RNA–Protein interactions for RNA: ENST00000539049.5

DDX11-213, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 3,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-213ENST00000539049 UNC13AQ9UPW8 1703 aa15.2■□□□□ 0.02
DDX11-213ENST00000539049 VSIG10Q8N0Z9 540 aa15.19■□□□□ 0.02
DDX11-213ENST00000539049 HIRIP3Q9BW71 556 aaPredicted RBP15.19■□□□□ 0.02
DDX11-213ENST00000539049 GOLGA3Q08378 1498 aa15.18■□□□□ 0.02
DDX11-213ENST00000539049 BICRAQ9NZM4 1560 aa15.14■□□□□ 0.01
DDX11-213ENST00000539049 RSPH6AQ9H0K4 717 aa15.14■□□□□ 0.01
DDX11-213ENST00000539049 P3H3Q8IVL6 736 aa15.13■□□□□ 0.01
DDX11-213ENST00000539049 TRIM52Q96A61 297 aa15.11■□□□□ 0.01
DDX11-213ENST00000539049 C11orf95C9JLR9 678 aaPredicted RBP15.11■□□□□ 0.01
DDX11-213ENST00000539049 IRX6P78412 446 aaPredicted RBP15.08■□□□□ 0
DDX11-213ENST00000539049 BRPF3Q9ULD4 1205 aa15.07■□□□□ 0
DDX11-213ENST00000539049 ZBTB47Q9UFB7 747 aaPredicted RBP15.07■□□□□ 0
DDX11-213ENST00000539049 ANP32AP39687 249 aaKnown RBP15.06■□□□□ 0
DDX11-213ENST00000539049 CLIP1P30622 1438 aa15.06■□□□□ 0
DDX11-213ENST00000539049 CEP164Q9UPV0 1460 aa15.05■□□□□ 0
DDX11-213ENST00000539049 A0A0U1RQG5 324 aaPredicted RBP15.05■□□□□ -0
DDX11-213ENST00000539049 FAM50AQ14320 339 aaKnown RBP15.03■□□□□ -0
DDX11-213ENST00000539049 WASHC2AQ641Q2 1341 aa15.03■□□□□ -0
DDX11-213ENST00000539049 NEFMP07197 916 aa15.02■□□□□ -0
DDX11-213ENST00000539049 IPO9Q96P70 1041 aaKnown RBP15.01□□□□□ -0.01
DDX11-213ENST00000539049 WASHC2CQ9Y4E1 1318 aa14.99□□□□□ -0.01
DDX11-213ENST00000539049 VPS8Q8N3P4 1428 aa14.99□□□□□ -0.01
DDX11-213ENST00000539049 SYNJ1O43426 1573 aa14.99□□□□□ -0.01
DDX11-213ENST00000539049 KIF21BO75037 1637 aa14.98□□□□□ -0.01
DDX11-213ENST00000539049 PPP4R2Q9NY27 417 aa14.97□□□□□ -0.01
DDX11-213ENST00000539049 ARID3CA6NKF2 412 aa14.97□□□□□ -0.01
DDX11-213ENST00000539049 SENP3-EIF4A1A0A087X0R7 540 aa14.96□□□□□ -0.01
DDX11-213ENST00000539049 USP35Q9P2H5 1018 aa14.96□□□□□ -0.01
DDX11-213ENST00000539049 PDE4CQ08493 712 aa14.95□□□□□ -0.02
DDX11-213ENST00000539049 RAPGEF2Q9Y4G8 1499 aa14.94□□□□□ -0.02
DDX11-213ENST00000539049 DDX10Q13206 875 aaKnown RBP14.94□□□□□ -0.02
DDX11-213ENST00000539049 RBM10P98175 930 aaKnown RBP14.9□□□□□ -0.02
DDX11-213ENST00000539049 LAS1LQ9Y4W2 734 aaKnown RBP14.9□□□□□ -0.02
DDX11-213ENST00000539049 BAZ1BQ9UIG0 1483 aaKnown RBP14.9□□□□□ -0.02
DDX11-213ENST00000539049 FGD1P98174 961 aa14.9□□□□□ -0.02
DDX11-213ENST00000539049 KANK4Q5T7N3 995 aaPredicted RBP14.9□□□□□ -0.02
DDX11-213ENST00000539049 POLR3GLQ9BT43 218 aa14.89□□□□□ -0.03
DDX11-213ENST00000539049 B4GALNT3Q6L9W6 998 aa14.89□□□□□ -0.03
DDX11-213ENST00000539049 PEG3Q9GZU2 1588 aa14.87□□□□□ -0.03
DDX11-213ENST00000539049 AAMPQ13685 434 aa14.87□□□□□ -0.03
DDX11-213ENST00000539049 FAM43AQ8N2R8 423 aa14.87□□□□□ -0.03
DDX11-213ENST00000539049 HSP90AA2PQ14568 343 aaPredicted RBP14.86□□□□□ -0.03
DDX11-213ENST00000539049 GSE1Q14687 1217 aa14.85□□□□□ -0.03
DDX11-213ENST00000539049 CCER2I3L3R5 266 aa14.85□□□□□ -0.03
DDX11-213ENST00000539049 SIN3AQ96ST3 1273 aa14.85□□□□□ -0.03
DDX11-213ENST00000539049 ATAD2BQ9ULI0 1458 aa14.82□□□□□ -0.04
DDX11-213ENST00000539049 PPM1GO15355 546 aaPredicted RBP14.82□□□□□ -0.04
DDX11-213ENST00000539049 ANP32CO43423 234 aa14.82□□□□□ -0.04
DDX11-213ENST00000539049 PDIA4P13667 645 aaKnown RBP14.82□□□□□ -0.04
DDX11-213ENST00000539049 DHX57Q6P158 1386 aaKnown RBP14.82□□□□□ -0.04
DDX11-213ENST00000539049 HNRNPUQ00839 825 aaKnown RBP eCLIP14.8□□□□□ -0.04
DDX11-213ENST00000539049 RRP9O43818 475 aaKnown RBP14.79□□□□□ -0.04
DDX11-213ENST00000539049 NPM2Q86SE8 214 aaKnown RBP14.76□□□□□ -0.05
DDX11-213ENST00000539049 BCL11BQ9C0K0 894 aaPredicted RBP14.75□□□□□ -0.05
DDX11-213ENST00000539049 HSP90AA1P07900 732 aaKnown RBP14.74□□□□□ -0.05
DDX11-213ENST00000539049 ARAP1Q96P48 1450 aa14.74□□□□□ -0.05
DDX11-213ENST00000539049 TOP2BQ02880 1626 aa14.74□□□□□ -0.05
DDX11-213ENST00000539049 FRAT1Q92837 279 aaPredicted RBP14.73□□□□□ -0.05
DDX11-213ENST00000539049 NAP1L5Q96NT1 182 aaPredicted RBP14.72□□□□□ -0.05
DDX11-213ENST00000539049 PRXQ9BXM0 1461 aa14.7□□□□□ -0.06
DDX11-213ENST00000539049 ERICH3Q5RHP9 1530 aa14.69□□□□□ -0.06
DDX11-213ENST00000539049 CHIC2Q9UKJ5 165 aa14.68□□□□□ -0.06
DDX11-213ENST00000539049 PPP1R15AO75807 674 aaPredicted RBP14.67□□□□□ -0.06
DDX11-213ENST00000539049 RRBP1Q9P2E9 1410 aaKnown RBP14.66□□□□□ -0.06
DDX11-213ENST00000539049 BIVM-ERCC5R4GMW8 1640 aa14.64□□□□□ -0.07
DDX11-213ENST00000539049 ZNF326Q5BKZ1 582 aaKnown RBP14.64□□□□□ -0.07
DDX11-213ENST00000539049 CCNB3Q8WWL7 1395 aa14.64□□□□□ -0.07
DDX11-213ENST00000539049 NCAPD3P42695 1498 aa14.63□□□□□ -0.07
DDX11-213ENST00000539049 CC2D2AQ9P2K1 1620 aa14.62□□□□□ -0.07
DDX11-213ENST00000539049 NFKBIBQ15653 356 aa14.62□□□□□ -0.07
DDX11-213ENST00000539049 DCAF11Q8TEB1 546 aa14.61□□□□□ -0.07
DDX11-213ENST00000539049 KIF27Q86VH2 1401 aa14.61□□□□□ -0.07
DDX11-213ENST00000539049 PNNQ9H307 717 aaKnown RBP14.61□□□□□ -0.07
DDX11-213ENST00000539049 RRAGDQ9NQL2 400 aaPredicted RBP14.6□□□□□ -0.07
DDX11-213ENST00000539049 AEBP2Q6ZN18 517 aaPredicted RBP14.59□□□□□ -0.07
DDX11-213ENST00000539049 CUX1P39880 1505 aa14.58□□□□□ -0.08
DDX11-213ENST00000539049 CUX2O14529 1486 aa14.58□□□□□ -0.08
DDX11-213ENST00000539049 ARHGAP35Q9NRY4 1499 aa14.57□□□□□ -0.08
DDX11-213ENST00000539049 RAB3GAP2Q9H2M9 1393 aa14.56□□□□□ -0.08
DDX11-213ENST00000539049 FAM9BQ8IZU0 186 aa14.56□□□□□ -0.08
DDX11-213ENST00000539049 RGS3P49796 1198 aa14.54□□□□□ -0.08
DDX11-213ENST00000539049 TAF7LQ5H9L4 462 aa14.53□□□□□ -0.08
DDX11-213ENST00000539049 RRP7BPQ9NSQ0 103 aa14.53□□□□□ -0.08
DDX11-213ENST00000539049 CALD1Q05682 793 aaKnown RBP14.53□□□□□ -0.08
DDX11-213ENST00000539049 HMGXB3Q12766 1538 aa14.53□□□□□ -0.08
DDX11-213ENST00000539049 DDRGK1Q96HY6 314 aa14.51□□□□□ -0.09
DDX11-213ENST00000539049 PRDM4Q9UKN5 801 aa14.5□□□□□ -0.09
DDX11-213ENST00000539049 MAPKBP1O60336 1514 aa14.5□□□□□ -0.09
DDX11-213ENST00000539049 FOXD1Q16676 465 aa14.49□□□□□ -0.09
DDX11-213ENST00000539049 DNAJC5BQ9UF47 199 aa14.49□□□□□ -0.09
DDX11-213ENST00000539049 ARID4BQ4LE39 1312 aaPredicted RBP14.48□□□□□ -0.09
DDX11-213ENST00000539049 PDE4AP27815 886 aa14.47□□□□□ -0.09
DDX11-213ENST00000539049 BBXQ8WY36 941 aaPredicted RBP14.47□□□□□ -0.09
DDX11-213ENST00000539049 SETD5Q9C0A6 1442 aa14.46□□□□□ -0.09
DDX11-213ENST00000539049 PDCL3Q9H2J4 239 aa14.45□□□□□ -0.1
DDX11-213ENST00000539049 NAP1L2Q9ULW6 460 aaPredicted RBP14.44□□□□□ -0.1
DDX11-213ENST00000539049 TCERG1O14776 1098 aaKnown RBP14.44□□□□□ -0.1
DDX11-213ENST00000539049 TIAM1Q13009 1591 aa14.44□□□□□ -0.1
DDX11-213ENST00000539049 CLCN1P35523 988 aa14.43□□□□□ -0.1
DDX11-213ENST00000539049 CFTRP13569 1480 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms