RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 JPH4Q96JJ6 628 aa14.37□□□□□ -0.11
SPARC-208ENST00000538026 PRG4Q92954 1404 aaPredicted RBP14.33□□□□□ -0.11
SPARC-208ENST00000538026 KIAA0586Q9BVV6 1533 aa14.33□□□□□ -0.12
SPARC-208ENST00000538026 CHIC1Q5VXU3 224 aa14.3□□□□□ -0.12
SPARC-208ENST00000538026 RAPGEF2Q9Y4G8 1499 aa14.29□□□□□ -0.12
SPARC-208ENST00000538026 PRXQ9BXM0 1461 aa14.28□□□□□ -0.12
SPARC-208ENST00000538026 IQGAP2Q13576 1575 aa14.22□□□□□ -0.13
SPARC-208ENST00000538026 CSRNP3Q8WYN3 585 aa14.22□□□□□ -0.13
SPARC-208ENST00000538026 DISP1Q96F81 1524 aa14.2□□□□□ -0.14
SPARC-208ENST00000538026 UGGT2Q9NYU1 1516 aa14.18□□□□□ -0.14
SPARC-208ENST00000538026 FAM9AQ8IZU1 332 aaPredicted RBP14.17□□□□□ -0.14
SPARC-208ENST00000538026 ADCY10Q96PN6 1610 aa14.15□□□□□ -0.14
SPARC-208ENST00000538026 CTTNBP2Q8WZ74 1663 aa14.15□□□□□ -0.14
SPARC-208ENST00000538026 PTPRGP23470 1445 aa14.14□□□□□ -0.15
SPARC-208ENST00000538026 EEA1Q15075 1411 aa14.14□□□□□ -0.15
SPARC-208ENST00000538026 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
SPARC-208ENST00000538026 TNIKQ9UKE5 1360 aa14.12□□□□□ -0.15
SPARC-208ENST00000538026 CARMIL2Q6F5E8 1435 aa14.11□□□□□ -0.15
SPARC-208ENST00000538026 TTBK1Q5TCY1 1321 aaPredicted RBP14.11□□□□□ -0.15
SPARC-208ENST00000538026 KIAA0556O60303 1618 aa14.1□□□□□ -0.15
SPARC-208ENST00000538026 KIF13AQ9H1H9 1805 aa14.06□□□□□ -0.16
SPARC-208ENST00000538026 KIF21BO75037 1637 aa14.05□□□□□ -0.16
SPARC-208ENST00000538026 UACAQ9BZF9 1416 aa14.04□□□□□ -0.16
SPARC-208ENST00000538026 UHRF1BP1LA0JNW5 1464 aa14.04□□□□□ -0.16
SPARC-208ENST00000538026 MAPKBP1O60336 1514 aa14.03□□□□□ -0.16
SPARC-208ENST00000538026 ABCC2Q92887 1545 aa14.02□□□□□ -0.16
SPARC-208ENST00000538026 P3H3Q8IVL6 736 aa14.02□□□□□ -0.17
SPARC-208ENST00000538026 SAMD9Q5K651 1589 aa14.01□□□□□ -0.17
SPARC-208ENST00000538026 PLB1Q6P1J6 1458 aa14.01□□□□□ -0.17
SPARC-208ENST00000538026 GOLGA3Q08378 1498 aa14□□□□□ -0.17
SPARC-208ENST00000538026 EHMT2Q96KQ7 1210 aa14□□□□□ -0.17
SPARC-208ENST00000538026 ABCC10Q5T3U5 1492 aa13.99□□□□□ -0.17
SPARC-208ENST00000538026 NPM1P06748 294 aaKnown RBP eCLIP13.99□□□□□ -0.17
SPARC-208ENST00000538026 ABCA8O94911 1581 aa13.99□□□□□ -0.17
SPARC-208ENST00000538026 KDM5BQ9UGL1 1544 aa13.99□□□□□ -0.17
SPARC-208ENST00000538026 DIP2BQ9P265 1576 aa13.97□□□□□ -0.17
SPARC-208ENST00000538026 RANGAP1P46060 587 aaPredicted RBP13.96□□□□□ -0.17
SPARC-208ENST00000538026 FAM69CQ0P6D2 419 aa13.96□□□□□ -0.17
SPARC-208ENST00000538026 ZCCHC11Q5TAX3 1644 aaKnown RBP13.95□□□□□ -0.18
SPARC-208ENST00000538026 ASXL2Q76L83 1435 aa13.95□□□□□ -0.18
SPARC-208ENST00000538026 FHOD3Q2V2M9 1422 aa13.93□□□□□ -0.18
SPARC-208ENST00000538026 UBTFP17480 764 aaKnown RBP13.91□□□□□ -0.18
SPARC-208ENST00000538026 ATP10BO94823 1461 aa13.89□□□□□ -0.19
SPARC-208ENST00000538026 TSPOAP1O95153 1857 aa13.89□□□□□ -0.19
SPARC-208ENST00000538026 EPRSP07814 1512 aaKnown RBP13.88□□□□□ -0.19
SPARC-208ENST00000538026 GLI2P10070 1586 aa13.88□□□□□ -0.19
SPARC-208ENST00000538026 ARHGAP35Q9NRY4 1499 aa13.87□□□□□ -0.19
SPARC-208ENST00000538026 ARID3CA6NKF2 412 aa13.87□□□□□ -0.19
SPARC-208ENST00000538026 PPRC1Q5VV67 1664 aaKnown RBP13.87□□□□□ -0.19
SPARC-208ENST00000538026 EFCAB5A4FU69 1503 aa13.86□□□□□ -0.19
SPARC-208ENST00000538026 NUP153P49790 1475 aaKnown RBP13.86□□□□□ -0.19
SPARC-208ENST00000538026 RAPGEF6Q8TEU7 1601 aa13.86□□□□□ -0.19
SPARC-208ENST00000538026 WDR7Q9Y4E6 1490 aa13.84□□□□□ -0.19
SPARC-208ENST00000538026 MAP3K4Q9Y6R4 1608 aa13.82□□□□□ -0.2
SPARC-208ENST00000538026 KCNH8Q96L42 1107 aa13.8□□□□□ -0.2
SPARC-208ENST00000538026 COL17A1Q9UMD9 1497 aaPredicted RBP13.79□□□□□ -0.2
SPARC-208ENST00000538026 LOC105371045A0A1W2PR82 267 aa13.75□□□□□ -0.21
SPARC-208ENST00000538026 LRRIQ1Q96JM4 1722 aa13.75□□□□□ -0.21
SPARC-208ENST00000538026 CDK13Q14004 1512 aaKnown RBP13.74□□□□□ -0.21
SPARC-208ENST00000538026 CD109Q6YHK3 1445 aa13.73□□□□□ -0.21
SPARC-208ENST00000538026 FMN1Q68DA7 1419 aa13.73□□□□□ -0.21
SPARC-208ENST00000538026 CFAP43Q8NDM7 1665 aa13.72□□□□□ -0.21
SPARC-208ENST00000538026 MAGI3Q5TCQ9 1506 aa13.72□□□□□ -0.21
SPARC-208ENST00000538026 KDM6BO15054 1643 aa13.72□□□□□ -0.21
SPARC-208ENST00000538026 CLIP1P30622 1438 aa13.71□□□□□ -0.22
SPARC-208ENST00000538026 ABCA9Q8IUA7 1624 aa13.71□□□□□ -0.22
SPARC-208ENST00000538026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.7□□□□□ -0.22
SPARC-208ENST00000538026 HNRNPUL2Q1KMD3 747 aaKnown RBP13.7□□□□□ -0.22
SPARC-208ENST00000538026 PLEKHD1A6NEE1 506 aa13.68□□□□□ -0.22
SPARC-208ENST00000538026 CASKIN1Q8WXD9 1431 aa13.67□□□□□ -0.22
SPARC-208ENST00000538026 ATP1B4Q9UN42 357 aaPredicted RBP13.67□□□□□ -0.22
SPARC-208ENST00000538026 HECW1Q76N89 1606 aa13.67□□□□□ -0.22
SPARC-208ENST00000538026 PCF11O94913 1555 aaKnown RBP13.66□□□□□ -0.22
SPARC-208ENST00000538026 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.66□□□□□ -0.22
SPARC-208ENST00000538026 TEX14Q8IWB6 1497 aa13.66□□□□□ -0.22
SPARC-208ENST00000538026 CEP162Q5TB80 1403 aa13.64□□□□□ -0.23
SPARC-208ENST00000538026 TTC37Q6PGP7 1564 aa13.64□□□□□ -0.23
SPARC-208ENST00000538026 KIF14Q15058 1648 aa13.62□□□□□ -0.23
SPARC-208ENST00000538026 ARAP3Q8WWN8 1544 aa13.61□□□□□ -0.23
SPARC-208ENST00000538026 FYCO1Q9BQS8 1478 aa13.6□□□□□ -0.23
SPARC-208ENST00000538026 TROQ12816 1431 aaPredicted RBP13.59□□□□□ -0.23
SPARC-208ENST00000538026 KDM4FA0A1W2PPD8 638 aa13.58□□□□□ -0.24
SPARC-208ENST00000538026 NEO1Q92859 1461 aa13.58□□□□□ -0.24
SPARC-208ENST00000538026 RAPGEF3O95398 923 aa13.57□□□□□ -0.24
SPARC-208ENST00000538026 FRMPD1Q5SYB0 1578 aa13.56□□□□□ -0.24
SPARC-208ENST00000538026 PLCH2O75038 1416 aa13.56□□□□□ -0.24
SPARC-208ENST00000538026 CCDC18Q5T9S5 1454 aa13.55□□□□□ -0.24
SPARC-208ENST00000538026 CDK11AQ9UQ88 783 aaPredicted RBP13.55□□□□□ -0.24
SPARC-208ENST00000538026 PHLDB1Q86UU1 1377 aa13.55□□□□□ -0.24
SPARC-208ENST00000538026 AKNAQ7Z591 1439 aa13.55□□□□□ -0.24
SPARC-208ENST00000538026 FANCAO15360 1455 aa13.54□□□□□ -0.24
SPARC-208ENST00000538026 RICTORQ6R327 1708 aa13.52□□□□□ -0.25
SPARC-208ENST00000538026 CDC42BPBQ9Y5S2 1711 aa13.52□□□□□ -0.25
SPARC-208ENST00000538026 MYO5CQ9NQX4 1742 aa13.51□□□□□ -0.25
SPARC-208ENST00000538026 CDC42BPAQ5VT25 1732 aa13.49□□□□□ -0.25
SPARC-208ENST00000538026 DENND4BO75064 1496 aaPredicted RBP13.48□□□□□ -0.25
SPARC-208ENST00000538026 VPS8Q8N3P4 1428 aa13.47□□□□□ -0.25
SPARC-208ENST00000538026 EFCAB2Q5VUJ9 269 aa13.47□□□□□ -0.25
SPARC-208ENST00000538026 GPATCH8Q9UKJ3 1502 aaKnown RBP13.47□□□□□ -0.25
SPARC-208ENST00000538026 SCAPERQ9BY12 1400 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms