RNA–Protein interactions for RNA: ENST00000539476.5

PITPNA-202, Transcript of phosphatidylinositol transfer protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PITPNA, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNA-202ENST00000539476 MRC2Q9UBG0 1479 aa24.78■■□□□ 1.56
PITPNA-202ENST00000539476 TARBP1Q13395 1621 aaKnown RBP24.76■■□□□ 1.55
PITPNA-202ENST00000539476 TSHZ2Q9NRE2 1034 aa24.76■■□□□ 1.55
PITPNA-202ENST00000539476 ANP32EQ9BTT0 268 aa24.75■■□□□ 1.55
PITPNA-202ENST00000539476 BCL11AQ9H165 835 aa24.75■■□□□ 1.55
PITPNA-202ENST00000539476 FKBP8Q14318 412 aa24.75■■□□□ 1.55
PITPNA-202ENST00000539476 CLIP1P30622 1438 aa24.74■■□□□ 1.55
PITPNA-202ENST00000539476 ABCA5Q8WWZ7 1642 aa24.74■■□□□ 1.55
PITPNA-202ENST00000539476 CARMIL1Q5VZK9 1371 aa24.71■■□□□ 1.55
PITPNA-202ENST00000539476 KCNH8Q96L42 1107 aa24.71■■□□□ 1.55
PITPNA-202ENST00000539476 NEFLP07196 543 aa24.69■■□□□ 1.54
PITPNA-202ENST00000539476 WDR62O43379 1518 aa24.68■■□□□ 1.54
PITPNA-202ENST00000539476 TDRD9Q8NDG6 1382 aaKnown RBP24.66■■□□□ 1.54
PITPNA-202ENST00000539476 CUL7Q14999 1698 aa24.63■■□□□ 1.53
PITPNA-202ENST00000539476 THOC2Q8NI27 1593 aaKnown RBP24.62■■□□□ 1.53
PITPNA-202ENST00000539476 ERICH6Q7L0X2 663 aa24.62■■□□□ 1.53
PITPNA-202ENST00000539476 HIRIP3Q9BW71 556 aaPredicted RBP24.61■■□□□ 1.53
PITPNA-202ENST00000539476 GAPVD1Q14C86 1478 aa24.61■■□□□ 1.53
PITPNA-202ENST00000539476 TRIM52Q96A61 297 aa24.58■■□□□ 1.53
PITPNA-202ENST00000539476 ERCC6Q03468 1493 aa24.58■■□□□ 1.53
PITPNA-202ENST00000539476 ARAP1Q96P48 1450 aa24.58■■□□□ 1.52
PITPNA-202ENST00000539476 VPS8Q8N3P4 1428 aa24.56■■□□□ 1.52
PITPNA-202ENST00000539476 DDX10Q13206 875 aaKnown RBP24.54■■□□□ 1.52
PITPNA-202ENST00000539476 PBRM1Q86U86 1689 aa24.53■■□□□ 1.52
PITPNA-202ENST00000539476 ARHGAP35Q9NRY4 1499 aa24.51■■□□□ 1.51
PITPNA-202ENST00000539476 ATP1B4Q9UN42 357 aaPredicted RBP24.51■■□□□ 1.51
PITPNA-202ENST00000539476 AQRO60306 1485 aaKnown RBP eCLIP24.5■■□□□ 1.51
PITPNA-202ENST00000539476 ZNF608Q9ULD9 1512 aaPredicted RBP24.48■■□□□ 1.51
PITPNA-202ENST00000539476 IFT140Q96RY7 1462 aa24.48■■□□□ 1.51
PITPNA-202ENST00000539476 CTTNBP2Q8WZ74 1663 aa24.45■■□□□ 1.5
PITPNA-202ENST00000539476 IRX6P78412 446 aaPredicted RBP24.45■■□□□ 1.5
PITPNA-202ENST00000539476 ADAMTS12P58397 1594 aa24.38■■□□□ 1.49
PITPNA-202ENST00000539476 EIF4G3O43432 1585 aaKnown RBP24.37■■□□□ 1.49
PITPNA-202ENST00000539476 GRIN2BQ13224 1484 aa24.35■■□□□ 1.49
PITPNA-202ENST00000539476 CNGB1Q14028 1251 aaPredicted RBP24.33■■□□□ 1.49
PITPNA-202ENST00000539476 RBM19Q9Y4C8 960 aaKnown RBP24.33■■□□□ 1.48
PITPNA-202ENST00000539476 CLSPNQ9HAW4 1339 aa24.31■■□□□ 1.48
PITPNA-202ENST00000539476 FHAD1B1AJZ9 1412 aa24.31■■□□□ 1.48
PITPNA-202ENST00000539476 FAM50AQ14320 339 aaKnown RBP24.24■■□□□ 1.47
PITPNA-202ENST00000539476 KANK4Q5T7N3 995 aaPredicted RBP24.24■■□□□ 1.47
PITPNA-202ENST00000539476 SNAPC4Q5SXM2 1469 aa24.23■■□□□ 1.47
PITPNA-202ENST00000539476 EFCAB5A4FU69 1503 aa24.23■■□□□ 1.47
PITPNA-202ENST00000539476 SAMD9Q5K651 1589 aa24.21■■□□□ 1.47
PITPNA-202ENST00000539476 FHOD3Q2V2M9 1422 aa24.2■■□□□ 1.47
PITPNA-202ENST00000539476 P3H3Q8IVL6 736 aa24.2■■□□□ 1.46
PITPNA-202ENST00000539476 SIN3AQ96ST3 1273 aa24.2■■□□□ 1.46
PITPNA-202ENST00000539476 ANP32CO43423 234 aa24.16■■□□□ 1.46
PITPNA-202ENST00000539476 PCF11O94913 1555 aaKnown RBP24.16■■□□□ 1.46
PITPNA-202ENST00000539476 DHX57Q6P158 1386 aaKnown RBP24.15■■□□□ 1.46
PITPNA-202ENST00000539476 IQGAP2Q13576 1575 aa24.12■■□□□ 1.45
PITPNA-202ENST00000539476 MAGI1Q96QZ7 1491 aaPredicted RBP24.12■■□□□ 1.45
PITPNA-202ENST00000539476 GRIN2AQ12879 1464 aa24.11■■□□□ 1.45
PITPNA-202ENST00000539476 TIAM1Q13009 1591 aa24.09■■□□□ 1.45
PITPNA-202ENST00000539476 CDK11AQ9UQ88 783 aaPredicted RBP24.08■■□□□ 1.45
PITPNA-202ENST00000539476 HNRNPUQ00839 825 aaKnown RBP eCLIP24.08■■□□□ 1.451e-10■■■□□ 17.4
PITPNA-202ENST00000539476 MAP3K1Q13233 1512 aa24.06■■□□□ 1.44
PITPNA-202ENST00000539476 NBR1Q14596 966 aa24.05■■□□□ 1.44
PITPNA-202ENST00000539476 CFAP43Q8NDM7 1665 aa24.05■■□□□ 1.44
PITPNA-202ENST00000539476 SYNJ2O15056 1496 aa24.05■■□□□ 1.44
PITPNA-202ENST00000539476 CEP170Q5SW79 1584 aa24.03■■□□□ 1.44
PITPNA-202ENST00000539476 FYCO1Q9BQS8 1478 aa24.02■■□□□ 1.44
PITPNA-202ENST00000539476 CASKIN1Q8WXD9 1431 aa24.02■■□□□ 1.44
PITPNA-202ENST00000539476 LRRIQ1Q96JM4 1722 aa24.02■■□□□ 1.44
PITPNA-202ENST00000539476 SENP3-EIF4A1A0A087X0R7 540 aa24.02■■□□□ 1.44
PITPNA-202ENST00000539476 UGGT2Q9NYU1 1516 aa24■■□□□ 1.43
PITPNA-202ENST00000539476 KIAA0586Q9BVV6 1533 aa24■■□□□ 1.43
PITPNA-202ENST00000539476 FMN1Q68DA7 1419 aa23.99■■□□□ 1.43
PITPNA-202ENST00000539476 LRRC9Q6ZRR7 1453 aa23.96■■□□□ 1.43
PITPNA-202ENST00000539476 CHMP7Q8WUX9 453 aaPredicted RBP23.93■■□□□ 1.42
PITPNA-202ENST00000539476 DISP1Q96F81 1524 aa23.93■■□□□ 1.42
PITPNA-202ENST00000539476 NUP160Q12769 1436 aa23.92■■□□□ 1.42
PITPNA-202ENST00000539476 MSH5O43196 834 aa23.92■■□□□ 1.42
PITPNA-202ENST00000539476 KIAA0556O60303 1618 aa23.9■■□□□ 1.42
PITPNA-202ENST00000539476 POLR3GLQ9BT43 218 aa23.89■■□□□ 1.41
PITPNA-202ENST00000539476 RRBP1Q9P2E9 1410 aaKnown RBP23.88■■□□□ 1.41
PITPNA-202ENST00000539476 FBLN2P98095 1184 aa23.88■■□□□ 1.41
PITPNA-202ENST00000539476 CHD1O14646 1710 aa23.84■■□□□ 1.41
PITPNA-202ENST00000539476 FAM9BQ8IZU0 186 aa23.83■■□□□ 1.41
PITPNA-202ENST00000539476 B4GALNT3Q6L9W6 998 aa23.81■■□□□ 1.4
PITPNA-202ENST00000539476 PHLDB1Q86UU1 1377 aa23.81■■□□□ 1.4
PITPNA-202ENST00000539476 RAB3GAP2Q9H2M9 1393 aa23.8■■□□□ 1.4
PITPNA-202ENST00000539476 CCNB3Q8WWL7 1395 aa23.79■■□□□ 1.4
PITPNA-202ENST00000539476 HECW1Q76N89 1606 aa23.77■■□□□ 1.4
PITPNA-202ENST00000539476 MAGI3Q5TCQ9 1506 aa23.76■■□□□ 1.39
PITPNA-202ENST00000539476 DEKP35659 375 aaKnown RBP23.76■■□□□ 1.39
PITPNA-202ENST00000539476 JPH4Q96JJ6 628 aa23.72■■□□□ 1.39
PITPNA-202ENST00000539476 EPRSP07814 1512 aaKnown RBP23.72■■□□□ 1.39
PITPNA-202ENST00000539476 RTN4Q9NQC3 1192 aaKnown RBP23.71■■□□□ 1.39
PITPNA-202ENST00000539476 CDK13Q14004 1512 aaKnown RBP23.7■■□□□ 1.39
PITPNA-202ENST00000539476 CCDC18Q5T9S5 1454 aa23.7■■□□□ 1.38
PITPNA-202ENST00000539476 RAPGEF6Q8TEU7 1601 aa23.68■■□□□ 1.38
PITPNA-202ENST00000539476 TONSLQ96HA7 1378 aa23.67■■□□□ 1.38
PITPNA-202ENST00000539476 NPM2Q86SE8 214 aaKnown RBP23.67■■□□□ 1.38
PITPNA-202ENST00000539476 NUP153P49790 1475 aaKnown RBP23.66■■□□□ 1.38
PITPNA-202ENST00000539476 EHBP1L1Q8N3D4 1523 aa23.66■■□□□ 1.38
PITPNA-202ENST00000539476 RTL5Q5HYW3 569 aaPredicted RBP23.66■■□□□ 1.38
PITPNA-202ENST00000539476 MTUS2Q5JR59 1369 aa23.66■■□□□ 1.38
PITPNA-202ENST00000539476 SUPT6HQ7KZ85 1726 aaKnown RBP23.63■■□□□ 1.37
PITPNA-202ENST00000539476 ARHGEF11O15085 1522 aa23.63■■□□□ 1.37
PITPNA-202ENST00000539476 NCOA2Q15596 1464 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms