RNA–Protein interactions for RNA: ENST00000539049.5

DDX11-213, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 3,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-213ENST00000539049 NISCHQ9Y2I1 1504 aa20.11■□□□□ 0.81
DDX11-213ENST00000539049 PELP1Q8IZL8 1130 aaKnown RBP19.31■□□□□ 0.68
DDX11-213ENST00000539049 MYT1Q01538 1121 aa18.84■□□□□ 0.61
DDX11-213ENST00000539049 HRCP23327 699 aa18.59■□□□□ 0.57
DDX11-213ENST00000539049 SHROOM4Q9ULL8 1493 aa18.22■□□□□ 0.51
DDX11-213ENST00000539049 PPARGC1BQ86YN6 1023 aaKnown RBP18.15■□□□□ 0.5
DDX11-213ENST00000539049 SUPT5HO00267 1087 aaKnown RBP18.11■□□□□ 0.49
DDX11-213ENST00000539049 DCAF8L2P0C7V8 631 aa18.08■□□□□ 0.48
DDX11-213ENST00000539049 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
DDX11-213ENST00000539049 TTBK1Q5TCY1 1321 aaPredicted RBP17.91■□□□□ 0.46
DDX11-213ENST00000539049 PCGF6Q9BYE7 350 aa17.84■□□□□ 0.45
DDX11-213ENST00000539049 EHMT2Q96KQ7 1210 aa17.46■□□□□ 0.39
DDX11-213ENST00000539049 BCL11AQ9H165 835 aa17.45■□□□□ 0.38
DDX11-213ENST00000539049 PRKCSHP14314 528 aaPredicted RBP17.42■□□□□ 0.38
DDX11-213ENST00000539049 ACIN1Q9UKV3 1341 aaKnown RBP17.37■□□□□ 0.37
DDX11-213ENST00000539049 GTF3C3Q9Y5Q9 886 aa17.3■□□□□ 0.36
DDX11-213ENST00000539049 CENPBP07199 599 aaPredicted RBP17.29■□□□□ 0.36
DDX11-213ENST00000539049 NEUROD1Q13562 356 aa17.26■□□□□ 0.35
DDX11-213ENST00000539049 FAM9AQ8IZU1 332 aaPredicted RBP17.24■□□□□ 0.35
DDX11-213ENST00000539049 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
DDX11-213ENST00000539049 MYO15BQ96JP2 1530 aa17.18■□□□□ 0.34
DDX11-213ENST00000539049 ERICH6Q7L0X2 663 aa17.09■□□□□ 0.33
DDX11-213ENST00000539049 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
DDX11-213ENST00000539049 TRIM26Q12899 539 aaPredicted RBP17■□□□□ 0.31
DDX11-213ENST00000539049 LOC105371045A0A1W2PR82 267 aa17■□□□□ 0.31
DDX11-213ENST00000539049 DCAF1Q9Y4B6 1507 aa16.94■□□□□ 0.3
DDX11-213ENST00000539049 CHIC1Q5VXU3 224 aa16.93■□□□□ 0.3
DDX11-213ENST00000539049 ANP32EQ9BTT0 268 aa16.88■□□□□ 0.29
DDX11-213ENST00000539049 CCDC180Q9P1Z9 1646 aa16.86■□□□□ 0.29
DDX11-213ENST00000539049 APLP2Q06481 763 aa16.84■□□□□ 0.29
DDX11-213ENST00000539049 CSRNP3Q8WYN3 585 aa16.71■□□□□ 0.27
DDX11-213ENST00000539049 DIEXFQ68CQ4 756 aaKnown RBP16.64■□□□□ 0.25
DDX11-213ENST00000539049 YTHDC1Q96MU7 727 aaKnown RBP16.53■□□□□ 0.24
DDX11-213ENST00000539049 TRIM41Q8WV44 630 aa16.42■□□□□ 0.22
DDX11-213ENST00000539049 TSHZ2Q9NRE2 1034 aa16.38■□□□□ 0.21
DDX11-213ENST00000539049 ABCC9O60706 1549 aa16.37■□□□□ 0.21
DDX11-213ENST00000539049 RANGAP1P46060 587 aaPredicted RBP16.28■□□□□ 0.2
DDX11-213ENST00000539049 CCER1Q8TC90 406 aaPredicted RBP16.27■□□□□ 0.19
DDX11-213ENST00000539049 ANO8Q9HCE9 1232 aaPredicted RBP16.26■□□□□ 0.19
DDX11-213ENST00000539049 SUPT16HQ9Y5B9 1047 aaKnown RBP16.22■□□□□ 0.19
DDX11-213ENST00000539049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.22■□□□□ 0.19
DDX11-213ENST00000539049 CLSPNQ9HAW4 1339 aa16.2■□□□□ 0.18
DDX11-213ENST00000539049 ZNF316A6NFI3 1004 aaPredicted RBP16.09■□□□□ 0.17
DDX11-213ENST00000539049 MIER1Q8N108 512 aa16.09■□□□□ 0.17
DDX11-213ENST00000539049 SLC24A1O60721 1099 aa16.07■□□□□ 0.16
DDX11-213ENST00000539049 RSF1Q96T23 1441 aaPredicted RBP16.07■□□□□ 0.16
DDX11-213ENST00000539049 UBE2Q2Q8WVN8 375 aa16.04■□□□□ 0.16
DDX11-213ENST00000539049 SCRIBQ14160 1630 aa16.02■□□□□ 0.16
DDX11-213ENST00000539049 EIF5BO60841 1220 aaKnown RBP16■□□□□ 0.15
DDX11-213ENST00000539049 SALL2Q9Y467 1007 aaPredicted RBP15.98■□□□□ 0.15
DDX11-213ENST00000539049 RB1CC1Q8TDY2 1594 aa15.95■□□□□ 0.14
DDX11-213ENST00000539049 CCDC136Q96JN2 1154 aa15.95■□□□□ 0.14
DDX11-213ENST00000539049 RBM19Q9Y4C8 960 aaKnown RBP15.93■□□□□ 0.14
DDX11-213ENST00000539049 MYT1LQ9UL68 1186 aa15.93■□□□□ 0.14
DDX11-213ENST00000539049 UBTFP17480 764 aaKnown RBP15.89■□□□□ 0.13
DDX11-213ENST00000539049 DEKP35659 375 aaKnown RBP15.89■□□□□ 0.13
DDX11-213ENST00000539049 ERICH6BQ5W0A0 696 aa15.85■□□□□ 0.13
DDX11-213ENST00000539049 BCANQ96GW7 911 aa15.85■□□□□ 0.13
DDX11-213ENST00000539049 MSH5O43196 834 aa15.82■□□□□ 0.12
DDX11-213ENST00000539049 HNRNPUL2Q1KMD3 747 aaKnown RBP15.82■□□□□ 0.12
DDX11-213ENST00000539049 NACADO15069 1562 aa15.81■□□□□ 0.12
DDX11-213ENST00000539049 CECR2Q9BXF3 1484 aa15.74■□□□□ 0.11
DDX11-213ENST00000539049 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.74■□□□□ 0.11
DDX11-213ENST00000539049 PKNOX2Q96KN3 472 aa15.72■□□□□ 0.11
DDX11-213ENST00000539049 DAXXQ9UER7 740 aaPredicted RBP15.71■□□□□ 0.11
DDX11-213ENST00000539049 MROH2BQ7Z745 1585 aa15.69■□□□□ 0.1
DDX11-213ENST00000539049 FKBP8Q14318 412 aa15.66■□□□□ 0.1
DDX11-213ENST00000539049 PLEKHG5O94827 1062 aa15.64■□□□□ 0.09
DDX11-213ENST00000539049 FANCIQ9NVI1 1328 aa15.64■□□□□ 0.09
DDX11-213ENST00000539049 PABPN1Q86U42 306 aaKnown RBP eCLIP15.64■□□□□ 0.09
DDX11-213ENST00000539049 ITGAEP38570 1179 aa15.62■□□□□ 0.09
DDX11-213ENST00000539049 WIZO95785 1651 aa15.61■□□□□ 0.09
DDX11-213ENST00000539049 RTN4Q9NQC3 1192 aaKnown RBP15.6■□□□□ 0.09
DDX11-213ENST00000539049 NEFLP07196 543 aa15.58■□□□□ 0.09
DDX11-213ENST00000539049 PODXL2Q9NZ53 605 aa15.56■□□□□ 0.08
DDX11-213ENST00000539049 IL27Q8NEV9 243 aa15.55■□□□□ 0.08
DDX11-213ENST00000539049 NBR1Q14596 966 aa15.51■□□□□ 0.07
DDX11-213ENST00000539049 BAZ1AQ9NRL2 1556 aaPredicted RBP15.49■□□□□ 0.07
DDX11-213ENST00000539049 ATP1B4Q9UN42 357 aaPredicted RBP15.47■□□□□ 0.07
DDX11-213ENST00000539049 EIF4G1Q04637 1599 aaKnown RBP15.45■□□□□ 0.06
DDX11-213ENST00000539049 CDK11AQ9UQ88 783 aaPredicted RBP15.43■□□□□ 0.06
DDX11-213ENST00000539049 ABCC8Q09428 1581 aa15.42■□□□□ 0.06
DDX11-213ENST00000539049 RTL5Q5HYW3 569 aaPredicted RBP15.42■□□□□ 0.06
DDX11-213ENST00000539049 CCDC88BA6NC98 1476 aa15.41■□□□□ 0.06
DDX11-213ENST00000539049 CEP162Q5TB80 1403 aa15.39■□□□□ 0.05
DDX11-213ENST00000539049 WRNQ14191 1432 aaPredicted RBP eCLIP15.38■□□□□ 0.05
DDX11-213ENST00000539049 SOGA1O94964 1423 aa15.35■□□□□ 0.05
DDX11-213ENST00000539049 NOP58Q9Y2X3 529 aaKnown RBP15.34■□□□□ 0.05
DDX11-213ENST00000539049 TOP2AP11388 1531 aaKnown RBP15.33■□□□□ 0.04
DDX11-213ENST00000539049 GLIPR1L2Q4G1C9 344 aa15.31■□□□□ 0.04
DDX11-213ENST00000539049 TNIKQ9UKE5 1360 aa15.31■□□□□ 0.04
DDX11-213ENST00000539049 KCNH8Q96L42 1107 aa15.27■□□□□ 0.03
DDX11-213ENST00000539049 SMARCA2P51531 1590 aa15.27■□□□□ 0.03
DDX11-213ENST00000539049 CNGB1Q14028 1251 aaPredicted RBP15.25■□□□□ 0.03
DDX11-213ENST00000539049 RUSC2Q8N2Y8 1516 aa15.25■□□□□ 0.03
DDX11-213ENST00000539049 SMARCA4P51532 1647 aa15.25■□□□□ 0.03
DDX11-213ENST00000539049 PAK3O75914 559 aaPredicted RBP15.22■□□□□ 0.03
DDX11-213ENST00000539049 TIMELESSQ9UNS1 1208 aa15.22■□□□□ 0.03
DDX11-213ENST00000539049 EEA1Q15075 1411 aa15.22■□□□□ 0.03
DDX11-213ENST00000539049 ZMYND15Q9H091 742 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms