RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 EHMT2Q96KQ7 1210 aa18.58■□□□□ 0.56
VTN-202ENST00000539746 KIAA0586Q9BVV6 1533 aa18.57■□□□□ 0.56
VTN-202ENST00000539746 FBLN2P98095 1184 aa18.55■□□□□ 0.56
VTN-202ENST00000539746 IQGAP2Q13576 1575 aa18.53■□□□□ 0.56
VTN-202ENST00000539746 NUP160Q12769 1436 aa18.51■□□□□ 0.55
VTN-202ENST00000539746 CARMIL2Q6F5E8 1435 aa18.49■□□□□ 0.55
VTN-202ENST00000539746 APLP2Q06481 763 aa18.49■□□□□ 0.55
VTN-202ENST00000539746 FMN1Q68DA7 1419 aa18.47■□□□□ 0.55
VTN-202ENST00000539746 UGGT2Q9NYU1 1516 aa18.44■□□□□ 0.54
VTN-202ENST00000539746 VPS8Q8N3P4 1428 aa18.44■□□□□ 0.54
VTN-202ENST00000539746 ARHGAP35Q9NRY4 1499 aa18.38■□□□□ 0.53
VTN-202ENST00000539746 SAMD9Q5K651 1589 aa18.38■□□□□ 0.53
VTN-202ENST00000539746 CEP170Q5SW79 1584 aa18.38■□□□□ 0.53
VTN-202ENST00000539746 CHD1O14646 1710 aa18.37■□□□□ 0.53
VTN-202ENST00000539746 RANGAP1P46060 587 aaPredicted RBP18.36■□□□□ 0.53
VTN-202ENST00000539746 JPH4Q96JJ6 628 aa18.36■□□□□ 0.53
VTN-202ENST00000539746 OSCARQ8IYS5 282 aa18.34■□□□□ 0.53
VTN-202ENST00000539746 ARAP1Q96P48 1450 aa18.31■□□□□ 0.52
VTN-202ENST00000539746 FYCO1Q9BQS8 1478 aa18.31■□□□□ 0.52
VTN-202ENST00000539746 MAP3K1Q13233 1512 aa18.28■□□□□ 0.52
VTN-202ENST00000539746 KIAA0556O60303 1618 aa18.28■□□□□ 0.52
VTN-202ENST00000539746 CASKIN1Q8WXD9 1431 aa18.27■□□□□ 0.52
VTN-202ENST00000539746 CLASP1Q7Z460 1538 aa18.26■□□□□ 0.51
VTN-202ENST00000539746 CCDC18Q5T9S5 1454 aa18.25■□□□□ 0.51
VTN-202ENST00000539746 FHOD3Q2V2M9 1422 aa18.24■□□□□ 0.51
VTN-202ENST00000539746 PRG4Q92954 1404 aaPredicted RBP18.24■□□□□ 0.51
VTN-202ENST00000539746 SHROOM2Q13796 1616 aa18.24■□□□□ 0.51
VTN-202ENST00000539746 DISP1Q96F81 1524 aa18.23■□□□□ 0.51
VTN-202ENST00000539746 CDK11AQ9UQ88 783 aaPredicted RBP18.22■□□□□ 0.51
VTN-202ENST00000539746 HECW1Q76N89 1606 aa18.2■□□□□ 0.5
VTN-202ENST00000539746 P3H3Q8IVL6 736 aa18.19■□□□□ 0.5
VTN-202ENST00000539746 PTPRGP23470 1445 aa18.18■□□□□ 0.5
VTN-202ENST00000539746 ATP1B4Q9UN42 357 aaPredicted RBP18.13■□□□□ 0.49
VTN-202ENST00000539746 PCF11O94913 1555 aaKnown RBP18.12■□□□□ 0.49
VTN-202ENST00000539746 RAPGEF6Q8TEU7 1601 aa18.1■□□□□ 0.49
VTN-202ENST00000539746 TIAM1Q13009 1591 aa18.09■□□□□ 0.49
VTN-202ENST00000539746 UACAQ9BZF9 1416 aa18.07■□□□□ 0.48
VTN-202ENST00000539746 MTUS2Q5JR59 1369 aa18.07■□□□□ 0.48
VTN-202ENST00000539746 TRIM26Q12899 539 aaPredicted RBP18.07■□□□□ 0.48
VTN-202ENST00000539746 CFAP43Q8NDM7 1665 aa18.06■□□□□ 0.48
VTN-202ENST00000539746 UHRF1BP1LA0JNW5 1464 aa18.04■□□□□ 0.48
VTN-202ENST00000539746 EPRSP07814 1512 aaKnown RBP18.03■□□□□ 0.48
VTN-202ENST00000539746 EHBP1L1Q8N3D4 1523 aa18.03■□□□□ 0.48
VTN-202ENST00000539746 LRRC9Q6ZRR7 1453 aa18.02■□□□□ 0.48
VTN-202ENST00000539746 ABCA8O94911 1581 aa18.02■□□□□ 0.48
VTN-202ENST00000539746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.01■□□□□ 0.47
VTN-202ENST00000539746 HNRNPUL2Q1KMD3 747 aaKnown RBP18.01■□□□□ 0.47
VTN-202ENST00000539746 ABCC2Q92887 1545 aa18■□□□□ 0.47
VTN-202ENST00000539746 PLEKHD1A6NEE1 506 aa17.99■□□□□ 0.47
VTN-202ENST00000539746 NPM1P06748 294 aaKnown RBP eCLIP17.99■□□□□ 0.47
VTN-202ENST00000539746 NUP153P49790 1475 aaKnown RBP17.98■□□□□ 0.47
VTN-202ENST00000539746 TTBK1Q5TCY1 1321 aaPredicted RBP17.97■□□□□ 0.47
VTN-202ENST00000539746 PLB1Q6P1J6 1458 aa17.96■□□□□ 0.47
VTN-202ENST00000539746 SUPT6HQ7KZ85 1726 aaKnown RBP17.93■□□□□ 0.46
VTN-202ENST00000539746 TROQ12816 1431 aaPredicted RBP17.91■□□□□ 0.46
VTN-202ENST00000539746 ARHGEF11O15085 1522 aa17.89■□□□□ 0.45
VTN-202ENST00000539746 KDM5BQ9UGL1 1544 aa17.88■□□□□ 0.45
VTN-202ENST00000539746 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.88■□□□□ 0.45
VTN-202ENST00000539746 ATP10BO94823 1461 aa17.87■□□□□ 0.45
VTN-202ENST00000539746 CDK13Q14004 1512 aaKnown RBP17.85■□□□□ 0.45
VTN-202ENST00000539746 KIF14Q15058 1648 aa17.85■□□□□ 0.45
VTN-202ENST00000539746 KANK4Q5T7N3 995 aaPredicted RBP17.85■□□□□ 0.45
VTN-202ENST00000539746 ERCC6L2Q5T890 1561 aa17.85■□□□□ 0.45
VTN-202ENST00000539746 MIA2Q96PC5 1412 aa17.84■□□□□ 0.45
VTN-202ENST00000539746 CCNB3Q8WWL7 1395 aa17.84■□□□□ 0.45
VTN-202ENST00000539746 NCOA2Q15596 1464 aa17.82■□□□□ 0.44
VTN-202ENST00000539746 RRBP1Q9P2E9 1410 aaKnown RBP17.82■□□□□ 0.44
VTN-202ENST00000539746 ACIN1Q9UKV3 1341 aaKnown RBP17.82■□□□□ 0.44
VTN-202ENST00000539746 ADCY10Q96PN6 1610 aa17.82■□□□□ 0.44
VTN-202ENST00000539746 MYOM3Q5VTT5 1437 aa17.81■□□□□ 0.44
VTN-202ENST00000539746 PPARGC1BQ86YN6 1023 aaKnown RBP17.79■□□□□ 0.44
VTN-202ENST00000539746 ITSN2Q9NZM3 1697 aa17.79■□□□□ 0.44
VTN-202ENST00000539746 PCGF6Q9BYE7 350 aa17.77■□□□□ 0.44
VTN-202ENST00000539746 LRRIQ1Q96JM4 1722 aa17.77■□□□□ 0.44
VTN-202ENST00000539746 RIMBP3CA6NJZ7 1639 aa17.76■□□□□ 0.43
VTN-202ENST00000539746 RIMBP3BA6NNM3 1639 aa17.76■□□□□ 0.43
VTN-202ENST00000539746 ZCCHC11Q5TAX3 1644 aaKnown RBP17.76■□□□□ 0.43
VTN-202ENST00000539746 RIMBP3Q9UFD9 1639 aa17.76■□□□□ 0.43
VTN-202ENST00000539746 WDR7Q9Y4E6 1490 aa17.75■□□□□ 0.43
VTN-202ENST00000539746 FGD6Q6ZV73 1430 aa17.75■□□□□ 0.43
VTN-202ENST00000539746 ARID3CA6NKF2 412 aa17.74■□□□□ 0.43
VTN-202ENST00000539746 RSPH4AQ5TD94 716 aa17.73■□□□□ 0.43
VTN-202ENST00000539746 PLEKHH2Q8IVE3 1493 aa17.72■□□□□ 0.43
VTN-202ENST00000539746 PHLDB1Q86UU1 1377 aa17.72■□□□□ 0.43
VTN-202ENST00000539746 CFDP1Q9UEE9 299 aaPredicted RBP17.71■□□□□ 0.43
VTN-202ENST00000539746 MAPKBP1O60336 1514 aa17.7■□□□□ 0.42
VTN-202ENST00000539746 MAGI3Q5TCQ9 1506 aa17.7■□□□□ 0.42
VTN-202ENST00000539746 ARAP3Q8WWN8 1544 aa17.7■□□□□ 0.42
VTN-202ENST00000539746 CYB5RLQ6IPT4 315 aa17.69■□□□□ 0.42
VTN-202ENST00000539746 FAM50AQ14320 339 aaKnown RBP17.68■□□□□ 0.42
VTN-202ENST00000539746 ASXL2Q76L83 1435 aa17.68■□□□□ 0.42
VTN-202ENST00000539746 TCOF1Q13428 1488 aaKnown RBP17.68■□□□□ 0.42
VTN-202ENST00000539746 PTPN23Q9H3S7 1636 aa17.65■□□□□ 0.42
VTN-202ENST00000539746 ABCC10Q5T3U5 1492 aa17.64■□□□□ 0.41
VTN-202ENST00000539746 EFCAB2Q5VUJ9 269 aa17.64■□□□□ 0.41
VTN-202ENST00000539746 GPATCH8Q9UKJ3 1502 aaKnown RBP17.63■□□□□ 0.41
VTN-202ENST00000539746 KCNH8Q96L42 1107 aa17.61■□□□□ 0.41
VTN-202ENST00000539746 PLCH2O75038 1416 aa17.61■□□□□ 0.41
VTN-202ENST00000539746 CFAP74Q9C0B2 1584 aa17.61■□□□□ 0.41
VTN-202ENST00000539746 MYO5CQ9NQX4 1742 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms