RNA–Protein interactions for RNA: ENST00000537728.5

ATP6V0A1-204, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2 BASIC

Gene ATP6V0A1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-204ENST00000537728 P3H3Q8IVL6 736 aa23.28■■□□□ 1.32
ATP6V0A1-204ENST00000537728 ZNF316A6NFI3 1004 aaPredicted RBP23.27■■□□□ 1.32
ATP6V0A1-204ENST00000537728 ABCA5Q8WWZ7 1642 aa23.25■■□□□ 1.31
ATP6V0A1-204ENST00000537728 PCF11O94913 1555 aaKnown RBP23.25■■□□□ 1.31
ATP6V0A1-204ENST00000537728 EFCAB5A4FU69 1503 aa23.25■■□□□ 1.31
ATP6V0A1-204ENST00000537728 CFAP43Q8NDM7 1665 aa23.23■■□□□ 1.31
ATP6V0A1-204ENST00000537728 LRRC9Q6ZRR7 1453 aa23.23■■□□□ 1.31
ATP6V0A1-204ENST00000537728 TDRD9Q8NDG6 1382 aaKnown RBP23.22■■□□□ 1.31
ATP6V0A1-204ENST00000537728 FHOD3Q2V2M9 1422 aa23.21■■□□□ 1.31
ATP6V0A1-204ENST00000537728 GAPVD1Q14C86 1478 aa23.2■■□□□ 1.3
ATP6V0A1-204ENST00000537728 DHX57Q6P158 1386 aaKnown RBP23.2■■□□□ 1.3
ATP6V0A1-204ENST00000537728 ATP1B4Q9UN42 357 aaPredicted RBP23.19■■□□□ 1.3
ATP6V0A1-204ENST00000537728 CLSPNQ9HAW4 1339 aa23.19■■□□□ 1.3
ATP6V0A1-204ENST00000537728 ITGAEP38570 1179 aa23.17■■□□□ 1.3
ATP6V0A1-204ENST00000537728 FYCO1Q9BQS8 1478 aa23.15■■□□□ 1.3
ATP6V0A1-204ENST00000537728 TARBP1Q13395 1621 aaKnown RBP23.12■■□□□ 1.29
ATP6V0A1-204ENST00000537728 CASKIN1Q8WXD9 1431 aa23.11■■□□□ 1.29
ATP6V0A1-204ENST00000537728 AQRO60306 1485 aaKnown RBP eCLIP23.11■■□□□ 1.291e-7■■■■■ 40.8
ATP6V0A1-204ENST00000537728 PHLDB1Q86UU1 1377 aa23.1■■□□□ 1.29
ATP6V0A1-204ENST00000537728 FMN1Q68DA7 1419 aa23.08■■□□□ 1.29
ATP6V0A1-204ENST00000537728 SAMD9Q5K651 1589 aa23.05■■□□□ 1.28
ATP6V0A1-204ENST00000537728 PBRM1Q86U86 1689 aa23.05■■□□□ 1.28
ATP6V0A1-204ENST00000537728 FAM50AQ14320 339 aaKnown RBP23.03■■□□□ 1.28
ATP6V0A1-204ENST00000537728 RAB3GAP2Q9H2M9 1393 aa23.01■■□□□ 1.27
ATP6V0A1-204ENST00000537728 MRC2Q9UBG0 1479 aa23■■□□□ 1.27
ATP6V0A1-204ENST00000537728 SNAPC4Q5SXM2 1469 aa23■■□□□ 1.27
ATP6V0A1-204ENST00000537728 SETD5Q9C0A6 1442 aa22.96■■□□□ 1.27
ATP6V0A1-204ENST00000537728 LRRIQ1Q96JM4 1722 aa22.95■■□□□ 1.26
ATP6V0A1-204ENST00000537728 SCAF1Q9H7N4 1312 aaKnown RBP22.94■■□□□ 1.26
ATP6V0A1-204ENST00000537728 MTUS2Q5JR59 1369 aa22.91■■□□□ 1.26
ATP6V0A1-204ENST00000537728 ACIN1Q9UKV3 1341 aaKnown RBP22.91■■□□□ 1.26
ATP6V0A1-204ENST00000537728 ADAMTS12P58397 1594 aa22.9■■□□□ 1.26
ATP6V0A1-204ENST00000537728 CENPBP07199 599 aaPredicted RBP22.9■■□□□ 1.26
ATP6V0A1-204ENST00000537728 GRIN2BQ13224 1484 aa22.89■■□□□ 1.26
ATP6V0A1-204ENST00000537728 THOC2Q8NI27 1593 aaKnown RBP22.89■■□□□ 1.25
ATP6V0A1-204ENST00000537728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.87■■□□□ 1.25
ATP6V0A1-204ENST00000537728 NEUROD1Q13562 356 aa22.87■■□□□ 1.25
ATP6V0A1-204ENST00000537728 IQGAP2Q13576 1575 aa22.86■■□□□ 1.25
ATP6V0A1-204ENST00000537728 MAPKBP1O60336 1514 aa22.86■■□□□ 1.25
ATP6V0A1-204ENST00000537728 FGD6Q6ZV73 1430 aa22.85■■□□□ 1.25
ATP6V0A1-204ENST00000537728 MIER1Q8N108 512 aa22.84■■□□□ 1.25
ATP6V0A1-204ENST00000537728 IFT140Q96RY7 1462 aa22.83■■□□□ 1.25
ATP6V0A1-204ENST00000537728 WDR62O43379 1518 aa22.83■■□□□ 1.24
ATP6V0A1-204ENST00000537728 SUPT6HQ7KZ85 1726 aaKnown RBP22.82■■□□□ 1.24
ATP6V0A1-204ENST00000537728 EHBP1L1Q8N3D4 1523 aa22.8■■□□□ 1.24
ATP6V0A1-204ENST00000537728 ZNF608Q9ULD9 1512 aaPredicted RBP22.79■■□□□ 1.24
ATP6V0A1-204ENST00000537728 NCOA2Q15596 1464 aa22.79■■□□□ 1.24
ATP6V0A1-204ENST00000537728 CCDC18Q5T9S5 1454 aa22.77■■□□□ 1.24
ATP6V0A1-204ENST00000537728 HECW1Q76N89 1606 aa22.77■■□□□ 1.24
ATP6V0A1-204ENST00000537728 MYOM3Q5VTT5 1437 aa22.74■■□□□ 1.23
ATP6V0A1-204ENST00000537728 YTHDC1Q96MU7 727 aaKnown RBP22.72■■□□□ 1.23
ATP6V0A1-204ENST00000537728 ERCC6Q03468 1493 aa22.71■■□□□ 1.23
ATP6V0A1-204ENST00000537728 MAGI3Q5TCQ9 1506 aa22.7■■□□□ 1.22
ATP6V0A1-204ENST00000537728 UGGT2Q9NYU1 1516 aa22.7■■□□□ 1.22
ATP6V0A1-204ENST00000537728 EIF4G3O43432 1585 aaKnown RBP22.7■■□□□ 1.22
ATP6V0A1-204ENST00000537728 PTPN23Q9H3S7 1636 aa22.68■■□□□ 1.22
ATP6V0A1-204ENST00000537728 SIN3AQ96ST3 1273 aa22.67■■□□□ 1.22
ATP6V0A1-204ENST00000537728 EPRSP07814 1512 aaKnown RBP22.67■■□□□ 1.22
ATP6V0A1-204ENST00000537728 ARHGEF11O15085 1522 aa22.66■■□□□ 1.22
ATP6V0A1-204ENST00000537728 PTPRKQ15262 1439 aa22.65■■□□□ 1.22
ATP6V0A1-204ENST00000537728 KIAA0586Q9BVV6 1533 aa22.64■■□□□ 1.21
ATP6V0A1-204ENST00000537728 HFM1A2PYH4 1435 aa22.63■■□□□ 1.21
ATP6V0A1-204ENST00000537728 CDK13Q14004 1512 aaKnown RBP22.63■■□□□ 1.21
ATP6V0A1-204ENST00000537728 GRIN2AQ12879 1464 aa22.62■■□□□ 1.21
ATP6V0A1-204ENST00000537728 GTF3C3Q9Y5Q9 886 aa22.61■■□□□ 1.21
ATP6V0A1-204ENST00000537728 KIAA0556O60303 1618 aa22.61■■□□□ 1.21
ATP6V0A1-204ENST00000537728 TIMELESSQ9UNS1 1208 aa22.58■■□□□ 1.21
ATP6V0A1-204ENST00000537728 ARID3CA6NKF2 412 aa22.58■■□□□ 1.2
ATP6V0A1-204ENST00000537728 DISP1Q96F81 1524 aa22.57■■□□□ 1.2
ATP6V0A1-204ENST00000537728 NAIPQ13075 1403 aa22.57■■□□□ 1.2
ATP6V0A1-204ENST00000537728 UACAQ9BZF9 1416 aa22.56■■□□□ 1.2
ATP6V0A1-204ENST00000537728 TCOF1Q13428 1488 aaKnown RBP22.56■■□□□ 1.2
ATP6V0A1-204ENST00000537728 MAGI1Q96QZ7 1491 aaPredicted RBP22.55■■□□□ 1.2
ATP6V0A1-204ENST00000537728 RAPGEF6Q8TEU7 1601 aa22.51■■□□□ 1.19
ATP6V0A1-204ENST00000537728 CHMP7Q8WUX9 453 aaPredicted RBP22.51■■□□□ 1.19
ATP6V0A1-204ENST00000537728 MIA2Q96PC5 1412 aa22.5■■□□□ 1.19
ATP6V0A1-204ENST00000537728 GCC2Q8IWJ2 1684 aa22.5■■□□□ 1.19
ATP6V0A1-204ENST00000537728 SYNJ2O15056 1496 aa22.49■■□□□ 1.19
ATP6V0A1-204ENST00000537728 CHIC2Q9UKJ5 165 aa22.48■■□□□ 1.19
ATP6V0A1-204ENST00000537728 CEP170Q5SW79 1584 aa22.48■■□□□ 1.19
ATP6V0A1-204ENST00000537728 RRP7BPQ9NSQ0 103 aa22.47■■□□□ 1.19
ATP6V0A1-204ENST00000537728 NUP153P49790 1475 aaKnown RBP22.46■■□□□ 1.19
ATP6V0A1-204ENST00000537728 PPP1R15AO75807 674 aaPredicted RBP22.46■■□□□ 1.19
ATP6V0A1-204ENST00000537728 FBLN2P98095 1184 aa22.46■■□□□ 1.19
ATP6V0A1-204ENST00000537728 TONSLQ96HA7 1378 aa22.46■■□□□ 1.19
ATP6V0A1-204ENST00000537728 CDK11AQ9UQ88 783 aaPredicted RBP22.42■■□□□ 1.18
ATP6V0A1-204ENST00000537728 AKNAQ7Z591 1439 aa22.41■■□□□ 1.18
ATP6V0A1-204ENST00000537728 TRIM52Q96A61 297 aa22.37■■□□□ 1.17
ATP6V0A1-204ENST00000537728 KDM6BO15054 1643 aa22.37■■□□□ 1.17
ATP6V0A1-204ENST00000537728 CARMIL2Q6F5E8 1435 aa22.36■■□□□ 1.17
ATP6V0A1-204ENST00000537728 NUP160Q12769 1436 aa22.35■■□□□ 1.17
ATP6V0A1-204ENST00000537728 PLB1Q6P1J6 1458 aa22.34■■□□□ 1.17
ATP6V0A1-204ENST00000537728 DNMT1P26358 1616 aaKnown RBP22.33■■□□□ 1.17
ATP6V0A1-204ENST00000537728 DAPK1P53355 1430 aa22.33■■□□□ 1.17
ATP6V0A1-204ENST00000537728 JPH4Q96JJ6 628 aa22.33■■□□□ 1.17
ATP6V0A1-204ENST00000537728 DDX10Q13206 875 aaKnown RBP22.33■■□□□ 1.16
ATP6V0A1-204ENST00000537728 TROQ12816 1431 aaPredicted RBP22.31■■□□□ 1.16
ATP6V0A1-204ENST00000537728 HIRIP3Q9BW71 556 aaPredicted RBP22.3■■□□□ 1.16
ATP6V0A1-204ENST00000537728 PRG4Q92954 1404 aaPredicted RBP22.3■■□□□ 1.16
ATP6V0A1-204ENST00000537728 ITSN2Q9NZM3 1697 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms