RNA–Protein interactions for RNA: ENST00000537830.6

SLC12A4-203, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,525 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-203ENST00000537830 GAPVD1Q14C86 1478 aa17.44■□□□□ 0.38
SLC12A4-203ENST00000537830 AQRO60306 1485 aaKnown RBP eCLIP17.43■□□□□ 0.382e-7■■■■■ 35
SLC12A4-203ENST00000537830 ABCA10Q8WWZ4 1543 aa17.43■□□□□ 0.38
SLC12A4-203ENST00000537830 LAMC3Q9Y6N6 1575 aa17.42■□□□□ 0.38
SLC12A4-203ENST00000537830 NEUROD1Q13562 356 aa17.42■□□□□ 0.38
SLC12A4-203ENST00000537830 YTHDC1Q96MU7 727 aaKnown RBP17.42■□□□□ 0.38
SLC12A4-203ENST00000537830 FHAD1B1AJZ9 1412 aa17.39■□□□□ 0.37
SLC12A4-203ENST00000537830 ERCC6Q03468 1493 aa17.39■□□□□ 0.37
SLC12A4-203ENST00000537830 MTUS2Q5JR59 1369 aa17.38■□□□□ 0.37
SLC12A4-203ENST00000537830 PRDM2Q13029 1718 aa17.37■□□□□ 0.37
SLC12A4-203ENST00000537830 CHMP7Q8WUX9 453 aaPredicted RBP17.35■□□□□ 0.37
SLC12A4-203ENST00000537830 PHLDB1Q86UU1 1377 aa17.33■□□□□ 0.36
SLC12A4-203ENST00000537830 CHIC2Q9UKJ5 165 aa17.32■□□□□ 0.36
SLC12A4-203ENST00000537830 DHX57Q6P158 1386 aaKnown RBP17.28■□□□□ 0.36
SLC12A4-203ENST00000537830 LRRC9Q6ZRR7 1453 aa17.27■□□□□ 0.35
SLC12A4-203ENST00000537830 SIN3AQ96ST3 1273 aa17.26■□□□□ 0.35
SLC12A4-203ENST00000537830 KIF21AQ7Z4S6 1674 aa17.26■□□□□ 0.35
SLC12A4-203ENST00000537830 RAB3GAP2Q9H2M9 1393 aa17.26■□□□□ 0.35
SLC12A4-203ENST00000537830 FMN1Q68DA7 1419 aa17.25■□□□□ 0.35
SLC12A4-203ENST00000537830 RRBP1Q9P2E9 1410 aaKnown RBP17.24■□□□□ 0.35
SLC12A4-203ENST00000537830 MRC2Q9UBG0 1479 aa17.23■□□□□ 0.35
SLC12A4-203ENST00000537830 ZNF608Q9ULD9 1512 aaPredicted RBP17.23■□□□□ 0.35
SLC12A4-203ENST00000537830 RRP7BPQ9NSQ0 103 aa17.22■□□□□ 0.35
SLC12A4-203ENST00000537830 TIAM1Q13009 1591 aa17.21■□□□□ 0.35
SLC12A4-203ENST00000537830 MIER1Q8N108 512 aa17.21■□□□□ 0.35
SLC12A4-203ENST00000537830 TRIM52Q96A61 297 aa17.21■□□□□ 0.35
SLC12A4-203ENST00000537830 PCF11O94913 1555 aaKnown RBP17.19■□□□□ 0.34
SLC12A4-203ENST00000537830 ZNF777Q9ULD5 760 aaPredicted RBP17.18■□□□□ 0.34
SLC12A4-203ENST00000537830 CASKIN1Q8WXD9 1431 aa17.17■□□□□ 0.34
SLC12A4-203ENST00000537830 HIRIP3Q9BW71 556 aaPredicted RBP17.17■□□□□ 0.34
SLC12A4-203ENST00000537830 CENPBP07199 599 aaPredicted RBP17.16■□□□□ 0.34
SLC12A4-203ENST00000537830 SETD5Q9C0A6 1442 aa17.16■□□□□ 0.34
SLC12A4-203ENST00000537830 CUL7Q14999 1698 aa17.15■□□□□ 0.34
SLC12A4-203ENST00000537830 GRIN2BQ13224 1484 aa17.14■□□□□ 0.33
SLC12A4-203ENST00000537830 FYCO1Q9BQS8 1478 aa17.11■□□□□ 0.33
SLC12A4-203ENST00000537830 CLSPNQ9HAW4 1339 aa17.11■□□□□ 0.33
SLC12A4-203ENST00000537830 EFCAB5A4FU69 1503 aa17.1■□□□□ 0.33
SLC12A4-203ENST00000537830 CDK11AQ9UQ88 783 aaPredicted RBP17.08■□□□□ 0.32
SLC12A4-203ENST00000537830 ABCA5Q8WWZ7 1642 aa17.08■□□□□ 0.32
SLC12A4-203ENST00000537830 SNAPC4Q5SXM2 1469 aa17.08■□□□□ 0.32
SLC12A4-203ENST00000537830 IFT140Q96RY7 1462 aa17.08■□□□□ 0.32
SLC12A4-203ENST00000537830 JPH4Q96JJ6 628 aa17.08■□□□□ 0.32
SLC12A4-203ENST00000537830 SCAF1Q9H7N4 1312 aaKnown RBP17.06■□□□□ 0.32
SLC12A4-203ENST00000537830 FGD6Q6ZV73 1430 aa17.05■□□□□ 0.32
SLC12A4-203ENST00000537830 TARBP1Q13395 1621 aaKnown RBP17.05■□□□□ 0.32
SLC12A4-203ENST00000537830 ACIN1Q9UKV3 1341 aaKnown RBP17.05■□□□□ 0.32
SLC12A4-203ENST00000537830 NCOA2Q15596 1464 aa17.02■□□□□ 0.32
SLC12A4-203ENST00000537830 MAP3K1Q13233 1512 aa17.02■□□□□ 0.32
SLC12A4-203ENST00000537830 ZNF644Q9H582 1327 aaPredicted RBP17.02■□□□□ 0.31
SLC12A4-203ENST00000537830 CTTNBP2Q8WZ74 1663 aa17.01■□□□□ 0.31
SLC12A4-203ENST00000537830 FOXD1Q16676 465 aa17■□□□□ 0.31
SLC12A4-203ENST00000537830 DDX10Q13206 875 aaKnown RBP17■□□□□ 0.31
SLC12A4-203ENST00000537830 GTF3C3Q9Y5Q9 886 aa16.99■□□□□ 0.31
SLC12A4-203ENST00000537830 CDK13Q14004 1512 aaKnown RBP16.99■□□□□ 0.31
SLC12A4-203ENST00000537830 CFDP1Q9UEE9 299 aaPredicted RBP16.98■□□□□ 0.31
SLC12A4-203ENST00000537830 IQGAP2Q13576 1575 aa16.98■□□□□ 0.31
SLC12A4-203ENST00000537830 TONSLQ96HA7 1378 aa16.97■□□□□ 0.31
SLC12A4-203ENST00000537830 WDR97A6NE52 1622 aa16.97■□□□□ 0.31
SLC12A4-203ENST00000537830 MYOM3Q5VTT5 1437 aa16.97■□□□□ 0.31
SLC12A4-203ENST00000537830 PLEKHD1A6NEE1 506 aa16.95■□□□□ 0.3
SLC12A4-203ENST00000537830 PTPRKQ15262 1439 aa16.94■□□□□ 0.3
SLC12A4-203ENST00000537830 GRIN2AQ12879 1464 aa16.92■□□□□ 0.3
SLC12A4-203ENST00000537830 KIAA0586Q9BVV6 1533 aa16.92■□□□□ 0.3
SLC12A4-203ENST00000537830 ADAMTS12P58397 1594 aa16.92■□□□□ 0.3
SLC12A4-203ENST00000537830 EPRSP07814 1512 aaKnown RBP16.92■□□□□ 0.3
SLC12A4-203ENST00000537830 WDR62O43379 1518 aa16.91■□□□□ 0.3
SLC12A4-203ENST00000537830 PBRM1Q86U86 1689 aa16.9■□□□□ 0.3
SLC12A4-203ENST00000537830 KCNH8Q96L42 1107 aa16.9■□□□□ 0.3
SLC12A4-203ENST00000537830 CCDC18Q5T9S5 1454 aa16.89■□□□□ 0.29
SLC12A4-203ENST00000537830 CARMIL2Q6F5E8 1435 aa16.88■□□□□ 0.29
SLC12A4-203ENST00000537830 ZNF326Q5BKZ1 582 aaKnown RBP16.88■□□□□ 0.29
SLC12A4-203ENST00000537830 CFAP43Q8NDM7 1665 aa16.88■□□□□ 0.29
SLC12A4-203ENST00000537830 SAMD9Q5K651 1589 aa16.88■□□□□ 0.29
SLC12A4-203ENST00000537830 PPP1R15AO75807 674 aaPredicted RBP16.88■□□□□ 0.29
SLC12A4-203ENST00000537830 SLC4A1APQ9BWU0 796 aaKnown RBP16.87■□□□□ 0.29
SLC12A4-203ENST00000537830 CNGB1Q14028 1251 aaPredicted RBP16.87■□□□□ 0.29
SLC12A4-203ENST00000537830 PLB1Q6P1J6 1458 aa16.87■□□□□ 0.29
SLC12A4-203ENST00000537830 PRG4Q92954 1404 aaPredicted RBP16.87■□□□□ 0.29
SLC12A4-203ENST00000537830 EIF4G3O43432 1585 aaKnown RBP16.86■□□□□ 0.29
SLC12A4-203ENST00000537830 MAGI3Q5TCQ9 1506 aa16.85■□□□□ 0.29
SLC12A4-203ENST00000537830 MPHOSPH9Q99550 1183 aa16.84■□□□□ 0.29
SLC12A4-203ENST00000537830 SYNJ2O15056 1496 aa16.84■□□□□ 0.29
SLC12A4-203ENST00000537830 MAPKBP1O60336 1514 aa16.84■□□□□ 0.29
SLC12A4-203ENST00000537830 EHBP1L1Q8N3D4 1523 aa16.83■□□□□ 0.29
SLC12A4-203ENST00000537830 POLR3GLQ9BT43 218 aa16.83■□□□□ 0.28
SLC12A4-203ENST00000537830 THOC2Q8NI27 1593 aaKnown RBP16.82■□□□□ 0.28
SLC12A4-203ENST00000537830 NAIPQ13075 1403 aa16.82■□□□□ 0.28
SLC12A4-203ENST00000537830 DISP1Q96F81 1524 aa16.81■□□□□ 0.28
SLC12A4-203ENST00000537830 HECW1Q76N89 1606 aa16.81■□□□□ 0.28
SLC12A4-203ENST00000537830 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.81■□□□□ 0.28
SLC12A4-203ENST00000537830 SUPT6HQ7KZ85 1726 aaKnown RBP16.8■□□□□ 0.28
SLC12A4-203ENST00000537830 HFM1A2PYH4 1435 aa16.8■□□□□ 0.28
SLC12A4-203ENST00000537830 MAGI1Q96QZ7 1491 aaPredicted RBP16.8■□□□□ 0.28
SLC12A4-203ENST00000537830 TSPY4P0CV99 314 aa16.79■□□□□ 0.28
SLC12A4-203ENST00000537830 TSPY10P0CW01 314 aa16.79■□□□□ 0.28
SLC12A4-203ENST00000537830 HNRNPMP52272 730 aaKnown RBP eCLIP16.79■□□□□ 0.28
SLC12A4-203ENST00000537830 UGGT2Q9NYU1 1516 aa16.77■□□□□ 0.28
SLC12A4-203ENST00000537830 PTPRGP23470 1445 aa16.77■□□□□ 0.28
SLC12A4-203ENST00000537830 NUP153P49790 1475 aaKnown RBP16.77■□□□□ 0.28
SLC12A4-203ENST00000537830 UACAQ9BZF9 1416 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms