RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 ANP32EQ9BTT0 268 aa16.05■□□□□ 0.16
CPT1A-206ENST00000540367 SETD5Q9C0A6 1442 aa16.02■□□□□ 0.16
CPT1A-206ENST00000540367 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
CPT1A-206ENST00000540367 FGD5Q6ZNL6 1462 aa16■□□□□ 0.15
CPT1A-206ENST00000540367 FANCD2Q9BXW9 1451 aa16■□□□□ 0.15
CPT1A-206ENST00000540367 P3H3Q8IVL6 736 aa16■□□□□ 0.15
CPT1A-206ENST00000540367 RAD54L2Q9Y4B4 1467 aa15.98■□□□□ 0.15
CPT1A-206ENST00000540367 LRRC9Q6ZRR7 1453 aa15.98■□□□□ 0.15
CPT1A-206ENST00000540367 IGF1RP08069 1367 aa15.96■□□□□ 0.15
CPT1A-206ENST00000540367 ATP1B4Q9UN42 357 aaPredicted RBP15.96■□□□□ 0.15
CPT1A-206ENST00000540367 CFAP43Q8NDM7 1665 aa15.96■□□□□ 0.14
CPT1A-206ENST00000540367 PRDM2Q13029 1718 aa15.95■□□□□ 0.14
CPT1A-206ENST00000540367 DDX10Q13206 875 aaKnown RBP15.94■□□□□ 0.14
CPT1A-206ENST00000540367 FKBP8Q14318 412 aa15.94■□□□□ 0.14
CPT1A-206ENST00000540367 PHLDB1Q86UU1 1377 aa15.94■□□□□ 0.14
CPT1A-206ENST00000540367 TIMELESSQ9UNS1 1208 aa15.93■□□□□ 0.14
CPT1A-206ENST00000540367 BCANQ96GW7 911 aa15.93■□□□□ 0.14
CPT1A-206ENST00000540367 PPP1R15AO75807 674 aaPredicted RBP15.92■□□□□ 0.14
CPT1A-206ENST00000540367 SIN3AQ96ST3 1273 aa15.9■□□□□ 0.14
CPT1A-206ENST00000540367 FHAD1B1AJZ9 1412 aa15.89■□□□□ 0.13
CPT1A-206ENST00000540367 CCER2I3L3R5 266 aa15.89■□□□□ 0.13
CPT1A-206ENST00000540367 PCF11O94913 1555 aaKnown RBP15.88■□□□□ 0.13
CPT1A-206ENST00000540367 NEFLP07196 543 aa15.87■□□□□ 0.13
CPT1A-206ENST00000540367 CARMIL1Q5VZK9 1371 aa15.86■□□□□ 0.13
CPT1A-206ENST00000540367 POLA1P09884 1462 aaPredicted RBP15.86■□□□□ 0.13
CPT1A-206ENST00000540367 TOPBP1Q92547 1522 aa15.85■□□□□ 0.13
CPT1A-206ENST00000540367 FAM50AQ14320 339 aaKnown RBP15.85■□□□□ 0.13
CPT1A-206ENST00000540367 URB2Q14146 1524 aaKnown RBP15.83■□□□□ 0.12
CPT1A-206ENST00000540367 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.83■□□□□ 0.12
CPT1A-206ENST00000540367 HIRIP3Q9BW71 556 aaPredicted RBP15.83■□□□□ 0.12
CPT1A-206ENST00000540367 TDRD9Q8NDG6 1382 aaKnown RBP15.82■□□□□ 0.12
CPT1A-206ENST00000540367 ANP32CO43423 234 aa15.82■□□□□ 0.12
CPT1A-206ENST00000540367 RBM19Q9Y4C8 960 aaKnown RBP15.8■□□□□ 0.12
CPT1A-206ENST00000540367 FYCO1Q9BQS8 1478 aa15.79■□□□□ 0.12
CPT1A-206ENST00000540367 DNMBPQ6XZF7 1577 aa15.78■□□□□ 0.12
CPT1A-206ENST00000540367 TRIM52Q96A61 297 aa15.78■□□□□ 0.12
CPT1A-206ENST00000540367 EFCAB5A4FU69 1503 aa15.76■□□□□ 0.11
CPT1A-206ENST00000540367 BCL11AQ9H165 835 aa15.76■□□□□ 0.11
CPT1A-206ENST00000540367 AQRO60306 1485 aaKnown RBP eCLIP15.75■□□□□ 0.11
CPT1A-206ENST00000540367 CASKIN1Q8WXD9 1431 aa15.75■□□□□ 0.11
CPT1A-206ENST00000540367 FHOD3Q2V2M9 1422 aa15.74■□□□□ 0.11
CPT1A-206ENST00000540367 TONSLQ96HA7 1378 aa15.74■□□□□ 0.11
CPT1A-206ENST00000540367 LAMC3Q9Y6N6 1575 aa15.73■□□□□ 0.11
CPT1A-206ENST00000540367 KIF21AQ7Z4S6 1674 aa15.73■□□□□ 0.11
CPT1A-206ENST00000540367 CCDC18Q5T9S5 1454 aa15.72■□□□□ 0.11
CPT1A-206ENST00000540367 ABCA10Q8WWZ4 1543 aa15.72■□□□□ 0.11
CPT1A-206ENST00000540367 FGD6Q6ZV73 1430 aa15.71■□□□□ 0.11
CPT1A-206ENST00000540367 UACAQ9BZF9 1416 aa15.7■□□□□ 0.1
CPT1A-206ENST00000540367 PTPN23Q9H3S7 1636 aa15.69■□□□□ 0.1
CPT1A-206ENST00000540367 HFM1A2PYH4 1435 aa15.69■□□□□ 0.1
CPT1A-206ENST00000540367 CTTNBP2Q8WZ74 1663 aa15.68■□□□□ 0.1
CPT1A-206ENST00000540367 PDS5BQ9NTI5 1447 aa15.67■□□□□ 0.1
CPT1A-206ENST00000540367 SLC24A1O60721 1099 aa15.67■□□□□ 0.1
CPT1A-206ENST00000540367 KDM5BQ9UGL1 1544 aa15.65■□□□□ 0.1
CPT1A-206ENST00000540367 CUL7Q14999 1698 aa15.65■□□□□ 0.1
CPT1A-206ENST00000540367 FMN1Q68DA7 1419 aa15.64■□□□□ 0.09
CPT1A-206ENST00000540367 SNAPC4Q5SXM2 1469 aa15.64■□□□□ 0.09
CPT1A-206ENST00000540367 PTPRKQ15262 1439 aa15.63■□□□□ 0.09
CPT1A-206ENST00000540367 FANCIQ9NVI1 1328 aa15.61■□□□□ 0.09
CPT1A-206ENST00000540367 MSH5O43196 834 aa15.61■□□□□ 0.09
CPT1A-206ENST00000540367 NAIPQ13075 1403 aa15.61■□□□□ 0.09
CPT1A-206ENST00000540367 GAPVD1Q14C86 1478 aa15.61■□□□□ 0.09
CPT1A-206ENST00000540367 HNRNPUQ00839 825 aaKnown RBP eCLIP15.6■□□□□ 0.09
CPT1A-206ENST00000540367 ARID3CA6NKF2 412 aa15.6■□□□□ 0.09
CPT1A-206ENST00000540367 MTUS2Q5JR59 1369 aa15.59■□□□□ 0.09
CPT1A-206ENST00000540367 ERCC6Q03468 1493 aa15.59■□□□□ 0.09
CPT1A-206ENST00000540367 LRRIQ1Q96JM4 1722 aa15.58■□□□□ 0.09
CPT1A-206ENST00000540367 MYOM3Q5VTT5 1437 aa15.57■□□□□ 0.08
CPT1A-206ENST00000540367 CDK11AQ9UQ88 783 aaPredicted RBP15.57■□□□□ 0.08
CPT1A-206ENST00000540367 NCOA2Q15596 1464 aa15.56■□□□□ 0.08
CPT1A-206ENST00000540367 ERICH6BQ5W0A0 696 aa15.56■□□□□ 0.08
CPT1A-206ENST00000540367 SAMD9Q5K651 1589 aa15.56■□□□□ 0.08
CPT1A-206ENST00000540367 THOC2Q8NI27 1593 aaKnown RBP15.56■□□□□ 0.08
CPT1A-206ENST00000540367 SUPT6HQ7KZ85 1726 aaKnown RBP15.56■□□□□ 0.08
CPT1A-206ENST00000540367 ABCA5Q8WWZ7 1642 aa15.55■□□□□ 0.08
CPT1A-206ENST00000540367 HECW1Q76N89 1606 aa15.55■□□□□ 0.08
CPT1A-206ENST00000540367 EHBP1L1Q8N3D4 1523 aa15.54■□□□□ 0.08
CPT1A-206ENST00000540367 ZNF608Q9ULD9 1512 aaPredicted RBP15.54■□□□□ 0.08
CPT1A-206ENST00000540367 WASHC2AQ641Q2 1341 aa15.54■□□□□ 0.08
CPT1A-206ENST00000540367 GCC2Q8IWJ2 1684 aa15.53■□□□□ 0.08
CPT1A-206ENST00000540367 TARBP1Q13395 1621 aaKnown RBP15.53■□□□□ 0.08
CPT1A-206ENST00000540367 GRIN2BQ13224 1484 aa15.53■□□□□ 0.08
CPT1A-206ENST00000540367 IRX6P78412 446 aaPredicted RBP15.52■□□□□ 0.08
CPT1A-206ENST00000540367 CNTLNQ9NXG0 1405 aa15.51■□□□□ 0.07
CPT1A-206ENST00000540367 HSPA5P11021 654 aaKnown RBP15.51■□□□□ 0.07
CPT1A-206ENST00000540367 CHIC2Q9UKJ5 165 aa15.51■□□□□ 0.07
CPT1A-206ENST00000540367 UGGT2Q9NYU1 1516 aa15.5■□□□□ 0.07
CPT1A-206ENST00000540367 ARHGEF11O15085 1522 aa15.5■□□□□ 0.07
CPT1A-206ENST00000540367 PPP4R2Q9NY27 417 aa15.49■□□□□ 0.07
CPT1A-206ENST00000540367 DENND4BO75064 1496 aaPredicted RBP15.49■□□□□ 0.07
CPT1A-206ENST00000540367 PRKCSHP14314 528 aaPredicted RBP15.48■□□□□ 0.07
CPT1A-206ENST00000540367 ERICH6Q7L0X2 663 aa15.48■□□□□ 0.07
CPT1A-206ENST00000540367 TCOF1Q13428 1488 aaKnown RBP15.47■□□□□ 0.07
CPT1A-206ENST00000540367 AKNAQ7Z591 1439 aa15.47■□□□□ 0.07
CPT1A-206ENST00000540367 MRC2Q9UBG0 1479 aa15.47■□□□□ 0.07
CPT1A-206ENST00000540367 EIF4G2P78344 907 aaKnown RBP eCLIP15.46■□□□□ 0.07
CPT1A-206ENST00000540367 RRP7BPQ9NSQ0 103 aa15.46■□□□□ 0.07
CPT1A-206ENST00000540367 NCOA1Q15788 1441 aa15.44■□□□□ 0.06
CPT1A-206ENST00000540367 MAGI3Q5TCQ9 1506 aa15.43■□□□□ 0.06
CPT1A-206ENST00000540367 KDM6BO15054 1643 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms