RNA–Protein interactions for RNA: ENST00000537830.6

SLC12A4-203, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,525 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-203ENST00000537830 NISCHQ9Y2I1 1504 aa24.73■■□□□ 1.55
SLC12A4-203ENST00000537830 DCAF8L2P0C7V8 631 aa21.64■■□□□ 1.05
SLC12A4-203ENST00000537830 SHROOM4Q9ULL8 1493 aa21.53■■□□□ 1.04
SLC12A4-203ENST00000537830 SUPT5HO00267 1087 aaKnown RBP21.06■□□□□ 0.96
SLC12A4-203ENST00000537830 CCDC180Q9P1Z9 1646 aa20.84■□□□□ 0.93
SLC12A4-203ENST00000537830 ZCCHC6Q5VYS8 1495 aaKnown RBP20.75■□□□□ 0.91
SLC12A4-203ENST00000537830 ABCC9O60706 1549 aa20.33■□□□□ 0.85
SLC12A4-203ENST00000537830 DCAF1Q9Y4B6 1507 aa20■□□□□ 0.79
SLC12A4-203ENST00000537830 SCRIBQ14160 1630 aa19.96■□□□□ 0.79
SLC12A4-203ENST00000537830 CHIC1Q5VXU3 224 aa19.94■□□□□ 0.78
SLC12A4-203ENST00000537830 EHMT2Q96KQ7 1210 aa19.65■□□□□ 0.74
SLC12A4-203ENST00000537830 PABPN1Q86U42 306 aaKnown RBP eCLIP19.62■□□□□ 0.731e-6■■□□□ 11.6
SLC12A4-203ENST00000537830 FAM9AQ8IZU1 332 aaPredicted RBP19.59■□□□□ 0.73
SLC12A4-203ENST00000537830 NACADO15069 1562 aa19.58■□□□□ 0.73
SLC12A4-203ENST00000537830 LOC105371045A0A1W2PR82 267 aa19.57■□□□□ 0.72
SLC12A4-203ENST00000537830 RSF1Q96T23 1441 aaPredicted RBP19.57■□□□□ 0.72
SLC12A4-203ENST00000537830 MYO15BQ96JP2 1530 aa19.54■□□□□ 0.72
SLC12A4-203ENST00000537830 CECR2Q9BXF3 1484 aa19.5■□□□□ 0.71
SLC12A4-203ENST00000537830 TRIM41Q8WV44 630 aa19.5■□□□□ 0.71
SLC12A4-203ENST00000537830 RB1CC1Q8TDY2 1594 aa19.42■□□□□ 0.7
SLC12A4-203ENST00000537830 MROH2BQ7Z745 1585 aa19.3■□□□□ 0.68
SLC12A4-203ENST00000537830 PCGF6Q9BYE7 350 aa19.26■□□□□ 0.67
SLC12A4-203ENST00000537830 WIZO95785 1651 aa19.12■□□□□ 0.65
SLC12A4-203ENST00000537830 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.64
SLC12A4-203ENST00000537830 PPARGC1BQ86YN6 1023 aaKnown RBP18.96■□□□□ 0.63
SLC12A4-203ENST00000537830 TTBK1Q5TCY1 1321 aaPredicted RBP18.86■□□□□ 0.61
SLC12A4-203ENST00000537830 SMARCA4P51532 1647 aa18.83■□□□□ 0.61
SLC12A4-203ENST00000537830 CCDC88BA6NC98 1476 aa18.83■□□□□ 0.6
SLC12A4-203ENST00000537830 UNC13AQ9UPW8 1703 aa18.82■□□□□ 0.6
SLC12A4-203ENST00000537830 BICRAQ9NZM4 1560 aa18.77■□□□□ 0.6
SLC12A4-203ENST00000537830 UBTFP17480 764 aaKnown RBP18.77■□□□□ 0.59
SLC12A4-203ENST00000537830 RANGAP1P46060 587 aaPredicted RBP18.76■□□□□ 0.59
SLC12A4-203ENST00000537830 TRIM26Q12899 539 aaPredicted RBP18.74■□□□□ 0.59
SLC12A4-203ENST00000537830 TOP2AP11388 1531 aaKnown RBP18.73■□□□□ 0.59
SLC12A4-203ENST00000537830 ABCC8Q09428 1581 aa18.72■□□□□ 0.59
SLC12A4-203ENST00000537830 HRCP23327 699 aa18.71■□□□□ 0.59
SLC12A4-203ENST00000537830 BAZ1BQ9UIG0 1483 aaKnown RBP18.63■□□□□ 0.57
SLC12A4-203ENST00000537830 SMARCA2P51531 1590 aa18.62■□□□□ 0.57
SLC12A4-203ENST00000537830 ATAD2BQ9ULI0 1458 aa18.59■□□□□ 0.57
SLC12A4-203ENST00000537830 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.57
SLC12A4-203ENST00000537830 SOGA1O94964 1423 aa18.57■□□□□ 0.56
SLC12A4-203ENST00000537830 WRNQ14191 1432 aaPredicted RBP eCLIP18.5■□□□□ 0.55
SLC12A4-203ENST00000537830 RUSC2Q8N2Y8 1516 aa18.46■□□□□ 0.55
SLC12A4-203ENST00000537830 EIF4G1Q04637 1599 aaKnown RBP18.33■□□□□ 0.53
SLC12A4-203ENST00000537830 APLP2Q06481 763 aa18.3■□□□□ 0.52
SLC12A4-203ENST00000537830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.29■□□□□ 0.52
SLC12A4-203ENST00000537830 CEP162Q5TB80 1403 aa18.29■□□□□ 0.52
SLC12A4-203ENST00000537830 PEG3Q9GZU2 1588 aa18.27■□□□□ 0.52
SLC12A4-203ENST00000537830 CCER1Q8TC90 406 aaPredicted RBP18.26■□□□□ 0.51
SLC12A4-203ENST00000537830 NCAPD3P42695 1498 aa18.22■□□□□ 0.51
SLC12A4-203ENST00000537830 TNIKQ9UKE5 1360 aa18.21■□□□□ 0.51
SLC12A4-203ENST00000537830 PELP1Q8IZL8 1130 aaKnown RBP18.21■□□□□ 0.51
SLC12A4-203ENST00000537830 EEA1Q15075 1411 aa18.2■□□□□ 0.5
SLC12A4-203ENST00000537830 SYNJ1O43426 1573 aa18.2■□□□□ 0.5
SLC12A4-203ENST00000537830 GOLGA3Q08378 1498 aa18.17■□□□□ 0.5
SLC12A4-203ENST00000537830 HNRNPUL2Q1KMD3 747 aaKnown RBP18.16■□□□□ 0.5
SLC12A4-203ENST00000537830 ZEB1P37275 1124 aaPredicted RBP18.13■□□□□ 0.49
SLC12A4-203ENST00000537830 ATP1B4Q9UN42 357 aaPredicted RBP18.1■□□□□ 0.49
SLC12A4-203ENST00000537830 CLIP1P30622 1438 aa18.09■□□□□ 0.49
SLC12A4-203ENST00000537830 CEP164Q9UPV0 1460 aa18.09■□□□□ 0.49
SLC12A4-203ENST00000537830 RAPGEF2Q9Y4G8 1499 aa18.07■□□□□ 0.48
SLC12A4-203ENST00000537830 DNAJC5BQ9UF47 199 aa18.06■□□□□ 0.48
SLC12A4-203ENST00000537830 CADPSQ9ULU8 1353 aa18.04■□□□□ 0.48
SLC12A4-203ENST00000537830 HMGXB3Q12766 1538 aa18.03■□□□□ 0.48
SLC12A4-203ENST00000537830 P3H3Q8IVL6 736 aa18.02■□□□□ 0.47
SLC12A4-203ENST00000537830 CFTRP13569 1480 aa17.99■□□□□ 0.47
SLC12A4-203ENST00000537830 CC2D2AQ9P2K1 1620 aa17.98■□□□□ 0.47
SLC12A4-203ENST00000537830 KIF27Q86VH2 1401 aa17.98■□□□□ 0.47
SLC12A4-203ENST00000537830 ITGAEP38570 1179 aa17.95■□□□□ 0.46
SLC12A4-203ENST00000537830 CUX1P39880 1505 aa17.94■□□□□ 0.46
SLC12A4-203ENST00000537830 CUX2O14529 1486 aa17.94■□□□□ 0.46
SLC12A4-203ENST00000537830 TOP2BQ02880 1626 aa17.91■□□□□ 0.46
SLC12A4-203ENST00000537830 NESP48681 1621 aa17.9■□□□□ 0.46
SLC12A4-203ENST00000537830 FANCD2Q9BXW9 1451 aa17.84■□□□□ 0.45
SLC12A4-203ENST00000537830 VPS8Q8N3P4 1428 aa17.83■□□□□ 0.44
SLC12A4-203ENST00000537830 KANK4Q5T7N3 995 aaPredicted RBP17.82■□□□□ 0.44
SLC12A4-203ENST00000537830 CARMIL1Q5VZK9 1371 aa17.81■□□□□ 0.44
SLC12A4-203ENST00000537830 FGD5Q6ZNL6 1462 aa17.8■□□□□ 0.44
SLC12A4-203ENST00000537830 IGF1RP08069 1367 aa17.79■□□□□ 0.44
SLC12A4-203ENST00000537830 KIF21BO75037 1637 aa17.79■□□□□ 0.44
SLC12A4-203ENST00000537830 MYT1Q01538 1121 aa17.78■□□□□ 0.44
SLC12A4-203ENST00000537830 RAD54L2Q9Y4B4 1467 aa17.77■□□□□ 0.44
SLC12A4-203ENST00000537830 PRXQ9BXM0 1461 aa17.76■□□□□ 0.43
SLC12A4-203ENST00000537830 TDRD9Q8NDG6 1382 aaKnown RBP17.75■□□□□ 0.43
SLC12A4-203ENST00000537830 BIVM-ERCC5R4GMW8 1640 aa17.72■□□□□ 0.43
SLC12A4-203ENST00000537830 FAM50AQ14320 339 aaKnown RBP17.68■□□□□ 0.42
SLC12A4-203ENST00000537830 ARID3CA6NKF2 412 aa17.67■□□□□ 0.42
SLC12A4-203ENST00000537830 ARAP1Q96P48 1450 aa17.66■□□□□ 0.42
SLC12A4-203ENST00000537830 PDS5BQ9NTI5 1447 aa17.62■□□□□ 0.41
SLC12A4-203ENST00000537830 ERICH3Q5RHP9 1530 aa17.6■□□□□ 0.41
SLC12A4-203ENST00000537830 TOPBP1Q92547 1522 aa17.6■□□□□ 0.41
SLC12A4-203ENST00000537830 POLA1P09884 1462 aaPredicted RBP17.6■□□□□ 0.41
SLC12A4-203ENST00000537830 FBLN2P98095 1184 aa17.58■□□□□ 0.4
SLC12A4-203ENST00000537830 ARHGAP35Q9NRY4 1499 aa17.57■□□□□ 0.4
SLC12A4-203ENST00000537830 DIEXFQ68CQ4 756 aaKnown RBP17.56■□□□□ 0.4
SLC12A4-203ENST00000537830 FHOD3Q2V2M9 1422 aa17.53■□□□□ 0.4
SLC12A4-203ENST00000537830 URB2Q14146 1524 aaKnown RBP17.5■□□□□ 0.39
SLC12A4-203ENST00000537830 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
SLC12A4-203ENST00000537830 CCNB3Q8WWL7 1395 aa17.45■□□□□ 0.38
SLC12A4-203ENST00000537830 ZNF316A6NFI3 1004 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms