RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 PRG4Q92954 1404 aaPredicted RBP29.38■■■□□ 2.29
CACNA2D4-211ENST00000540728 JPH4Q96JJ6 628 aa29.3■■■□□ 2.28
CACNA2D4-211ENST00000540728 CARMIL1Q5VZK9 1371 aa29.26■■■□□ 2.28
CACNA2D4-211ENST00000540728 KIAA0586Q9BVV6 1533 aa29.25■■■□□ 2.27
CACNA2D4-211ENST00000540728 IQGAP2Q13576 1575 aa29.1■■■□□ 2.25
CACNA2D4-211ENST00000540728 ADCY10Q96PN6 1610 aa29.05■■■□□ 2.24
CACNA2D4-211ENST00000540728 RAPGEF2Q9Y4G8 1499 aa29.05■■■□□ 2.24
CACNA2D4-211ENST00000540728 CARMIL2Q6F5E8 1435 aa29■■■□□ 2.23
CACNA2D4-211ENST00000540728 TTBK1Q5TCY1 1321 aaPredicted RBP28.97■■■□□ 2.23
CACNA2D4-211ENST00000540728 KIF13AQ9H1H9 1805 aa28.97■■■□□ 2.23
CACNA2D4-211ENST00000540728 NPM1P06748 294 aaKnown RBP eCLIP28.96■■■□□ 2.23
CACNA2D4-211ENST00000540728 MAPKBP1O60336 1514 aa28.94■■■□□ 2.22
CACNA2D4-211ENST00000540728 PTPRGP23470 1445 aa28.94■■■□□ 2.22
CACNA2D4-211ENST00000540728 TNIKQ9UKE5 1360 aa28.91■■■□□ 2.22
CACNA2D4-211ENST00000540728 CTTNBP2Q8WZ74 1663 aa28.9■■■□□ 2.22
CACNA2D4-211ENST00000540728 DISP1Q96F81 1524 aa28.87■■■□□ 2.21
CACNA2D4-211ENST00000540728 UGGT2Q9NYU1 1516 aa28.86■■■□□ 2.21
CACNA2D4-211ENST00000540728 ABCC10Q5T3U5 1492 aa28.85■■■□□ 2.21
CACNA2D4-211ENST00000540728 DIP2BQ9P265 1576 aa28.84■■■□□ 2.21
CACNA2D4-211ENST00000540728 KIAA0556O60303 1618 aa28.83■■■□□ 2.21
CACNA2D4-211ENST00000540728 PRXQ9BXM0 1461 aa28.82■■■□□ 2.2
CACNA2D4-211ENST00000540728 FAM69CQ0P6D2 419 aa28.8■■■□□ 2.2
CACNA2D4-211ENST00000540728 ABCC2Q92887 1545 aa28.79■■■□□ 2.2
CACNA2D4-211ENST00000540728 CSRNP3Q8WYN3 585 aa28.78■■■□□ 2.2
CACNA2D4-211ENST00000540728 EEA1Q15075 1411 aa28.75■■■□□ 2.19
CACNA2D4-211ENST00000540728 UACAQ9BZF9 1416 aa28.74■■■□□ 2.19
CACNA2D4-211ENST00000540728 UHRF1BP1LA0JNW5 1464 aa28.72■■■□□ 2.19
CACNA2D4-211ENST00000540728 GOLGA3Q08378 1498 aa28.69■■■□□ 2.18
CACNA2D4-211ENST00000540728 TSPOAP1O95153 1857 aa28.66■■■□□ 2.18
CACNA2D4-211ENST00000540728 ASXL2Q76L83 1435 aa28.65■■■□□ 2.18
CACNA2D4-211ENST00000540728 ZCCHC11Q5TAX3 1644 aaKnown RBP28.62■■■□□ 2.17
CACNA2D4-211ENST00000540728 PLB1Q6P1J6 1458 aa28.62■■■□□ 2.17
CACNA2D4-211ENST00000540728 CHIC1Q5VXU3 224 aa28.62■■■□□ 2.17
CACNA2D4-211ENST00000540728 FAM9AQ8IZU1 332 aaPredicted RBP28.62■■■□□ 2.17
CACNA2D4-211ENST00000540728 KDM5BQ9UGL1 1544 aa28.59■■■□□ 2.17
CACNA2D4-211ENST00000540728 KDM6BO15054 1643 aa28.55■■■□□ 2.16
CACNA2D4-211ENST00000540728 GLI2P10070 1586 aa28.52■■■□□ 2.16
CACNA2D4-211ENST00000540728 ABCA8O94911 1581 aa28.51■■■□□ 2.15
CACNA2D4-211ENST00000540728 EPRSP07814 1512 aaKnown RBP28.48■■■□□ 2.15
CACNA2D4-211ENST00000540728 PPRC1Q5VV67 1664 aaKnown RBP28.45■■■□□ 2.15
CACNA2D4-211ENST00000540728 SAMD9Q5K651 1589 aa28.45■■■□□ 2.14
CACNA2D4-211ENST00000540728 AEBP2Q6ZN18 517 aaPredicted RBP28.44■■■□□ 2.14
CACNA2D4-211ENST00000540728 WDR7Q9Y4E6 1490 aa28.44■■■□□ 2.14
CACNA2D4-211ENST00000540728 P3H3Q8IVL6 736 aa28.43■■■□□ 2.14
CACNA2D4-211ENST00000540728 KIF21BO75037 1637 aa28.43■■■□□ 2.14
CACNA2D4-211ENST00000540728 MAP3K4Q9Y6R4 1608 aa28.42■■■□□ 2.14
CACNA2D4-211ENST00000540728 RANGAP1P46060 587 aaPredicted RBP28.36■■■□□ 2.13
CACNA2D4-211ENST00000540728 TEX14Q8IWB6 1497 aa28.34■■■□□ 2.13
CACNA2D4-211ENST00000540728 ARID3CA6NKF2 412 aa28.32■■■□□ 2.12
CACNA2D4-211ENST00000540728 RAPGEF6Q8TEU7 1601 aa28.31■■■□□ 2.12
CACNA2D4-211ENST00000540728 UBTFP17480 764 aaKnown RBP28.29■■■□□ 2.12
CACNA2D4-211ENST00000540728 FHOD3Q2V2M9 1422 aa28.27■■■□□ 2.12
CACNA2D4-211ENST00000540728 EHMT2Q96KQ7 1210 aa28.27■■■□□ 2.12
CACNA2D4-211ENST00000540728 CFAP43Q8NDM7 1665 aa28.26■■■□□ 2.12
CACNA2D4-211ENST00000540728 KCNH8Q96L42 1107 aa28.25■■■□□ 2.11
CACNA2D4-211ENST00000540728 EFCAB5A4FU69 1503 aa28.23■■■□□ 2.11
CACNA2D4-211ENST00000540728 ATP10BO94823 1461 aa28.22■■■□□ 2.11
CACNA2D4-211ENST00000540728 CD109Q6YHK3 1445 aa28.2■■■□□ 2.11
CACNA2D4-211ENST00000540728 MAGI3Q5TCQ9 1506 aa28.16■■■□□ 2.1
CACNA2D4-211ENST00000540728 NUP153P49790 1475 aaKnown RBP28.15■■■□□ 2.1
CACNA2D4-211ENST00000540728 COL17A1Q9UMD9 1497 aaPredicted RBP28.15■■■□□ 2.1
CACNA2D4-211ENST00000540728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.14■■■□□ 2.1
CACNA2D4-211ENST00000540728 HNRNPUL2Q1KMD3 747 aaKnown RBP28.14■■■□□ 2.1
CACNA2D4-211ENST00000540728 ABCA9Q8IUA7 1624 aa28.09■■■□□ 2.09
CACNA2D4-211ENST00000540728 ARHGAP35Q9NRY4 1499 aa27.98■■■□□ 2.07
CACNA2D4-211ENST00000540728 KDM4FA0A1W2PPD8 638 aa27.98■■■□□ 2.07
CACNA2D4-211ENST00000540728 FMN1Q68DA7 1419 aa27.98■■■□□ 2.07
CACNA2D4-211ENST00000540728 ADGRL1O94910 1474 aa27.97■■■□□ 2.07
CACNA2D4-211ENST00000540728 PLEKHD1A6NEE1 506 aa27.97■■■□□ 2.07
CACNA2D4-211ENST00000540728 CDK13Q14004 1512 aaKnown RBP27.96■■■□□ 2.07
CACNA2D4-211ENST00000540728 HECW1Q76N89 1606 aa27.95■■■□□ 2.06
CACNA2D4-211ENST00000540728 ATP1B4Q9UN42 357 aaPredicted RBP27.92■■■□□ 2.06
CACNA2D4-211ENST00000540728 ARAP3Q8WWN8 1544 aa27.92■■■□□ 2.06
CACNA2D4-211ENST00000540728 NEO1Q92859 1461 aa27.89■■■□□ 2.05
CACNA2D4-211ENST00000540728 TTC37Q6PGP7 1564 aa27.87■■■□□ 2.05
CACNA2D4-211ENST00000540728 PHLDB1Q86UU1 1377 aa27.86■■■□□ 2.05
CACNA2D4-211ENST00000540728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.85■■■□□ 2.05
CACNA2D4-211ENST00000540728 CFAP74Q9C0B2 1584 aa27.83■■■□□ 2.05
CACNA2D4-211ENST00000540728 CDK11AQ9UQ88 783 aaPredicted RBP27.8■■■□□ 2.04
CACNA2D4-211ENST00000540728 FRMPD1Q5SYB0 1578 aa27.79■■■□□ 2.04
CACNA2D4-211ENST00000540728 FANCAO15360 1455 aa27.77■■■□□ 2.04
CACNA2D4-211ENST00000540728 PCF11O94913 1555 aaKnown RBP27.77■■■□□ 2.04
CACNA2D4-211ENST00000540728 CLIP1P30622 1438 aa27.75■■■□□ 2.03
CACNA2D4-211ENST00000540728 RAPGEF3O95398 923 aa27.75■■■□□ 2.03
CACNA2D4-211ENST00000540728 LRRIQ1Q96JM4 1722 aa27.74■■■□□ 2.03
CACNA2D4-211ENST00000540728 KIF14Q15058 1648 aa27.73■■■□□ 2.03
CACNA2D4-211ENST00000540728 AKNAQ7Z591 1439 aa27.71■■■□□ 2.03
CACNA2D4-211ENST00000540728 DENND4BO75064 1496 aaPredicted RBP27.7■■■□□ 2.03
CACNA2D4-211ENST00000540728 RICTORQ6R327 1708 aa27.7■■■□□ 2.02
CACNA2D4-211ENST00000540728 MYO5CQ9NQX4 1742 aa27.7■■■□□ 2.02
CACNA2D4-211ENST00000540728 CASKIN1Q8WXD9 1431 aa27.69■■■□□ 2.02
CACNA2D4-211ENST00000540728 ARHGEF40Q8TER5 1519 aa27.67■■■□□ 2.02
CACNA2D4-211ENST00000540728 TROQ12816 1431 aaPredicted RBP27.66■■■□□ 2.02
CACNA2D4-211ENST00000540728 CCDC18Q5T9S5 1454 aa27.64■■■□□ 2.02
CACNA2D4-211ENST00000540728 PLCH2O75038 1416 aa27.62■■■□□ 2.01
CACNA2D4-211ENST00000540728 FYCO1Q9BQS8 1478 aa27.61■■■□□ 2.01
CACNA2D4-211ENST00000540728 ZMYM4Q5VZL5 1548 aa27.59■■■□□ 2.01
CACNA2D4-211ENST00000540728 ARHGAP5Q13017 1502 aa27.57■■■□□ 2
CACNA2D4-211ENST00000540728 ZFYVE16Q7Z3T8 1539 aa27.57■■■□□ 2
CACNA2D4-211ENST00000540728 ARID4BQ4LE39 1312 aaPredicted RBP27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms