RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 RAPGEF2Q9Y4G8 1499 aa22.44■■□□□ 1.18
PRPF19-204ENST00000539960 KIAA0586Q9BVV6 1533 aa22.41■■□□□ 1.18
PRPF19-204ENST00000539960 EEA1Q15075 1411 aa22.4■■□□□ 1.18
PRPF19-204ENST00000539960 FAM9AQ8IZU1 332 aaPredicted RBP22.39■■□□□ 1.17
PRPF19-204ENST00000539960 PRXQ9BXM0 1461 aa22.38■■□□□ 1.17
PRPF19-204ENST00000539960 ARAP1Q96P48 1450 aa22.34■■□□□ 1.17
PRPF19-204ENST00000539960 PRG4Q92954 1404 aaPredicted RBP22.33■■□□□ 1.17
PRPF19-204ENST00000539960 SHROOM2Q13796 1616 aa22.33■■□□□ 1.17
PRPF19-204ENST00000539960 ERCC6L2Q5T890 1561 aa22.29■■□□□ 1.16
PRPF19-204ENST00000539960 IQGAP2Q13576 1575 aa22.21■■□□□ 1.15
PRPF19-204ENST00000539960 CARMIL2Q6F5E8 1435 aa22.17■■□□□ 1.14
PRPF19-204ENST00000539960 UGGT2Q9NYU1 1516 aa22.13■■□□□ 1.13
PRPF19-204ENST00000539960 PTPRGP23470 1445 aa22.11■■□□□ 1.13
PRPF19-204ENST00000539960 DISP1Q96F81 1524 aa22.1■■□□□ 1.13
PRPF19-204ENST00000539960 TNIKQ9UKE5 1360 aa22.1■■□□□ 1.13
PRPF19-204ENST00000539960 KIF21BO75037 1637 aa22.09■■□□□ 1.13
PRPF19-204ENST00000539960 EHMT2Q96KQ7 1210 aa22.09■■□□□ 1.13
PRPF19-204ENST00000539960 TTBK1Q5TCY1 1321 aaPredicted RBP22.08■■□□□ 1.13
PRPF19-204ENST00000539960 CTTNBP2Q8WZ74 1663 aa22.08■■□□□ 1.13
PRPF19-204ENST00000539960 UBTFP17480 764 aaKnown RBP22.07■■□□□ 1.12
PRPF19-204ENST00000539960 GOLGA3Q08378 1498 aa22.03■■□□□ 1.12
PRPF19-204ENST00000539960 NPM1P06748 294 aaKnown RBP eCLIP21.99■■□□□ 1.11
PRPF19-204ENST00000539960 RANGAP1P46060 587 aaPredicted RBP21.99■■□□□ 1.11
PRPF19-204ENST00000539960 P3H3Q8IVL6 736 aa21.99■■□□□ 1.11
PRPF19-204ENST00000539960 KIAA0556O60303 1618 aa21.98■■□□□ 1.11
PRPF19-204ENST00000539960 TRHP20396 242 aaPredicted RBP21.94■■□□□ 1.1
PRPF19-204ENST00000539960 UACAQ9BZF9 1416 aa21.93■■□□□ 1.1
PRPF19-204ENST00000539960 ADCY10Q96PN6 1610 aa21.9■■□□□ 1.1
PRPF19-204ENST00000539960 UHRF1BP1LA0JNW5 1464 aa21.89■■□□□ 1.09
PRPF19-204ENST00000539960 SAMD9Q5K651 1589 aa21.86■■□□□ 1.09
PRPF19-204ENST00000539960 ABCC2Q92887 1545 aa21.84■■□□□ 1.09
PRPF19-204ENST00000539960 PLB1Q6P1J6 1458 aa21.83■■□□□ 1.09
PRPF19-204ENST00000539960 FHOD3Q2V2M9 1422 aa21.8■■□□□ 1.08
PRPF19-204ENST00000539960 EFCAB5A4FU69 1503 aa21.8■■□□□ 1.08
PRPF19-204ENST00000539960 KDM5BQ9UGL1 1544 aa21.78■■□□□ 1.08
PRPF19-204ENST00000539960 ABCA8O94911 1581 aa21.78■■□□□ 1.08
PRPF19-204ENST00000539960 MAPKBP1O60336 1514 aa21.77■■□□□ 1.08
PRPF19-204ENST00000539960 LOC105371045A0A1W2PR82 267 aa21.76■■□□□ 1.07
PRPF19-204ENST00000539960 ARHGAP35Q9NRY4 1499 aa21.75■■□□□ 1.07
PRPF19-204ENST00000539960 FAM69CQ0P6D2 419 aa21.73■■□□□ 1.07
PRPF19-204ENST00000539960 ASXL2Q76L83 1435 aa21.72■■□□□ 1.07
PRPF19-204ENST00000539960 ARID3CA6NKF2 412 aa21.7■■□□□ 1.06
PRPF19-204ENST00000539960 ABCC10Q5T3U5 1492 aa21.7■■□□□ 1.06
PRPF19-204ENST00000539960 ATP10BO94823 1461 aa21.67■■□□□ 1.06
PRPF19-204ENST00000539960 CLIP1P30622 1438 aa21.66■■□□□ 1.06
PRPF19-204ENST00000539960 FMN1Q68DA7 1419 aa21.66■■□□□ 1.06
PRPF19-204ENST00000539960 ZCCHC11Q5TAX3 1644 aaKnown RBP21.66■■□□□ 1.06
PRPF19-204ENST00000539960 RAPGEF6Q8TEU7 1601 aa21.65■■□□□ 1.06
PRPF19-204ENST00000539960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.63■■□□□ 1.05
PRPF19-204ENST00000539960 HNRNPUL2Q1KMD3 747 aaKnown RBP21.63■■□□□ 1.05
PRPF19-204ENST00000539960 NUP153P49790 1475 aaKnown RBP21.62■■□□□ 1.05
PRPF19-204ENST00000539960 ATP1B4Q9UN42 357 aaPredicted RBP21.61■■□□□ 1.05
PRPF19-204ENST00000539960 KCNH8Q96L42 1107 aa21.6■■□□□ 1.05
PRPF19-204ENST00000539960 DIP2BQ9P265 1576 aa21.59■■□□□ 1.05
PRPF19-204ENST00000539960 WDR7Q9Y4E6 1490 aa21.58■■□□□ 1.05
PRPF19-204ENST00000539960 KIF13AQ9H1H9 1805 aa21.57■■□□□ 1.04
PRPF19-204ENST00000539960 EPRSP07814 1512 aaKnown RBP21.56■■□□□ 1.04
PRPF19-204ENST00000539960 CEP162Q5TB80 1403 aa21.55■■□□□ 1.04
PRPF19-204ENST00000539960 PLEKHD1A6NEE1 506 aa21.55■■□□□ 1.04
PRPF19-204ENST00000539960 GLI2P10070 1586 aa21.53■■□□□ 1.04
PRPF19-204ENST00000539960 CASKIN1Q8WXD9 1431 aa21.5■■□□□ 1.03
PRPF19-204ENST00000539960 CDK11AQ9UQ88 783 aaPredicted RBP21.47■■□□□ 1.03
PRPF19-204ENST00000539960 CDK13Q14004 1512 aaKnown RBP21.45■■□□□ 1.02
PRPF19-204ENST00000539960 HECW1Q76N89 1606 aa21.45■■□□□ 1.02
PRPF19-204ENST00000539960 CD109Q6YHK3 1445 aa21.43■■□□□ 1.02
PRPF19-204ENST00000539960 FYCO1Q9BQS8 1478 aa21.4■■□□□ 1.02
PRPF19-204ENST00000539960 MAP3K4Q9Y6R4 1608 aa21.4■■□□□ 1.02
PRPF19-204ENST00000539960 PCF11O94913 1555 aaKnown RBP21.39■■□□□ 1.01
PRPF19-204ENST00000539960 TSPOAP1O95153 1857 aa21.39■■□□□ 1.01
PRPF19-204ENST00000539960 CCDC18Q5T9S5 1454 aa21.37■■□□□ 1.01
PRPF19-204ENST00000539960 MAGI3Q5TCQ9 1506 aa21.35■■□□□ 1.01
PRPF19-204ENST00000539960 TEX14Q8IWB6 1497 aa21.35■■□□□ 1.01
PRPF19-204ENST00000539960 TROQ12816 1431 aaPredicted RBP21.33■■□□□ 1.01
PRPF19-204ENST00000539960 PPRC1Q5VV67 1664 aaKnown RBP21.33■■□□□ 1
PRPF19-204ENST00000539960 CFAP43Q8NDM7 1665 aa21.33■■□□□ 1
PRPF19-204ENST00000539960 ABCA9Q8IUA7 1624 aa21.33■■□□□ 1
PRPF19-204ENST00000539960 LRRIQ1Q96JM4 1722 aa21.31■■□□□ 1
PRPF19-204ENST00000539960 VPS8Q8N3P4 1428 aa21.29■■□□□ 1
PRPF19-204ENST00000539960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.28■■□□□ 1
PRPF19-204ENST00000539960 COL17A1Q9UMD9 1497 aaPredicted RBP21.26■□□□□ 0.99
PRPF19-204ENST00000539960 PHLDB1Q86UU1 1377 aa21.25■□□□□ 0.99
PRPF19-204ENST00000539960 KDM6BO15054 1643 aa21.24■□□□□ 0.99
PRPF19-204ENST00000539960 PLCH2O75038 1416 aa21.22■□□□□ 0.99
PRPF19-204ENST00000539960 MTUS2Q5JR59 1369 aa21.21■□□□□ 0.99
PRPF19-204ENST00000539960 NEO1Q92859 1461 aa21.2■□□□□ 0.98
PRPF19-204ENST00000539960 TTC37Q6PGP7 1564 aa21.2■□□□□ 0.98
PRPF19-204ENST00000539960 KIF14Q15058 1648 aa21.19■□□□□ 0.98
PRPF19-204ENST00000539960 EFCAB2Q5VUJ9 269 aa21.19■□□□□ 0.98
PRPF19-204ENST00000539960 ARAP3Q8WWN8 1544 aa21.18■□□□□ 0.98
PRPF19-204ENST00000539960 FANCAO15360 1455 aa21.17■□□□□ 0.98
PRPF19-204ENST00000539960 AKNAQ7Z591 1439 aa21.16■□□□□ 0.98
PRPF19-204ENST00000539960 RAPGEF3O95398 923 aa21.14■□□□□ 0.97
PRPF19-204ENST00000539960 APLP2Q06481 763 aa21.14■□□□□ 0.97
PRPF19-204ENST00000539960 MAP3K1Q13233 1512 aa21.11■□□□□ 0.97
PRPF19-204ENST00000539960 KANK4Q5T7N3 995 aaPredicted RBP21.11■□□□□ 0.97
PRPF19-204ENST00000539960 TIAM1Q13009 1591 aa21.1■□□□□ 0.97
PRPF19-204ENST00000539960 EHBP1L1Q8N3D4 1523 aa21.08■□□□□ 0.96
PRPF19-204ENST00000539960 CCNB3Q8WWL7 1395 aa21.08■□□□□ 0.96
PRPF19-204ENST00000539960 DENND4BO75064 1496 aaPredicted RBP21.07■□□□□ 0.96
PRPF19-204ENST00000539960 MYO5CQ9NQX4 1742 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms