RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 PRG4Q92954 1404 aaPredicted RBP38.45■■■■□ 3.75
SCARB1-206ENST00000539320 JPH4Q96JJ6 628 aa38.4■■■■□ 3.74
SCARB1-206ENST00000539320 KIAA0586Q9BVV6 1533 aa38.33■■■■□ 3.73
SCARB1-206ENST00000539320 CARMIL1Q5VZK9 1371 aa38.3■■■■□ 3.72
SCARB1-206ENST00000539320 IQGAP2Q13576 1575 aa38.04■■■■□ 3.68
SCARB1-206ENST00000539320 RAPGEF2Q9Y4G8 1499 aa38.02■■■■□ 3.68
SCARB1-206ENST00000539320 ADCY10Q96PN6 1610 aa37.98■■■■□ 3.67
SCARB1-206ENST00000539320 CARMIL2Q6F5E8 1435 aa37.94■■■■□ 3.66
SCARB1-206ENST00000539320 MAPKBP1O60336 1514 aa37.89■■■■□ 3.66
SCARB1-206ENST00000539320 PTPRGP23470 1445 aa37.88■■■■□ 3.66
SCARB1-206ENST00000539320 NPM1P06748 294 aaKnown RBP eCLIP37.88■■■■□ 3.65
SCARB1-206ENST00000539320 KIF13AQ9H1H9 1805 aa37.88■■■■□ 3.65
SCARB1-206ENST00000539320 TNIKQ9UKE5 1360 aa37.87■■■■□ 3.65
SCARB1-206ENST00000539320 UGGT2Q9NYU1 1516 aa37.81■■■■□ 3.64
SCARB1-206ENST00000539320 DISP1Q96F81 1524 aa37.8■■■■□ 3.64
SCARB1-206ENST00000539320 ABCC10Q5T3U5 1492 aa37.79■■■■□ 3.64
SCARB1-206ENST00000539320 TTBK1Q5TCY1 1321 aaPredicted RBP37.76■■■■□ 3.64
SCARB1-206ENST00000539320 DIP2BQ9P265 1576 aa37.73■■■■□ 3.63
SCARB1-206ENST00000539320 PRXQ9BXM0 1461 aa37.72■■■■□ 3.63
SCARB1-206ENST00000539320 CTTNBP2Q8WZ74 1663 aa37.72■■■■□ 3.63
SCARB1-206ENST00000539320 KIAA0556O60303 1618 aa37.7■■■■□ 3.63
SCARB1-206ENST00000539320 FAM69CQ0P6D2 419 aa37.68■■■■□ 3.62
SCARB1-206ENST00000539320 ABCC2Q92887 1545 aa37.67■■■■□ 3.62
SCARB1-206ENST00000539320 UHRF1BP1LA0JNW5 1464 aa37.64■■■■□ 3.62
SCARB1-206ENST00000539320 UACAQ9BZF9 1416 aa37.62■■■■□ 3.61
SCARB1-206ENST00000539320 GOLGA3Q08378 1498 aa37.52■■■■□ 3.6
SCARB1-206ENST00000539320 ASXL2Q76L83 1435 aa37.49■■■■□ 3.59
SCARB1-206ENST00000539320 PLB1Q6P1J6 1458 aa37.49■■■■□ 3.59
SCARB1-206ENST00000539320 KDM5BQ9UGL1 1544 aa37.46■■■■□ 3.59
SCARB1-206ENST00000539320 EEA1Q15075 1411 aa37.44■■■■□ 3.58
SCARB1-206ENST00000539320 CSRNP3Q8WYN3 585 aa37.44■■■■□ 3.58
SCARB1-206ENST00000539320 ZCCHC11Q5TAX3 1644 aaKnown RBP37.39■■■■□ 3.58
SCARB1-206ENST00000539320 TSPOAP1O95153 1857 aa37.39■■■■□ 3.58
SCARB1-206ENST00000539320 GLI2P10070 1586 aa37.37■■■■□ 3.57
SCARB1-206ENST00000539320 ABCA8O94911 1581 aa37.31■■■■□ 3.56
SCARB1-206ENST00000539320 KDM6BO15054 1643 aa37.3■■■■□ 3.56
SCARB1-206ENST00000539320 EPRSP07814 1512 aaKnown RBP37.28■■■■□ 3.56
SCARB1-206ENST00000539320 PPRC1Q5VV67 1664 aaKnown RBP37.22■■■■□ 3.55
SCARB1-206ENST00000539320 WDR7Q9Y4E6 1490 aa37.21■■■■□ 3.55
SCARB1-206ENST00000539320 SAMD9Q5K651 1589 aa37.21■■■■□ 3.55
SCARB1-206ENST00000539320 MAP3K4Q9Y6R4 1608 aa37.17■■■■□ 3.54
SCARB1-206ENST00000539320 AEBP2Q6ZN18 517 aaPredicted RBP37.16■■■■□ 3.54
SCARB1-206ENST00000539320 FAM9AQ8IZU1 332 aaPredicted RBP37.16■■■■□ 3.54
SCARB1-206ENST00000539320 KIF21BO75037 1637 aa37.13■■■■□ 3.53
SCARB1-206ENST00000539320 P3H3Q8IVL6 736 aa37.12■■■■□ 3.53
SCARB1-206ENST00000539320 TEX14Q8IWB6 1497 aa37.07■■■■□ 3.52
SCARB1-206ENST00000539320 CHIC1Q5VXU3 224 aa37.05■■■■□ 3.52
SCARB1-206ENST00000539320 RAPGEF6Q8TEU7 1601 aa36.98■■■■□ 3.51
SCARB1-206ENST00000539320 CFAP43Q8NDM7 1665 aa36.96■■■■□ 3.51
SCARB1-206ENST00000539320 ATP10BO94823 1461 aa36.95■■■■□ 3.51
SCARB1-206ENST00000539320 FHOD3Q2V2M9 1422 aa36.95■■■■□ 3.51
SCARB1-206ENST00000539320 ARID3CA6NKF2 412 aa36.94■■■■□ 3.5
SCARB1-206ENST00000539320 RANGAP1P46060 587 aaPredicted RBP36.93■■■■□ 3.5
SCARB1-206ENST00000539320 EFCAB5A4FU69 1503 aa36.92■■■■□ 3.5
SCARB1-206ENST00000539320 KCNH8Q96L42 1107 aa36.91■■■■□ 3.5
SCARB1-206ENST00000539320 CD109Q6YHK3 1445 aa36.91■■■■□ 3.5
SCARB1-206ENST00000539320 COL17A1Q9UMD9 1497 aaPredicted RBP36.9■■■■□ 3.5
SCARB1-206ENST00000539320 MAGI3Q5TCQ9 1506 aa36.9■■■■□ 3.5
SCARB1-206ENST00000539320 NUP153P49790 1475 aaKnown RBP36.84■■■■□ 3.49
SCARB1-206ENST00000539320 ABCA9Q8IUA7 1624 aa36.74■■■■□ 3.47
SCARB1-206ENST00000539320 UBTFP17480 764 aaKnown RBP36.74■■■■□ 3.47
SCARB1-206ENST00000539320 EHMT2Q96KQ7 1210 aa36.73■■■■□ 3.47
SCARB1-206ENST00000539320 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.72■■■■□ 3.47
SCARB1-206ENST00000539320 HNRNPUL2Q1KMD3 747 aaKnown RBP36.72■■■■□ 3.47
SCARB1-206ENST00000539320 KDM4FA0A1W2PPD8 638 aa36.69■■■■□ 3.46
SCARB1-206ENST00000539320 ARHGAP35Q9NRY4 1499 aa36.6■■■■□ 3.45
SCARB1-206ENST00000539320 ARAP3Q8WWN8 1544 aa36.58■■■■□ 3.45
SCARB1-206ENST00000539320 ADGRL1O94910 1474 aa36.56■■■■□ 3.44
SCARB1-206ENST00000539320 FMN1Q68DA7 1419 aa36.55■■■■□ 3.44
SCARB1-206ENST00000539320 PHLDB1Q86UU1 1377 aa36.54■■■■□ 3.44
SCARB1-206ENST00000539320 PLEKHD1A6NEE1 506 aa36.54■■■■□ 3.44
SCARB1-206ENST00000539320 NEO1Q92859 1461 aa36.52■■■■□ 3.44
SCARB1-206ENST00000539320 CDK13Q14004 1512 aaKnown RBP36.52■■■■□ 3.44
SCARB1-206ENST00000539320 HECW1Q76N89 1606 aa36.5■■■■□ 3.43
SCARB1-206ENST00000539320 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.43■■■■□ 3.422e-7■■■■□ 22.7
SCARB1-206ENST00000539320 TTC37Q6PGP7 1564 aa36.4■■■■□ 3.42
SCARB1-206ENST00000539320 ATP1B4Q9UN42 357 aaPredicted RBP36.35■■■■□ 3.41
SCARB1-206ENST00000539320 CFAP74Q9C0B2 1584 aa36.35■■■■□ 3.41
SCARB1-206ENST00000539320 FRMPD1Q5SYB0 1578 aa36.34■■■■□ 3.41
SCARB1-206ENST00000539320 FANCAO15360 1455 aa36.32■■■■□ 3.41
SCARB1-206ENST00000539320 RAPGEF3O95398 923 aa36.31■■■■□ 3.4
SCARB1-206ENST00000539320 AKNAQ7Z591 1439 aa36.27■■■■□ 3.4
SCARB1-206ENST00000539320 DENND4BO75064 1496 aaPredicted RBP36.25■■■■□ 3.39
SCARB1-206ENST00000539320 CDK11AQ9UQ88 783 aaPredicted RBP36.24■■■■□ 3.39
SCARB1-206ENST00000539320 PCF11O94913 1555 aaKnown RBP36.23■■■■□ 3.39
SCARB1-206ENST00000539320 RICTORQ6R327 1708 aa36.21■■■■□ 3.39
SCARB1-206ENST00000539320 LRRIQ1Q96JM4 1722 aa36.21■■■■□ 3.39
SCARB1-206ENST00000539320 TROQ12816 1431 aaPredicted RBP36.2■■■■□ 3.39
SCARB1-206ENST00000539320 KIF14Q15058 1648 aa36.19■■■■□ 3.38
SCARB1-206ENST00000539320 CASKIN1Q8WXD9 1431 aa36.19■■■■□ 3.38
SCARB1-206ENST00000539320 PLCH2O75038 1416 aa36.18■■■■□ 3.38
SCARB1-206ENST00000539320 ARHGEF40Q8TER5 1519 aa36.18■■■■□ 3.38
SCARB1-206ENST00000539320 CLIP1P30622 1438 aa36.16■■■■□ 3.38
SCARB1-206ENST00000539320 MYO5CQ9NQX4 1742 aa36.15■■■■□ 3.38
SCARB1-206ENST00000539320 CCDC18Q5T9S5 1454 aa36.15■■■■□ 3.38
SCARB1-206ENST00000539320 ZMYM4Q5VZL5 1548 aa36.13■■■■□ 3.37
SCARB1-206ENST00000539320 FYCO1Q9BQS8 1478 aa36.1■■■■□ 3.37
SCARB1-206ENST00000539320 POGZQ7Z3K3 1410 aa36.05■■■■□ 3.36
SCARB1-206ENST00000539320 SCAPERQ9BY12 1400 aa36.04■■■■□ 3.36
SCARB1-206ENST00000539320 ADAMTSL3P82987 1691 aa36.03■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms