RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 IGF1RP08069 1367 aa17.77■□□□□ 0.43
CDCA3-208ENST00000540683 JPH4Q96JJ6 628 aa17.75■□□□□ 0.43
CDCA3-208ENST00000540683 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
CDCA3-208ENST00000540683 PRG4Q92954 1404 aaPredicted RBP17.72■□□□□ 0.43
CDCA3-208ENST00000540683 KIAA0586Q9BVV6 1533 aa17.71■□□□□ 0.43
CDCA3-208ENST00000540683 CARMIL1Q5VZK9 1371 aa17.7■□□□□ 0.42
CDCA3-208ENST00000540683 ERCC6L2Q5T890 1561 aa17.64■□□□□ 0.41
CDCA3-208ENST00000540683 NPM1P06748 294 aaKnown RBP eCLIP17.63■□□□□ 0.41
CDCA3-208ENST00000540683 CARMIL2Q6F5E8 1435 aa17.63■□□□□ 0.41
CDCA3-208ENST00000540683 RAPGEF2Q9Y4G8 1499 aa17.59■□□□□ 0.41
CDCA3-208ENST00000540683 IQGAP2Q13576 1575 aa17.57■□□□□ 0.4
CDCA3-208ENST00000540683 PTPRGP23470 1445 aa17.51■□□□□ 0.39
CDCA3-208ENST00000540683 TNIKQ9UKE5 1360 aa17.51■□□□□ 0.39
CDCA3-208ENST00000540683 FAM9AQ8IZU1 332 aaPredicted RBP17.5■□□□□ 0.39
CDCA3-208ENST00000540683 MAPKBP1O60336 1514 aa17.47■□□□□ 0.39
CDCA3-208ENST00000540683 UGGT2Q9NYU1 1516 aa17.45■□□□□ 0.38
CDCA3-208ENST00000540683 EEA1Q15075 1411 aa17.45■□□□□ 0.38
CDCA3-208ENST00000540683 GOLGA3Q08378 1498 aa17.44■□□□□ 0.38
CDCA3-208ENST00000540683 ADCY10Q96PN6 1610 aa17.43■□□□□ 0.38
CDCA3-208ENST00000540683 CTTNBP2Q8WZ74 1663 aa17.42■□□□□ 0.38
CDCA3-208ENST00000540683 ABCC10Q5T3U5 1492 aa17.41■□□□□ 0.38
CDCA3-208ENST00000540683 PRXQ9BXM0 1461 aa17.4■□□□□ 0.38
CDCA3-208ENST00000540683 UHRF1BP1LA0JNW5 1464 aa17.39■□□□□ 0.37
CDCA3-208ENST00000540683 ABCC2Q92887 1545 aa17.39■□□□□ 0.37
CDCA3-208ENST00000540683 FAM69CQ0P6D2 419 aa17.38■□□□□ 0.37
CDCA3-208ENST00000540683 UACAQ9BZF9 1416 aa17.38■□□□□ 0.37
CDCA3-208ENST00000540683 KIF13AQ9H1H9 1805 aa17.37■□□□□ 0.37
CDCA3-208ENST00000540683 DISP1Q96F81 1524 aa17.37■□□□□ 0.37
CDCA3-208ENST00000540683 CSRNP3Q8WYN3 585 aa17.36■□□□□ 0.37
CDCA3-208ENST00000540683 KIAA0556O60303 1618 aa17.36■□□□□ 0.37
CDCA3-208ENST00000540683 TTBK1Q5TCY1 1321 aaPredicted RBP17.35■□□□□ 0.37
CDCA3-208ENST00000540683 PLB1Q6P1J6 1458 aa17.35■□□□□ 0.37
CDCA3-208ENST00000540683 DIP2BQ9P265 1576 aa17.32■□□□□ 0.36
CDCA3-208ENST00000540683 KDM5BQ9UGL1 1544 aa17.27■□□□□ 0.36
CDCA3-208ENST00000540683 ASXL2Q76L83 1435 aa17.27■□□□□ 0.35
CDCA3-208ENST00000540683 GLI2P10070 1586 aa17.25■□□□□ 0.35
CDCA3-208ENST00000540683 ZCCHC11Q5TAX3 1644 aaKnown RBP17.21■□□□□ 0.35
CDCA3-208ENST00000540683 TEX14Q8IWB6 1497 aa17.19■□□□□ 0.34
CDCA3-208ENST00000540683 KDM6BO15054 1643 aa17.18■□□□□ 0.34
CDCA3-208ENST00000540683 ABCA8O94911 1581 aa17.18■□□□□ 0.34
CDCA3-208ENST00000540683 KIF21BO75037 1637 aa17.18■□□□□ 0.34
CDCA3-208ENST00000540683 TSPOAP1O95153 1857 aa17.17■□□□□ 0.34
CDCA3-208ENST00000540683 WDR7Q9Y4E6 1490 aa17.17■□□□□ 0.34
CDCA3-208ENST00000540683 EPRSP07814 1512 aaKnown RBP17.16■□□□□ 0.34
CDCA3-208ENST00000540683 SAMD9Q5K651 1589 aa17.15■□□□□ 0.34
CDCA3-208ENST00000540683 EFCAB5A4FU69 1503 aa17.13■□□□□ 0.33
CDCA3-208ENST00000540683 MAP3K4Q9Y6R4 1608 aa17.11■□□□□ 0.33
CDCA3-208ENST00000540683 CFAP43Q8NDM7 1665 aa17.08■□□□□ 0.32
CDCA3-208ENST00000540683 P3H3Q8IVL6 736 aa17.08■□□□□ 0.32
CDCA3-208ENST00000540683 RAPGEF6Q8TEU7 1601 aa17.07■□□□□ 0.32
CDCA3-208ENST00000540683 UBTFP17480 764 aaKnown RBP17.06■□□□□ 0.32
CDCA3-208ENST00000540683 CD109Q6YHK3 1445 aa17.05■□□□□ 0.32
CDCA3-208ENST00000540683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.04■□□□□ 0.32
CDCA3-208ENST00000540683 HNRNPUL2Q1KMD3 747 aaKnown RBP17.04■□□□□ 0.32
CDCA3-208ENST00000540683 MAGI3Q5TCQ9 1506 aa17.04■□□□□ 0.32
CDCA3-208ENST00000540683 PPRC1Q5VV67 1664 aaKnown RBP17.04■□□□□ 0.32
CDCA3-208ENST00000540683 PLPPR3Q6T4P5 718 aa17.03■□□□□ 0.32
CDCA3-208ENST00000540683 KCNH8Q96L42 1107 aa17.03■□□□□ 0.32
CDCA3-208ENST00000540683 PHLDB1Q86UU1 1377 aa17.02■□□□□ 0.32
CDCA3-208ENST00000540683 ATP10BO94823 1461 aa17.02■□□□□ 0.32
CDCA3-208ENST00000540683 RANGAP1P46060 587 aaPredicted RBP17■□□□□ 0.31
CDCA3-208ENST00000540683 FMN1Q68DA7 1419 aa16.99■□□□□ 0.31
CDCA3-208ENST00000540683 FHOD3Q2V2M9 1422 aa16.98■□□□□ 0.31
CDCA3-208ENST00000540683 PLEKHD1A6NEE1 506 aa16.98■□□□□ 0.31
CDCA3-208ENST00000540683 SENP3Q9H4L4 574 aaPredicted RBP16.96■□□□□ 0.31
CDCA3-208ENST00000540683 ABCA9Q8IUA7 1624 aa16.96■□□□□ 0.3
CDCA3-208ENST00000540683 NUP153P49790 1475 aaKnown RBP16.95■□□□□ 0.3
CDCA3-208ENST00000540683 CDK11AQ9UQ88 783 aaPredicted RBP16.94■□□□□ 0.3
CDCA3-208ENST00000540683 ARID3CA6NKF2 412 aa16.93■□□□□ 0.3
CDCA3-208ENST00000540683 NEO1Q92859 1461 aa16.91■□□□□ 0.3
CDCA3-208ENST00000540683 ARAP3Q8WWN8 1544 aa16.91■□□□□ 0.3
CDCA3-208ENST00000540683 HECW1Q76N89 1606 aa16.89■□□□□ 0.29
CDCA3-208ENST00000540683 CFAP74Q9C0B2 1584 aa16.88■□□□□ 0.29
CDCA3-208ENST00000540683 COL17A1Q9UMD9 1497 aaPredicted RBP16.86■□□□□ 0.29
CDCA3-208ENST00000540683 ARHGAP35Q9NRY4 1499 aa16.85■□□□□ 0.29
CDCA3-208ENST00000540683 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
CDCA3-208ENST00000540683 ATP1B4Q9UN42 357 aaPredicted RBP16.84■□□□□ 0.29
CDCA3-208ENST00000540683 CLIP1P30622 1438 aa16.81■□□□□ 0.28
CDCA3-208ENST00000540683 CCDC18Q5T9S5 1454 aa16.8■□□□□ 0.28
CDCA3-208ENST00000540683 KDM4FA0A1W2PPD8 638 aa16.79■□□□□ 0.28
CDCA3-208ENST00000540683 ADGRL1O94910 1474 aa16.79■□□□□ 0.28
CDCA3-208ENST00000540683 FANCAO15360 1455 aa16.78■□□□□ 0.28
CDCA3-208ENST00000540683 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.77■□□□□ 0.28
CDCA3-208ENST00000540683 CDK13Q14004 1512 aaKnown RBP16.76■□□□□ 0.27
CDCA3-208ENST00000540683 DENND4BO75064 1496 aaPredicted RBP16.76■□□□□ 0.27
CDCA3-208ENST00000540683 CASKIN1Q8WXD9 1431 aa16.76■□□□□ 0.27
CDCA3-208ENST00000540683 KIF14Q15058 1648 aa16.75■□□□□ 0.27
CDCA3-208ENST00000540683 AKNAQ7Z591 1439 aa16.74■□□□□ 0.27
CDCA3-208ENST00000540683 PLCH2O75038 1416 aa16.73■□□□□ 0.27
CDCA3-208ENST00000540683 TROQ12816 1431 aaPredicted RBP16.73■□□□□ 0.27
CDCA3-208ENST00000540683 EFCAB2Q5VUJ9 269 aa16.73■□□□□ 0.27
CDCA3-208ENST00000540683 FYCO1Q9BQS8 1478 aa16.73■□□□□ 0.27
CDCA3-208ENST00000540683 MYO5CQ9NQX4 1742 aa16.72■□□□□ 0.27
CDCA3-208ENST00000540683 TTC37Q6PGP7 1564 aa16.71■□□□□ 0.27
CDCA3-208ENST00000540683 MAGI2Q86UL8 1455 aa16.7■□□□□ 0.26
CDCA3-208ENST00000540683 RAPGEF3O95398 923 aa16.7■□□□□ 0.26
CDCA3-208ENST00000540683 POGZQ7Z3K3 1410 aa16.67■□□□□ 0.26
CDCA3-208ENST00000540683 ZMYM4Q5VZL5 1548 aa16.66■□□□□ 0.26
CDCA3-208ENST00000540683 PCF11O94913 1555 aaKnown RBP16.66■□□□□ 0.26
CDCA3-208ENST00000540683 RICTORQ6R327 1708 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms