RNA–Protein interactions for RNA: ENST00000537880.1

TCHP-205, Transcript of trichoplein keratin filament binding, humanhuman

TSL 1 (best)

Gene TCHP, Length 2,817 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-205ENST00000537880 TNIKQ9UKE5 1360 aa17.19■□□□□ 0.34
TCHP-205ENST00000537880 NEUROD1Q13562 356 aa17.16■□□□□ 0.34
TCHP-205ENST00000537880 CHD1O14646 1710 aa17.15■□□□□ 0.34
TCHP-205ENST00000537880 SYNJ2O15056 1496 aa17.13■□□□□ 0.33
TCHP-205ENST00000537880 GTF3C3Q9Y5Q9 886 aa17.12■□□□□ 0.33
TCHP-205ENST00000537880 TRIM26Q12899 539 aaPredicted RBP17.11■□□□□ 0.33
TCHP-205ENST00000537880 GRIN2AQ12879 1464 aa17.1■□□□□ 0.33
TCHP-205ENST00000537880 ZEB1P37275 1124 aaPredicted RBP17.08■□□□□ 0.33
TCHP-205ENST00000537880 CEP170Q5SW79 1584 aa17.07■□□□□ 0.32
TCHP-205ENST00000537880 CEP162Q5TB80 1403 aa17.05■□□□□ 0.32
TCHP-205ENST00000537880 SAMD9Q5K651 1589 aa17.04■□□□□ 0.32
TCHP-205ENST00000537880 NUP160Q12769 1436 aa17.03■□□□□ 0.32
TCHP-205ENST00000537880 IQGAP2Q13576 1575 aa17.02■□□□□ 0.32
TCHP-205ENST00000537880 EFCAB5A4FU69 1503 aa17■□□□□ 0.31
TCHP-205ENST00000537880 UGGT2Q9NYU1 1516 aa16.97■□□□□ 0.31
TCHP-205ENST00000537880 SHROOM2Q13796 1616 aa16.97■□□□□ 0.31
TCHP-205ENST00000537880 KIAA0586Q9BVV6 1533 aa16.97■□□□□ 0.31
TCHP-205ENST00000537880 TTBK1Q5TCY1 1321 aaPredicted RBP16.96■□□□□ 0.31
TCHP-205ENST00000537880 UBTFP17480 764 aaKnown RBP16.96■□□□□ 0.3
TCHP-205ENST00000537880 ARHGAP35Q9NRY4 1499 aa16.95■□□□□ 0.3
TCHP-205ENST00000537880 CLIP1P30622 1438 aa16.95■□□□□ 0.3
TCHP-205ENST00000537880 ARAP1Q96P48 1450 aa16.94■□□□□ 0.3
TCHP-205ENST00000537880 CLASP1Q7Z460 1538 aa16.94■□□□□ 0.3
TCHP-205ENST00000537880 KIAA0556O60303 1618 aa16.89■□□□□ 0.29
TCHP-205ENST00000537880 BCL11AQ9H165 835 aa16.88■□□□□ 0.29
TCHP-205ENST00000537880 DISP1Q96F81 1524 aa16.85■□□□□ 0.29
TCHP-205ENST00000537880 CHMP7Q8WUX9 453 aaPredicted RBP16.85■□□□□ 0.29
TCHP-205ENST00000537880 CENPBP07199 599 aaPredicted RBP16.84■□□□□ 0.29
TCHP-205ENST00000537880 VPS8Q8N3P4 1428 aa16.83■□□□□ 0.28
TCHP-205ENST00000537880 LRRIQ1Q96JM4 1722 aa16.81■□□□□ 0.28
TCHP-205ENST00000537880 PCF11O94913 1555 aaKnown RBP16.78■□□□□ 0.28
TCHP-205ENST00000537880 CFAP43Q8NDM7 1665 aa16.78■□□□□ 0.28
TCHP-205ENST00000537880 FHOD3Q2V2M9 1422 aa16.75■□□□□ 0.27
TCHP-205ENST00000537880 FYCO1Q9BQS8 1478 aa16.72■□□□□ 0.27
TCHP-205ENST00000537880 MAP3K1Q13233 1512 aa16.72■□□□□ 0.27
TCHP-205ENST00000537880 FBLN2P98095 1184 aa16.72■□□□□ 0.27
TCHP-205ENST00000537880 FMN1Q68DA7 1419 aa16.7■□□□□ 0.26
TCHP-205ENST00000537880 ERCC6L2Q5T890 1561 aa16.7■□□□□ 0.26
TCHP-205ENST00000537880 CASKIN1Q8WXD9 1431 aa16.69■□□□□ 0.26
TCHP-205ENST00000537880 RAPGEF6Q8TEU7 1601 aa16.69■□□□□ 0.26
TCHP-205ENST00000537880 HECW1Q76N89 1606 aa16.68■□□□□ 0.26
TCHP-205ENST00000537880 ABCA8O94911 1581 aa16.67■□□□□ 0.26
TCHP-205ENST00000537880 TIAM1Q13009 1591 aa16.67■□□□□ 0.26
TCHP-205ENST00000537880 CARMIL2Q6F5E8 1435 aa16.67■□□□□ 0.26
TCHP-205ENST00000537880 JPH4Q96JJ6 628 aa16.66■□□□□ 0.26
TCHP-205ENST00000537880 PRG4Q92954 1404 aaPredicted RBP16.66■□□□□ 0.26
TCHP-205ENST00000537880 RANGAP1P46060 587 aaPredicted RBP16.62■□□□□ 0.25
TCHP-205ENST00000537880 PRKCSHP14314 528 aaPredicted RBP16.62■□□□□ 0.25
TCHP-205ENST00000537880 DIEXFQ68CQ4 756 aaKnown RBP16.62■□□□□ 0.25
TCHP-205ENST00000537880 CCDC18Q5T9S5 1454 aa16.58■□□□□ 0.24
TCHP-205ENST00000537880 NUP153P49790 1475 aaKnown RBP16.56■□□□□ 0.24
TCHP-205ENST00000537880 P3H3Q8IVL6 736 aa16.56■□□□□ 0.24
TCHP-205ENST00000537880 OSCARQ8IYS5 282 aa16.56■□□□□ 0.24
TCHP-205ENST00000537880 EPRSP07814 1512 aaKnown RBP16.54■□□□□ 0.24
TCHP-205ENST00000537880 PLB1Q6P1J6 1458 aa16.53■□□□□ 0.24
TCHP-205ENST00000537880 UHRF1BP1LA0JNW5 1464 aa16.53■□□□□ 0.24
TCHP-205ENST00000537880 ABCC2Q92887 1545 aa16.52■□□□□ 0.24
TCHP-205ENST00000537880 ADCY10Q96PN6 1610 aa16.52■□□□□ 0.24
TCHP-205ENST00000537880 LRRC9Q6ZRR7 1453 aa16.51■□□□□ 0.23
TCHP-205ENST00000537880 MAGI3Q5TCQ9 1506 aa16.51■□□□□ 0.23
TCHP-205ENST00000537880 EHBP1L1Q8N3D4 1523 aa16.5■□□□□ 0.23
TCHP-205ENST00000537880 ANP32EQ9BTT0 268 aa16.5■□□□□ 0.23
TCHP-205ENST00000537880 RIMBP3CA6NJZ7 1639 aa16.49■□□□□ 0.23
TCHP-205ENST00000537880 RIMBP3BA6NNM3 1639 aa16.49■□□□□ 0.23
TCHP-205ENST00000537880 RIMBP3Q9UFD9 1639 aa16.49■□□□□ 0.23
TCHP-205ENST00000537880 CDK13Q14004 1512 aaKnown RBP16.49■□□□□ 0.23
TCHP-205ENST00000537880 PTPRGP23470 1445 aa16.49■□□□□ 0.23
TCHP-205ENST00000537880 ARHGEF11O15085 1522 aa16.48■□□□□ 0.23
TCHP-205ENST00000537880 YTHDC1Q96MU7 727 aaKnown RBP16.48■□□□□ 0.23
TCHP-205ENST00000537880 ZCCHC11Q5TAX3 1644 aaKnown RBP16.47■□□□□ 0.23
TCHP-205ENST00000537880 SUPT6HQ7KZ85 1726 aaKnown RBP16.47■□□□□ 0.23
TCHP-205ENST00000537880 UACAQ9BZF9 1416 aa16.47■□□□□ 0.23
TCHP-205ENST00000537880 KDM5BQ9UGL1 1544 aa16.43■□□□□ 0.22
TCHP-205ENST00000537880 ATP10BO94823 1461 aa16.42■□□□□ 0.22
TCHP-205ENST00000537880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.41■□□□□ 0.22
TCHP-205ENST00000537880 KANK4Q5T7N3 995 aaPredicted RBP16.4■□□□□ 0.22
TCHP-205ENST00000537880 KIF14Q15058 1648 aa16.37■□□□□ 0.21
TCHP-205ENST00000537880 APLP2Q06481 763 aa16.35■□□□□ 0.21
TCHP-205ENST00000537880 CCER1Q8TC90 406 aaPredicted RBP16.35■□□□□ 0.21
TCHP-205ENST00000537880 ITSN2Q9NZM3 1697 aa16.35■□□□□ 0.21
TCHP-205ENST00000537880 CDC42BPAQ5VT25 1732 aa16.35■□□□□ 0.21
TCHP-205ENST00000537880 TROQ12816 1431 aaPredicted RBP16.34■□□□□ 0.21
TCHP-205ENST00000537880 NCOA2Q15596 1464 aa16.33■□□□□ 0.2
TCHP-205ENST00000537880 RRBP1Q9P2E9 1410 aaKnown RBP16.33■□□□□ 0.2
TCHP-205ENST00000537880 ABCC10Q5T3U5 1492 aa16.3■□□□□ 0.2
TCHP-205ENST00000537880 MTUS2Q5JR59 1369 aa16.3■□□□□ 0.2
TCHP-205ENST00000537880 PHLDB1Q86UU1 1377 aa16.28■□□□□ 0.2
TCHP-205ENST00000537880 PREX2Q70Z35 1606 aa16.28■□□□□ 0.2
TCHP-205ENST00000537880 CDC42BPBQ9Y5S2 1711 aa16.27■□□□□ 0.2
TCHP-205ENST00000537880 MYO5CQ9NQX4 1742 aa16.27■□□□□ 0.19
TCHP-205ENST00000537880 TTC37Q6PGP7 1564 aa16.26■□□□□ 0.19
TCHP-205ENST00000537880 ATP1B4Q9UN42 357 aaPredicted RBP16.26■□□□□ 0.19
TCHP-205ENST00000537880 MAPKBP1O60336 1514 aa16.26■□□□□ 0.19
TCHP-205ENST00000537880 TCOF1Q13428 1488 aaKnown RBP16.25■□□□□ 0.19
TCHP-205ENST00000537880 PTPN23Q9H3S7 1636 aa16.25■□□□□ 0.19
TCHP-205ENST00000537880 MYOM3Q5VTT5 1437 aa16.25■□□□□ 0.19
TCHP-205ENST00000537880 ABCA9Q8IUA7 1624 aa16.25■□□□□ 0.19
TCHP-205ENST00000537880 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.24■□□□□ 0.19
TCHP-205ENST00000537880 TSHZ2Q9NRE2 1034 aa16.23■□□□□ 0.19
TCHP-205ENST00000537880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms