RNA–Protein interactions for RNA: ENST00000537728.5

ATP6V0A1-204, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2 BASIC

Gene ATP6V0A1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-204ENST00000537728 NISCHQ9Y2I1 1504 aa33.36■■■□□ 2.93
ATP6V0A1-204ENST00000537728 CCDC180Q9P1Z9 1646 aa28.64■■■□□ 2.18
ATP6V0A1-204ENST00000537728 ZCCHC6Q5VYS8 1495 aaKnown RBP28.17■■■□□ 2.1
ATP6V0A1-204ENST00000537728 SHROOM4Q9ULL8 1493 aa28.08■■■□□ 2.09
ATP6V0A1-204ENST00000537728 DCAF8L2P0C7V8 631 aa27.63■■■□□ 2.01
ATP6V0A1-204ENST00000537728 DCAF1Q9Y4B6 1507 aa27.45■■□□□ 1.98
ATP6V0A1-204ENST00000537728 SUPT5HO00267 1087 aaKnown RBP27.41■■□□□ 1.98
ATP6V0A1-204ENST00000537728 MYO15BQ96JP2 1530 aa26.77■■□□□ 1.88
ATP6V0A1-204ENST00000537728 SCRIBQ14160 1630 aa26.67■■□□□ 1.86
ATP6V0A1-204ENST00000537728 ABCC9O60706 1549 aa26.61■■□□□ 1.85
ATP6V0A1-204ENST00000537728 CHIC1Q5VXU3 224 aa26.52■■□□□ 1.84
ATP6V0A1-204ENST00000537728 NACADO15069 1562 aa26.5■■□□□ 1.83
ATP6V0A1-204ENST00000537728 RSF1Q96T23 1441 aaPredicted RBP26.23■■□□□ 1.79
ATP6V0A1-204ENST00000537728 RB1CC1Q8TDY2 1594 aa26.14■■□□□ 1.77
ATP6V0A1-204ENST00000537728 CECR2Q9BXF3 1484 aa25.96■■□□□ 1.75
ATP6V0A1-204ENST00000537728 MROH2BQ7Z745 1585 aa25.88■■□□□ 1.73
ATP6V0A1-204ENST00000537728 WIZO95785 1651 aa25.77■■□□□ 1.72
ATP6V0A1-204ENST00000537728 UNC13AQ9UPW8 1703 aa25.77■■□□□ 1.72
ATP6V0A1-204ENST00000537728 BAZ1AQ9NRL2 1556 aaPredicted RBP25.69■■□□□ 1.7
ATP6V0A1-204ENST00000537728 LOC105371045A0A1W2PR82 267 aa25.67■■□□□ 1.7
ATP6V0A1-204ENST00000537728 TRIM41Q8WV44 630 aa25.61■■□□□ 1.69
ATP6V0A1-204ENST00000537728 SMARCA4P51532 1647 aa25.51■■□□□ 1.67
ATP6V0A1-204ENST00000537728 TOP2AP11388 1531 aaKnown RBP25.39■■□□□ 1.66
ATP6V0A1-204ENST00000537728 PCGF6Q9BYE7 350 aa25.37■■□□□ 1.65
ATP6V0A1-204ENST00000537728 BICRAQ9NZM4 1560 aa25.36■■□□□ 1.65
ATP6V0A1-204ENST00000537728 PABPN1Q86U42 306 aaKnown RBP eCLIP25.32■■□□□ 1.64
ATP6V0A1-204ENST00000537728 FAM9AQ8IZU1 332 aaPredicted RBP25.32■■□□□ 1.64
ATP6V0A1-204ENST00000537728 EIF4G1Q04637 1599 aaKnown RBP25.29■■□□□ 1.64
ATP6V0A1-204ENST00000537728 SMARCA2P51531 1590 aa25.22■■□□□ 1.63
ATP6V0A1-204ENST00000537728 CCDC88BA6NC98 1476 aa25.21■■□□□ 1.63
ATP6V0A1-204ENST00000537728 HRCP23327 699 aa25.18■■□□□ 1.62
ATP6V0A1-204ENST00000537728 EHMT2Q96KQ7 1210 aa25.06■■□□□ 1.6
ATP6V0A1-204ENST00000537728 PEG3Q9GZU2 1588 aa25.05■■□□□ 1.6
ATP6V0A1-204ENST00000537728 ABCC8Q09428 1581 aa25.04■■□□□ 1.6
ATP6V0A1-204ENST00000537728 TRIM26Q12899 539 aaPredicted RBP25.03■■□□□ 1.6
ATP6V0A1-204ENST00000537728 ATAD2BQ9ULI0 1458 aa24.87■■□□□ 1.57
ATP6V0A1-204ENST00000537728 BAZ1BQ9UIG0 1483 aaKnown RBP24.82■■□□□ 1.56
ATP6V0A1-204ENST00000537728 SOGA1O94964 1423 aa24.7■■□□□ 1.55
ATP6V0A1-204ENST00000537728 WRNQ14191 1432 aaPredicted RBP eCLIP24.68■■□□□ 1.54
ATP6V0A1-204ENST00000537728 EEA1Q15075 1411 aa24.65■■□□□ 1.54
ATP6V0A1-204ENST00000537728 PPARGC1BQ86YN6 1023 aaKnown RBP24.62■■□□□ 1.53
ATP6V0A1-204ENST00000537728 RUSC2Q8N2Y8 1516 aa24.59■■□□□ 1.53
ATP6V0A1-204ENST00000537728 SYNJ1O43426 1573 aa24.57■■□□□ 1.52
ATP6V0A1-204ENST00000537728 CSRNP3Q8WYN3 585 aa24.57■■□□□ 1.52
ATP6V0A1-204ENST00000537728 TNIKQ9UKE5 1360 aa24.49■■□□□ 1.51
ATP6V0A1-204ENST00000537728 CEP162Q5TB80 1403 aa24.49■■□□□ 1.51
ATP6V0A1-204ENST00000537728 HMGXB3Q12766 1538 aa24.49■■□□□ 1.51
ATP6V0A1-204ENST00000537728 NCAPD3P42695 1498 aa24.46■■□□□ 1.51
ATP6V0A1-204ENST00000537728 UBTFP17480 764 aaKnown RBP24.45■■□□□ 1.5
ATP6V0A1-204ENST00000537728 GOLGA3Q08378 1498 aa24.44■■□□□ 1.5
ATP6V0A1-204ENST00000537728 ZEB1P37275 1124 aaPredicted RBP24.4■■□□□ 1.5
ATP6V0A1-204ENST00000537728 TOP2BQ02880 1626 aa24.35■■□□□ 1.49
ATP6V0A1-204ENST00000537728 KIF21BO75037 1637 aa24.34■■□□□ 1.49
ATP6V0A1-204ENST00000537728 CEP164Q9UPV0 1460 aa24.34■■□□□ 1.49
ATP6V0A1-204ENST00000537728 BIVM-ERCC5R4GMW8 1640 aa24.3■■□□□ 1.48
ATP6V0A1-204ENST00000537728 TTBK1Q5TCY1 1321 aaPredicted RBP24.19■■□□□ 1.46
ATP6V0A1-204ENST00000537728 CFTRP13569 1480 aa24.17■■□□□ 1.46
ATP6V0A1-204ENST00000537728 RAPGEF2Q9Y4G8 1499 aa24.14■■□□□ 1.46
ATP6V0A1-204ENST00000537728 PRDM2Q13029 1718 aa24.14■■□□□ 1.45
ATP6V0A1-204ENST00000537728 CUX1P39880 1505 aa24.13■■□□□ 1.45
ATP6V0A1-204ENST00000537728 CLIP1P30622 1438 aa24.11■■□□□ 1.45
ATP6V0A1-204ENST00000537728 CC2D2AQ9P2K1 1620 aa24.03■■□□□ 1.44
ATP6V0A1-204ENST00000537728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.03■■□□□ 1.44
ATP6V0A1-204ENST00000537728 ERICH3Q5RHP9 1530 aa24■■□□□ 1.43
ATP6V0A1-204ENST00000537728 CCER1Q8TC90 406 aaPredicted RBP24■■□□□ 1.43
ATP6V0A1-204ENST00000537728 VPS8Q8N3P4 1428 aa23.98■■□□□ 1.43
ATP6V0A1-204ENST00000537728 KIF27Q86VH2 1401 aa23.97■■□□□ 1.43
ATP6V0A1-204ENST00000537728 PRXQ9BXM0 1461 aa23.97■■□□□ 1.43
ATP6V0A1-204ENST00000537728 RANGAP1P46060 587 aaPredicted RBP23.96■■□□□ 1.43
ATP6V0A1-204ENST00000537728 CADPSQ9ULU8 1353 aa23.95■■□□□ 1.42
ATP6V0A1-204ENST00000537728 APLP2Q06481 763 aa23.89■■□□□ 1.41
ATP6V0A1-204ENST00000537728 CUX2O14529 1486 aa23.78■■□□□ 1.4
ATP6V0A1-204ENST00000537728 FGD5Q6ZNL6 1462 aa23.76■■□□□ 1.39
ATP6V0A1-204ENST00000537728 ARAP1Q96P48 1450 aa23.75■■□□□ 1.39
ATP6V0A1-204ENST00000537728 FANCD2Q9BXW9 1451 aa23.73■■□□□ 1.39
ATP6V0A1-204ENST00000537728 HNRNPUL2Q1KMD3 747 aaKnown RBP23.68■■□□□ 1.38
ATP6V0A1-204ENST00000537728 IGF1RP08069 1367 aa23.68■■□□□ 1.38
ATP6V0A1-204ENST00000537728 DNMBPQ6XZF7 1577 aa23.62■■□□□ 1.37
ATP6V0A1-204ENST00000537728 NESP48681 1621 aa23.61■■□□□ 1.37
ATP6V0A1-204ENST00000537728 ARHGAP35Q9NRY4 1499 aa23.6■■□□□ 1.37
ATP6V0A1-204ENST00000537728 CARMIL1Q5VZK9 1371 aa23.6■■□□□ 1.37
ATP6V0A1-204ENST00000537728 TOPBP1Q92547 1522 aa23.55■■□□□ 1.36
ATP6V0A1-204ENST00000537728 LAMC3Q9Y6N6 1575 aa23.53■■□□□ 1.36
ATP6V0A1-204ENST00000537728 KANK4Q5T7N3 995 aaPredicted RBP23.52■■□□□ 1.35
ATP6V0A1-204ENST00000537728 RAD54L2Q9Y4B4 1467 aa23.51■■□□□ 1.35
ATP6V0A1-204ENST00000537728 POLA1P09884 1462 aaPredicted RBP23.51■■□□□ 1.35
ATP6V0A1-204ENST00000537728 ABCA10Q8WWZ4 1543 aa23.49■■□□□ 1.35
ATP6V0A1-204ENST00000537728 CUL7Q14999 1698 aa23.39■■□□□ 1.34
ATP6V0A1-204ENST00000537728 URB2Q14146 1524 aaKnown RBP23.39■■□□□ 1.33
ATP6V0A1-204ENST00000537728 RRBP1Q9P2E9 1410 aaKnown RBP23.37■■□□□ 1.33
ATP6V0A1-204ENST00000537728 WDR97A6NE52 1622 aa23.36■■□□□ 1.33
ATP6V0A1-204ENST00000537728 PDS5BQ9NTI5 1447 aa23.35■■□□□ 1.33
ATP6V0A1-204ENST00000537728 TIAM1Q13009 1591 aa23.34■■□□□ 1.33
ATP6V0A1-204ENST00000537728 DIEXFQ68CQ4 756 aaKnown RBP23.34■■□□□ 1.33
ATP6V0A1-204ENST00000537728 MAP3K1Q13233 1512 aa23.32■■□□□ 1.32
ATP6V0A1-204ENST00000537728 CTTNBP2Q8WZ74 1663 aa23.32■■□□□ 1.32
ATP6V0A1-204ENST00000537728 KIF21AQ7Z4S6 1674 aa23.31■■□□□ 1.32
ATP6V0A1-204ENST00000537728 DNAJC5BQ9UF47 199 aa23.31■■□□□ 1.32
ATP6V0A1-204ENST00000537728 FHAD1B1AJZ9 1412 aa23.31■■□□□ 1.32
ATP6V0A1-204ENST00000537728 CCNB3Q8WWL7 1395 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms