RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 JPH4Q96JJ6 628 aa30.57■■■□□ 2.48
TNFRSF1A-209ENST00000536717 PRG4Q92954 1404 aaPredicted RBP30.54■■■□□ 2.48
TNFRSF1A-209ENST00000536717 KIAA0586Q9BVV6 1533 aa30.53■■■□□ 2.48
TNFRSF1A-209ENST00000536717 RAPGEF2Q9Y4G8 1499 aa30.39■■■□□ 2.46
TNFRSF1A-209ENST00000536717 TRHP20396 242 aaPredicted RBP30.38■■■□□ 2.45
TNFRSF1A-209ENST00000536717 IQGAP2Q13576 1575 aa30.33■■■□□ 2.45
TNFRSF1A-209ENST00000536717 PRXQ9BXM0 1461 aa30.22■■■□□ 2.43
TNFRSF1A-209ENST00000536717 CTTNBP2Q8WZ74 1663 aa30.21■■■□□ 2.43
TNFRSF1A-209ENST00000536717 ADCY10Q96PN6 1610 aa30.19■■■□□ 2.42
TNFRSF1A-209ENST00000536717 CARMIL2Q6F5E8 1435 aa30.18■■■□□ 2.42
TNFRSF1A-209ENST00000536717 DISP1Q96F81 1524 aa30.16■■■□□ 2.42
TNFRSF1A-209ENST00000536717 UGGT2Q9NYU1 1516 aa30.16■■■□□ 2.42
TNFRSF1A-209ENST00000536717 TNIKQ9UKE5 1360 aa30.12■■■□□ 2.41
TNFRSF1A-209ENST00000536717 PTPRGP23470 1445 aa30.12■■■□□ 2.41
TNFRSF1A-209ENST00000536717 KIF13AQ9H1H9 1805 aa30.09■■■□□ 2.41
TNFRSF1A-209ENST00000536717 KIAA0556O60303 1618 aa30.07■■■□□ 2.4
TNFRSF1A-209ENST00000536717 CSRNP3Q8WYN3 585 aa30.06■■■□□ 2.4
TNFRSF1A-209ENST00000536717 EEA1Q15075 1411 aa30.04■■■□□ 2.4
TNFRSF1A-209ENST00000536717 TTBK1Q5TCY1 1321 aaPredicted RBP30.04■■■□□ 2.4
TNFRSF1A-209ENST00000536717 MAPKBP1O60336 1514 aa30.04■■■□□ 2.4
TNFRSF1A-209ENST00000536717 NPM1P06748 294 aaKnown RBP eCLIP30.01■■■□□ 2.4
TNFRSF1A-209ENST00000536717 CHIC1Q5VXU3 224 aa29.98■■■□□ 2.39
TNFRSF1A-209ENST00000536717 UHRF1BP1LA0JNW5 1464 aa29.93■■■□□ 2.38
TNFRSF1A-209ENST00000536717 ABCC2Q92887 1545 aa29.93■■■□□ 2.38
TNFRSF1A-209ENST00000536717 ABCC10Q5T3U5 1492 aa29.93■■■□□ 2.38
TNFRSF1A-209ENST00000536717 UACAQ9BZF9 1416 aa29.92■■■□□ 2.38
TNFRSF1A-209ENST00000536717 GOLGA3Q08378 1498 aa29.91■■■□□ 2.38
TNFRSF1A-209ENST00000536717 DIP2BQ9P265 1576 aa29.9■■■□□ 2.38
TNFRSF1A-209ENST00000536717 FAM9AQ8IZU1 332 aaPredicted RBP29.9■■■□□ 2.38
TNFRSF1A-209ENST00000536717 FAM69CQ0P6D2 419 aa29.83■■■□□ 2.37
TNFRSF1A-209ENST00000536717 KIF21BO75037 1637 aa29.83■■■□□ 2.37
TNFRSF1A-209ENST00000536717 KDM5BQ9UGL1 1544 aa29.81■■■□□ 2.36
TNFRSF1A-209ENST00000536717 PLB1Q6P1J6 1458 aa29.78■■■□□ 2.36
TNFRSF1A-209ENST00000536717 ZCCHC11Q5TAX3 1644 aaKnown RBP29.78■■■□□ 2.36
TNFRSF1A-209ENST00000536717 SAMD9Q5K651 1589 aa29.77■■■□□ 2.36
TNFRSF1A-209ENST00000536717 ASXL2Q76L83 1435 aa29.77■■■□□ 2.36
TNFRSF1A-209ENST00000536717 ABCA8O94911 1581 aa29.76■■■□□ 2.35
TNFRSF1A-209ENST00000536717 TSPOAP1O95153 1857 aa29.73■■■□□ 2.35
TNFRSF1A-209ENST00000536717 P3H3Q8IVL6 736 aa29.69■■■□□ 2.34
TNFRSF1A-209ENST00000536717 GLI2P10070 1586 aa29.66■■■□□ 2.34
TNFRSF1A-209ENST00000536717 EPRSP07814 1512 aaKnown RBP29.6■■■□□ 2.33
TNFRSF1A-209ENST00000536717 PPRC1Q5VV67 1664 aaKnown RBP29.59■■■□□ 2.33
TNFRSF1A-209ENST00000536717 RANGAP1P46060 587 aaPredicted RBP29.58■■■□□ 2.33
TNFRSF1A-209ENST00000536717 WDR7Q9Y4E6 1490 aa29.57■■■□□ 2.32
TNFRSF1A-209ENST00000536717 RAPGEF6Q8TEU7 1601 aa29.55■■■□□ 2.32
TNFRSF1A-209ENST00000536717 MAP3K4Q9Y6R4 1608 aa29.55■■■□□ 2.32
TNFRSF1A-209ENST00000536717 FHOD3Q2V2M9 1422 aa29.54■■■□□ 2.32
TNFRSF1A-209ENST00000536717 EHMT2Q96KQ7 1210 aa29.54■■■□□ 2.32
TNFRSF1A-209ENST00000536717 EFCAB5A4FU69 1503 aa29.53■■■□□ 2.32
TNFRSF1A-209ENST00000536717 UBTFP17480 764 aaKnown RBP29.5■■■□□ 2.31
TNFRSF1A-209ENST00000536717 KDM6BO15054 1643 aa29.49■■■□□ 2.31
TNFRSF1A-209ENST00000536717 ATP10BO94823 1461 aa29.49■■■□□ 2.31
TNFRSF1A-209ENST00000536717 ARID3CA6NKF2 412 aa29.45■■■□□ 2.3
TNFRSF1A-209ENST00000536717 NUP153P49790 1475 aaKnown RBP29.42■■■□□ 2.3
TNFRSF1A-209ENST00000536717 CFAP43Q8NDM7 1665 aa29.41■■■□□ 2.3
TNFRSF1A-209ENST00000536717 KCNH8Q96L42 1107 aa29.38■■■□□ 2.29
TNFRSF1A-209ENST00000536717 ARHGAP35Q9NRY4 1499 aa29.36■■■□□ 2.29
TNFRSF1A-209ENST00000536717 TEX14Q8IWB6 1497 aa29.35■■■□□ 2.29
TNFRSF1A-209ENST00000536717 CD109Q6YHK3 1445 aa29.31■■■□□ 2.28
TNFRSF1A-209ENST00000536717 MAGI3Q5TCQ9 1506 aa29.29■■■□□ 2.28
TNFRSF1A-209ENST00000536717 COL17A1Q9UMD9 1497 aaPredicted RBP29.28■■■□□ 2.28
TNFRSF1A-209ENST00000536717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.27■■■□□ 2.28
TNFRSF1A-209ENST00000536717 HNRNPUL2Q1KMD3 747 aaKnown RBP29.27■■■□□ 2.28
TNFRSF1A-209ENST00000536717 ABCA9Q8IUA7 1624 aa29.26■■■□□ 2.28
TNFRSF1A-209ENST00000536717 FMN1Q68DA7 1419 aa29.23■■■□□ 2.27
TNFRSF1A-209ENST00000536717 CDK13Q14004 1512 aaKnown RBP29.18■■■□□ 2.26
TNFRSF1A-209ENST00000536717 HECW1Q76N89 1606 aa29.17■■■□□ 2.26
TNFRSF1A-209ENST00000536717 PLEKHD1A6NEE1 506 aa29.14■■■□□ 2.25
TNFRSF1A-209ENST00000536717 LRRIQ1Q96JM4 1722 aa29.12■■■□□ 2.25
TNFRSF1A-209ENST00000536717 ATP1B4Q9UN42 357 aaPredicted RBP29.07■■■□□ 2.24
TNFRSF1A-209ENST00000536717 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.06■■■□□ 2.24
TNFRSF1A-209ENST00000536717 AEBP2Q6ZN18 517 aaPredicted RBP29.06■■■□□ 2.24
TNFRSF1A-209ENST00000536717 ARAP3Q8WWN8 1544 aa29.05■■■□□ 2.24
TNFRSF1A-209ENST00000536717 TTC37Q6PGP7 1564 aa29.04■■■□□ 2.24
TNFRSF1A-209ENST00000536717 PCF11O94913 1555 aaKnown RBP29.04■■■□□ 2.24
TNFRSF1A-209ENST00000536717 CLIP1P30622 1438 aa29.03■■■□□ 2.24
TNFRSF1A-209ENST00000536717 NEO1Q92859 1461 aa29.01■■■□□ 2.23
TNFRSF1A-209ENST00000536717 PHLDB1Q86UU1 1377 aa28.99■■■□□ 2.23
TNFRSF1A-209ENST00000536717 CASKIN1Q8WXD9 1431 aa28.99■■■□□ 2.23
TNFRSF1A-209ENST00000536717 KDM4FA0A1W2PPD8 638 aa28.95■■■□□ 2.23
TNFRSF1A-209ENST00000536717 KIF14Q15058 1648 aa28.93■■■□□ 2.22
TNFRSF1A-209ENST00000536717 CDK11AQ9UQ88 783 aaPredicted RBP28.93■■■□□ 2.22
TNFRSF1A-209ENST00000536717 CCDC18Q5T9S5 1454 aa28.91■■■□□ 2.22
TNFRSF1A-209ENST00000536717 FYCO1Q9BQS8 1478 aa28.91■■■□□ 2.22
TNFRSF1A-209ENST00000536717 CFAP74Q9C0B2 1584 aa28.91■■■□□ 2.22
TNFRSF1A-209ENST00000536717 TROQ12816 1431 aaPredicted RBP28.91■■■□□ 2.22
TNFRSF1A-209ENST00000536717 FANCAO15360 1455 aa28.9■■■□□ 2.22
TNFRSF1A-209ENST00000536717 FRMPD1Q5SYB0 1578 aa28.89■■■□□ 2.22
TNFRSF1A-209ENST00000536717 MYO5CQ9NQX4 1742 aa28.89■■■□□ 2.22
TNFRSF1A-209ENST00000536717 AKNAQ7Z591 1439 aa28.87■■■□□ 2.21
TNFRSF1A-209ENST00000536717 RAPGEF3O95398 923 aa28.86■■■□□ 2.21
TNFRSF1A-209ENST00000536717 PLCH2O75038 1416 aa28.85■■■□□ 2.21
TNFRSF1A-209ENST00000536717 RICTORQ6R327 1708 aa28.85■■■□□ 2.21
TNFRSF1A-209ENST00000536717 ADGRL1O94910 1474 aa28.85■■■□□ 2.21
TNFRSF1A-209ENST00000536717 CEP162Q5TB80 1403 aa28.84■■■□□ 2.21
TNFRSF1A-209ENST00000536717 DENND4BO75064 1496 aaPredicted RBP28.79■■■□□ 2.2
TNFRSF1A-209ENST00000536717 LOC105371045A0A1W2PR82 267 aa28.76■■■□□ 2.19
TNFRSF1A-209ENST00000536717 CDC42BPBQ9Y5S2 1711 aa28.76■■■□□ 2.19
TNFRSF1A-209ENST00000536717 ARHGAP5Q13017 1502 aa28.7■■■□□ 2.19
TNFRSF1A-209ENST00000536717 ZMYM4Q5VZL5 1548 aa28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms