RNA–Protein interactions for RNA: ENST00000537880.1

TCHP-205, Transcript of trichoplein keratin filament binding, humanhuman

TSL 1 (best)

Gene TCHP, Length 2,817 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-205ENST00000537880 NISCHQ9Y2I1 1504 aa24.81■■□□□ 1.56
TCHP-205ENST00000537880 CCDC180Q9P1Z9 1646 aa21.97■■□□□ 1.11
TCHP-205ENST00000537880 ZCCHC6Q5VYS8 1495 aaKnown RBP20.84■□□□□ 0.93
TCHP-205ENST00000537880 DCAF1Q9Y4B6 1507 aa20.66■□□□□ 0.9
TCHP-205ENST00000537880 ABCC9O60706 1549 aa20.58■□□□□ 0.89
TCHP-205ENST00000537880 MYO15BQ96JP2 1530 aa20.52■□□□□ 0.88
TCHP-205ENST00000537880 NACADO15069 1562 aa20.37■□□□□ 0.85
TCHP-205ENST00000537880 RB1CC1Q8TDY2 1594 aa20.22■□□□□ 0.83
TCHP-205ENST00000537880 DCAF8L2P0C7V8 631 aa20.02■□□□□ 0.8
TCHP-205ENST00000537880 UNC13AQ9UPW8 1703 aa20.01■□□□□ 0.79
TCHP-205ENST00000537880 SCRIBQ14160 1630 aa19.91■□□□□ 0.78
TCHP-205ENST00000537880 SHROOM4Q9ULL8 1493 aa19.7■□□□□ 0.74
TCHP-205ENST00000537880 BICRAQ9NZM4 1560 aa19.68■□□□□ 0.74
TCHP-205ENST00000537880 PABPN1Q86U42 306 aaKnown RBP eCLIP19.2■□□□□ 0.66
TCHP-205ENST00000537880 CECR2Q9BXF3 1484 aa19.2■□□□□ 0.66
TCHP-205ENST00000537880 BAZ1AQ9NRL2 1556 aaPredicted RBP19.19■□□□□ 0.66
TCHP-205ENST00000537880 SMARCA4P51532 1647 aa19.18■□□□□ 0.66
TCHP-205ENST00000537880 MROH2BQ7Z745 1585 aa19.12■□□□□ 0.65
TCHP-205ENST00000537880 RSF1Q96T23 1441 aaPredicted RBP19.07■□□□□ 0.64
TCHP-205ENST00000537880 PEG3Q9GZU2 1588 aa19.05■□□□□ 0.64
TCHP-205ENST00000537880 EIF4G1Q04637 1599 aaKnown RBP19.03■□□□□ 0.64
TCHP-205ENST00000537880 WIZO95785 1651 aa19■□□□□ 0.63
TCHP-205ENST00000537880 SMARCA2P51531 1590 aa18.86■□□□□ 0.61
TCHP-205ENST00000537880 TOP2AP11388 1531 aaKnown RBP18.83■□□□□ 0.6
TCHP-205ENST00000537880 ATAD2BQ9ULI0 1458 aa18.82■□□□□ 0.6
TCHP-205ENST00000537880 CC2D2AQ9P2K1 1620 aa18.8■□□□□ 0.6
TCHP-205ENST00000537880 HMGXB3Q12766 1538 aa18.79■□□□□ 0.6
TCHP-205ENST00000537880 SUPT5HO00267 1087 aaKnown RBP18.76■□□□□ 0.59
TCHP-205ENST00000537880 NCAPD3P42695 1498 aa18.73■□□□□ 0.59
TCHP-205ENST00000537880 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
TCHP-205ENST00000537880 PELP1Q8IZL8 1130 aaKnown RBP18.54■□□□□ 0.56
TCHP-205ENST00000537880 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.55
TCHP-205ENST00000537880 HRCP23327 699 aa18.5■□□□□ 0.55
TCHP-205ENST00000537880 PRDM2Q13029 1718 aa18.44■□□□□ 0.54
TCHP-205ENST00000537880 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
TCHP-205ENST00000537880 CFTRP13569 1480 aa18.24■□□□□ 0.51
TCHP-205ENST00000537880 LAMC3Q9Y6N6 1575 aa18.2■□□□□ 0.5
TCHP-205ENST00000537880 PPARGC1BQ86YN6 1023 aaKnown RBP18.19■□□□□ 0.5
TCHP-205ENST00000537880 CADPSQ9ULU8 1353 aa18.13■□□□□ 0.49
TCHP-205ENST00000537880 NESP48681 1621 aa18.05■□□□□ 0.48
TCHP-205ENST00000537880 BIVM-ERCC5R4GMW8 1640 aa18.05■□□□□ 0.48
TCHP-205ENST00000537880 ABCC8Q09428 1581 aa18.04■□□□□ 0.48
TCHP-205ENST00000537880 KIF21AQ7Z4S6 1674 aa18.04■□□□□ 0.48
TCHP-205ENST00000537880 CHIC1Q5VXU3 224 aa18■□□□□ 0.47
TCHP-205ENST00000537880 SYNJ1O43426 1573 aa17.99■□□□□ 0.47
TCHP-205ENST00000537880 TOP2BQ02880 1626 aa17.98■□□□□ 0.47
TCHP-205ENST00000537880 FANCD2Q9BXW9 1451 aa17.96■□□□□ 0.47
TCHP-205ENST00000537880 MYT1Q01538 1121 aa17.94■□□□□ 0.46
TCHP-205ENST00000537880 CUX1P39880 1505 aa17.92■□□□□ 0.46
TCHP-205ENST00000537880 WRNQ14191 1432 aaPredicted RBP eCLIP17.91■□□□□ 0.46
TCHP-205ENST00000537880 PCGF6Q9BYE7 350 aa17.9■□□□□ 0.46
TCHP-205ENST00000537880 PDS5BQ9NTI5 1447 aa17.89■□□□□ 0.45
TCHP-205ENST00000537880 CEP164Q9UPV0 1460 aa17.88■□□□□ 0.45
TCHP-205ENST00000537880 DNMBPQ6XZF7 1577 aa17.88■□□□□ 0.45
TCHP-205ENST00000537880 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
TCHP-205ENST00000537880 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.44
TCHP-205ENST00000537880 URB2Q14146 1524 aaKnown RBP17.81■□□□□ 0.44
TCHP-205ENST00000537880 TOPBP1Q92547 1522 aa17.79■□□□□ 0.44
TCHP-205ENST00000537880 WDR97A6NE52 1622 aa17.78■□□□□ 0.44
TCHP-205ENST00000537880 WDR62O43379 1518 aa17.77■□□□□ 0.44
TCHP-205ENST00000537880 MRC2Q9UBG0 1479 aa17.76■□□□□ 0.43
TCHP-205ENST00000537880 TRIM41Q8WV44 630 aa17.73■□□□□ 0.43
TCHP-205ENST00000537880 FGD5Q6ZNL6 1462 aa17.7■□□□□ 0.42
TCHP-205ENST00000537880 POLA1P09884 1462 aaPredicted RBP17.67■□□□□ 0.42
TCHP-205ENST00000537880 TARBP1Q13395 1621 aaKnown RBP17.66■□□□□ 0.42
TCHP-205ENST00000537880 ERCC6Q03468 1493 aa17.64■□□□□ 0.41
TCHP-205ENST00000537880 ABCA10Q8WWZ4 1543 aa17.61■□□□□ 0.41
TCHP-205ENST00000537880 EEA1Q15075 1411 aa17.61■□□□□ 0.41
TCHP-205ENST00000537880 ABCA5Q8WWZ7 1642 aa17.59■□□□□ 0.41
TCHP-205ENST00000537880 SOGA1O94964 1423 aa17.58■□□□□ 0.4
TCHP-205ENST00000537880 CUX2O14529 1486 aa17.58■□□□□ 0.4
TCHP-205ENST00000537880 RUSC2Q8N2Y8 1516 aa17.56■□□□□ 0.4
TCHP-205ENST00000537880 RAD54L2Q9Y4B4 1467 aa17.52■□□□□ 0.4
TCHP-205ENST00000537880 PBRM1Q86U86 1689 aa17.51■□□□□ 0.39
TCHP-205ENST00000537880 KIF21BO75037 1637 aa17.51■□□□□ 0.39
TCHP-205ENST00000537880 IFT140Q96RY7 1462 aa17.5■□□□□ 0.39
TCHP-205ENST00000537880 KIF27Q86VH2 1401 aa17.47■□□□□ 0.39
TCHP-205ENST00000537880 CUL7Q14999 1698 aa17.45■□□□□ 0.38
TCHP-205ENST00000537880 EIF4G3O43432 1585 aaKnown RBP17.43■□□□□ 0.38
TCHP-205ENST00000537880 ERICH3Q5RHP9 1530 aa17.43■□□□□ 0.38
TCHP-205ENST00000537880 PRXQ9BXM0 1461 aa17.4■□□□□ 0.38
TCHP-205ENST00000537880 GAPVD1Q14C86 1478 aa17.36■□□□□ 0.37
TCHP-205ENST00000537880 ZNF608Q9ULD9 1512 aaPredicted RBP17.35■□□□□ 0.37
TCHP-205ENST00000537880 CSRNP3Q8WYN3 585 aa17.34■□□□□ 0.37
TCHP-205ENST00000537880 ADAMTS12P58397 1594 aa17.34■□□□□ 0.37
TCHP-205ENST00000537880 IGF1RP08069 1367 aa17.33■□□□□ 0.37
TCHP-205ENST00000537880 EHMT2Q96KQ7 1210 aa17.33■□□□□ 0.36
TCHP-205ENST00000537880 GOLGA3Q08378 1498 aa17.31■□□□□ 0.36
TCHP-205ENST00000537880 GRIN2BQ13224 1484 aa17.29■□□□□ 0.36
TCHP-205ENST00000537880 TDRD9Q8NDG6 1382 aaKnown RBP17.28■□□□□ 0.36
TCHP-205ENST00000537880 LOC105371045A0A1W2PR82 267 aa17.28■□□□□ 0.36
TCHP-205ENST00000537880 FAM9AQ8IZU1 332 aaPredicted RBP17.28■□□□□ 0.36
TCHP-205ENST00000537880 RAPGEF2Q9Y4G8 1499 aa17.28■□□□□ 0.36
TCHP-205ENST00000537880 CTTNBP2Q8WZ74 1663 aa17.27■□□□□ 0.36
TCHP-205ENST00000537880 AQRO60306 1485 aaKnown RBP eCLIP17.27■□□□□ 0.368e-7■■■■■ 28.7
TCHP-205ENST00000537880 MAGI1Q96QZ7 1491 aaPredicted RBP17.22■□□□□ 0.35
TCHP-205ENST00000537880 CARMIL1Q5VZK9 1371 aa17.21■□□□□ 0.35
TCHP-205ENST00000537880 ACIN1Q9UKV3 1341 aaKnown RBP17.19■□□□□ 0.34
TCHP-205ENST00000537880 FHAD1B1AJZ9 1412 aa17.19■□□□□ 0.34
TCHP-205ENST00000537880 SNAPC4Q5SXM2 1469 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms