540768 ABCC8Q09428 1581 aa15.82■□□□□ 0.12
NUP85-203ENST00000540768 CUX2O14529 1486 aa15.82■□□□□ 0.12
NUP85-203ENST00000540768 NESP48681 1621 aa15.8■□□□□ 0.12
NUP85-203ENST00000540768 EHMT2Q96KQ7 1210 aa15.74■□□□□ 0.11
NUP85-203ENST00000540768 SOGA1O94964 1423 aa15.66■□□□□ 0.1
NUP85-203ENST00000540768 PPARGC1BQ86YN6 1023 aaKnown RBP15.64■□□□□ 0.09
NUP85-203ENST00000540768 EEA1Q15075 1411 aa15.63■□□□□ 0.09
NUP85-203ENST00000540768 WRNQ14191 1432 aaPredicted RBP eCLIP15.62■□□□□ 0.09
NUP85-203ENST00000540768 PDS5BQ9NTI5 1447 aa15.62■□□□□ 0.09
NUP85-203ENST00000540768 LAMC3Q9Y6N6 1575 aa15.61■□□□□ 0.09
NUP85-203ENST00000540768 CADPSQ9ULU8 1353 aa15.59■□□□□ 0.09
NUP85-203ENST00000540768 RUSC2Q8N2Y8 1516 aa15.58■□□□□ 0.09
NUP85-203ENST00000540768 SYNJ1O43426 1573 aa15.56■□□□□ 0.08
NUP85-203ENST00000540768 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
NUP85-203ENST00000540768 TNIKQ9UKE5 1360 aa15.55■□□□□ 0.08
NUP85-203ENST00000540768 THOC2Q8NI27 1593 aaKnown RBP15.53■□□□□ 0.08
NUP85-203ENST00000540768 CEP162Q5TB80 1403 aa15.51■□□□□ 0.07
NUP85-203ENST00000540768 ZEB1P37275 1124 aaPredicted RBP15.48■□□□□ 0.07
NUP85-203ENST00000540768 GOLGA3Q08378 1498 aa15.47■□□□□ 0.07
NUP85-203ENST00000540768 KIF21AQ7Z4S6 1674 aa15.46■□□□□ 0.07
NUP85-203ENST00000540768 MRC2Q9UBG0 1479 aa15.44■□□□□ 0.06
NUP85-203ENST00000540768 KIF21BO75037 1637 aa15.42■□□□□ 0.06
NUP85-203ENST00000540768 TOP2BQ02880 1626 aa15.42■□□□□ 0.06
NUP85-203ENST00000540768 CEP164Q9UPV0 1460 aa15.41■□□□□ 0.06
NUP85-203ENST00000540768 UBTFP17480 764 aaKnown RBP15.41■□□□□ 0.06
NUP85-203ENST00000540768 BIVM-ERCC5R4GMW8 1640 aa15.38■□□□□ 0.05
NUP85-203ENST00000540768 FANCD2Q9BXW9 1451 aa15.38■□□□□ 0.05
NUP85-203ENST00000540768 CFTRP13569 1480 aa15.37■□□□□ 0.05
NUP85-203ENST00000540768 WDR62O43379 1518 aa15.36■□□□□ 0.05
NUP85-203ENST00000540768 RAPGEF2Q9Y4G8 1499 aa15.29■□□□□ 0.04
NUP85-203ENST00000540768 CUX1P39880 1505 aa15.28■□□□□ 0.04
NUP85-203ENST00000540768 CLIP1P30622 1438 aa15.26■□□□□ 0.03
NUP85-203ENST00000540768 URB2Q14146 1524 aaKnown RBP15.23■□□□□ 0.03
NUP85-203ENST00000540768 OSCARQ8IYS5 282 aa15.23■□□□□ 0.03
NUP85-203ENST00000540768 PRXQ9BXM0 1461 aa15.22■□□□□ 0.03
NUP85-203ENST00000540768 ERICH3Q5RHP9 1530 aa15.22■□□□□ 0.03
NUP85-203ENST00000540768 PRDM2Q13029 1718 aa15.21■□□□□ 0.03
NUP85-203ENST00000540768 TTBK1Q5TCY1 1321 aaPredicted RBP15.21■□□□□ 0.02
NUP85-203ENST00000540768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.2■□□□□ 0.02
NUP85-203ENST00000540768 VPS8Q8N3P4 1428 aa15.2■□□□□ 0.02
NUP85-203ENST00000540768 CCER1Q8TC90 406 aaPredicted RBP15.15■□□□□ 0.02
NUP85-203ENST00000540768 KIF27Q86VH2 1401 aa15.15■□□□□ 0.02
NUP85-203ENST00000540768 ZNF608Q9ULD9 1512 aaPredicted RBP15.08■□□□□ 0.01
NUP85-203ENST00000540768 ARAP1Q96P48 1450 aa15.07■□□□□ 0
NUP85-203ENST00000540768 IFT140Q96RY7 1462 aa15.07■□□□□ 0
NUP85-203ENST00000540768 TOPBP1Q92547 1522 aa15.06■□□□□ 0
NUP85-203ENST00000540768 RANGAP1P46060 587 aaPredicted RBP15.04■□□□□ -0
NUP85-203ENST00000540768 APLP2Q06481 763 aa15.03■□□□□ -0
NUP85-203ENST00000540768 IGF1RP08069 1367 aa15.02□□□□□ -0.01
NUP85-203ENST00000540768 FGD5Q6ZNL6 1462 aa15.01□□□□□ -0.01
NUP85-203ENST00000540768 AQRO60306 1485 aaKnown RBP eCLIP14.97□□□□□ -0.014e-7■■■■□ 19.7
NUP85-203ENST00000540768 FBLN2P98095 1184 aa14.97□□□□□ -0.01
NUP85-203ENST00000540768 ARHGAP35Q9NRY4 1499 aa14.97□□□□□ -0.01
NUP85-203ENST00000540768 DNMBPQ6XZF7 1577 aa14.96□□□□□ -0.01
NUP85-203ENST00000540768 HNRNPUL2Q1KMD3 747 aaKnown RBP14.94□□□□□ -0.02
NUP85-203ENST00000540768 CARMIL1Q5VZK9 1371 aa14.92□□□□□ -0.02
NUP85-203ENST00000540768 POLA1P09884 1462 aaPredicted RBP14.91□□□□□ -0.02
NUP85-203ENST00000540768 KANK4Q5T7N3 995 aaPredicted RBP14.91□□□□□ -0.02
NUP85-203ENST00000540768 TDRD9Q8NDG6 1382 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms