RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 NPM1P06748 294 aaKnown RBP eCLIP22.79■■□□□ 1.24
TNFRSF1A-207ENST00000535958 KIF13AQ9H1H9 1805 aa22.78■■□□□ 1.24
TNFRSF1A-207ENST00000535958 KIF27Q86VH2 1401 aa22.76■■□□□ 1.23
TNFRSF1A-207ENST00000535958 CUL7Q14999 1698 aa22.76■■□□□ 1.23
TNFRSF1A-207ENST00000535958 KIAA0586Q9BVV6 1533 aa22.71■■□□□ 1.23
TNFRSF1A-207ENST00000535958 MAPKBP1O60336 1514 aa22.68■■□□□ 1.22
TNFRSF1A-207ENST00000535958 FAM69CQ0P6D2 419 aa22.68■■□□□ 1.22
TNFRSF1A-207ENST00000535958 ABCC10Q5T3U5 1492 aa22.67■■□□□ 1.22
TNFRSF1A-207ENST00000535958 IGF1RP08069 1367 aa22.66■■□□□ 1.22
TNFRSF1A-207ENST00000535958 ADCY10Q96PN6 1610 aa22.66■■□□□ 1.22
TNFRSF1A-207ENST00000535958 DIP2BQ9P265 1576 aa22.63■■□□□ 1.21
TNFRSF1A-207ENST00000535958 CARMIL1Q5VZK9 1371 aa22.57■■□□□ 1.2
TNFRSF1A-207ENST00000535958 CARMIL2Q6F5E8 1435 aa22.57■■□□□ 1.2
TNFRSF1A-207ENST00000535958 TTBK1Q5TCY1 1321 aaPredicted RBP22.57■■□□□ 1.2
TNFRSF1A-207ENST00000535958 PTPRGP23470 1445 aa22.55■■□□□ 1.2
TNFRSF1A-207ENST00000535958 KDM6BO15054 1643 aa22.53■■□□□ 1.2
TNFRSF1A-207ENST00000535958 IQGAP2Q13576 1575 aa22.51■■□□□ 1.19
TNFRSF1A-207ENST00000535958 TSPOAP1O95153 1857 aa22.51■■□□□ 1.19
TNFRSF1A-207ENST00000535958 TNIKQ9UKE5 1360 aa22.5■■□□□ 1.19
TNFRSF1A-207ENST00000535958 ABCC2Q92887 1545 aa22.45■■□□□ 1.18
TNFRSF1A-207ENST00000535958 PLB1Q6P1J6 1458 aa22.4■■□□□ 1.18
TNFRSF1A-207ENST00000535958 ASXL2Q76L83 1435 aa22.39■■□□□ 1.17
TNFRSF1A-207ENST00000535958 UHRF1BP1LA0JNW5 1464 aa22.37■■□□□ 1.17
TNFRSF1A-207ENST00000535958 RAPGEF2Q9Y4G8 1499 aa22.37■■□□□ 1.17
TNFRSF1A-207ENST00000535958 UACAQ9BZF9 1416 aa22.37■■□□□ 1.17
TNFRSF1A-207ENST00000535958 DISP1Q96F81 1524 aa22.34■■□□□ 1.17
TNFRSF1A-207ENST00000535958 GLI2P10070 1586 aa22.33■■□□□ 1.16
TNFRSF1A-207ENST00000535958 UGGT2Q9NYU1 1516 aa22.31■■□□□ 1.16
TNFRSF1A-207ENST00000535958 KIAA0556O60303 1618 aa22.3■■□□□ 1.16
TNFRSF1A-207ENST00000535958 KDM5BQ9UGL1 1544 aa22.26■■□□□ 1.15
TNFRSF1A-207ENST00000535958 PPRC1Q5VV67 1664 aaKnown RBP22.26■■□□□ 1.15
TNFRSF1A-207ENST00000535958 ZCCHC11Q5TAX3 1644 aaKnown RBP22.25■■□□□ 1.15
TNFRSF1A-207ENST00000535958 CTTNBP2Q8WZ74 1663 aa22.24■■□□□ 1.15
TNFRSF1A-207ENST00000535958 KDM4FA0A1W2PPD8 638 aa22.24■■□□□ 1.15
TNFRSF1A-207ENST00000535958 EPRSP07814 1512 aaKnown RBP22.24■■□□□ 1.15
TNFRSF1A-207ENST00000535958 TEX14Q8IWB6 1497 aa22.23■■□□□ 1.15
TNFRSF1A-207ENST00000535958 MAP3K4Q9Y6R4 1608 aa22.21■■□□□ 1.15
TNFRSF1A-207ENST00000535958 GOLGA3Q08378 1498 aa22.2■■□□□ 1.14
TNFRSF1A-207ENST00000535958 WDR7Q9Y4E6 1490 aa22.16■■□□□ 1.14
TNFRSF1A-207ENST00000535958 ADGRL1O94910 1474 aa22.13■■□□□ 1.13
TNFRSF1A-207ENST00000535958 FAM9AQ8IZU1 332 aaPredicted RBP22.12■■□□□ 1.13
TNFRSF1A-207ENST00000535958 COL17A1Q9UMD9 1497 aaPredicted RBP22.07■■□□□ 1.12
TNFRSF1A-207ENST00000535958 CFAP43Q8NDM7 1665 aa22.07■■□□□ 1.12
TNFRSF1A-207ENST00000535958 ABCA8O94911 1581 aa22.06■■□□□ 1.12
TNFRSF1A-207ENST00000535958 PRXQ9BXM0 1461 aa22.04■■□□□ 1.12
TNFRSF1A-207ENST00000535958 KCNH8Q96L42 1107 aa22.04■■□□□ 1.12
TNFRSF1A-207ENST00000535958 CD109Q6YHK3 1445 aa22.04■■□□□ 1.12
TNFRSF1A-207ENST00000535958 MAGI3Q5TCQ9 1506 aa22.01■■□□□ 1.11
TNFRSF1A-207ENST00000535958 ARID3CA6NKF2 412 aa21.93■■□□□ 1.1
TNFRSF1A-207ENST00000535958 P3H3Q8IVL6 736 aa21.93■■□□□ 1.1
TNFRSF1A-207ENST00000535958 HECW2Q9P2P5 1572 aa21.87■■□□□ 1.09
TNFRSF1A-207ENST00000535958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.86■■□□□ 1.09
TNFRSF1A-207ENST00000535958 HNRNPUL2Q1KMD3 747 aaKnown RBP21.86■■□□□ 1.09
TNFRSF1A-207ENST00000535958 CSRNP3Q8WYN3 585 aa21.86■■□□□ 1.09
TNFRSF1A-207ENST00000535958 SAMD9Q5K651 1589 aa21.86■■□□□ 1.09
TNFRSF1A-207ENST00000535958 ATP10BO94823 1461 aa21.85■■□□□ 1.09
TNFRSF1A-207ENST00000535958 KIF21BO75037 1637 aa21.84■■□□□ 1.09
TNFRSF1A-207ENST00000535958 RAPGEF6Q8TEU7 1601 aa21.84■■□□□ 1.09
TNFRSF1A-207ENST00000535958 ARAP3Q8WWN8 1544 aa21.83■■□□□ 1.09
TNFRSF1A-207ENST00000535958 ABCA9Q8IUA7 1624 aa21.82■■□□□ 1.08
TNFRSF1A-207ENST00000535958 PHLDB1Q86UU1 1377 aa21.8■■□□□ 1.08
TNFRSF1A-207ENST00000535958 EEA1Q15075 1411 aa21.8■■□□□ 1.08
TNFRSF1A-207ENST00000535958 RANGAP1P46060 587 aaPredicted RBP21.79■■□□□ 1.08
TNFRSF1A-207ENST00000535958 ILDR1Q86SU0 546 aaPredicted RBP21.77■■□□□ 1.08
TNFRSF1A-207ENST00000535958 NEO1Q92859 1461 aa21.75■■□□□ 1.07
TNFRSF1A-207ENST00000535958 FHOD3Q2V2M9 1422 aa21.72■■□□□ 1.07
TNFRSF1A-207ENST00000535958 NUP153P49790 1475 aaKnown RBP21.71■■□□□ 1.07
TNFRSF1A-207ENST00000535958 RAPGEF3O95398 923 aa21.69■■□□□ 1.06
TNFRSF1A-207ENST00000535958 ARID4BQ4LE39 1312 aaPredicted RBP21.67■■□□□ 1.06
TNFRSF1A-207ENST00000535958 PLEKHD1A6NEE1 506 aa21.67■■□□□ 1.06
TNFRSF1A-207ENST00000535958 EFCAB5A4FU69 1503 aa21.66■■□□□ 1.06
TNFRSF1A-207ENST00000535958 CFAP74Q9C0B2 1584 aa21.65■■□□□ 1.06
TNFRSF1A-207ENST00000535958 FRMPD1Q5SYB0 1578 aa21.63■■□□□ 1.05
TNFRSF1A-207ENST00000535958 ADAMTSL3P82987 1691 aa21.63■■□□□ 1.05
TNFRSF1A-207ENST00000535958 PTPRMP28827 1452 aa21.62■■□□□ 1.05
TNFRSF1A-207ENST00000535958 DENND4BO75064 1496 aaPredicted RBP21.61■■□□□ 1.05
TNFRSF1A-207ENST00000535958 BCORL1Q5H9F3 1711 aa21.6■■□□□ 1.05
TNFRSF1A-207ENST00000535958 ARHGEF40Q8TER5 1519 aa21.6■■□□□ 1.05
TNFRSF1A-207ENST00000535958 FANCAO15360 1455 aa21.58■■□□□ 1.05
TNFRSF1A-207ENST00000535958 AKNAQ7Z591 1439 aa21.57■■□□□ 1.04
TNFRSF1A-207ENST00000535958 MADDQ8WXG6 1647 aa21.57■■□□□ 1.04
TNFRSF1A-207ENST00000535958 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.56■■□□□ 1.04
TNFRSF1A-207ENST00000535958 RICTORQ6R327 1708 aa21.55■■□□□ 1.04
TNFRSF1A-207ENST00000535958 TTC37Q6PGP7 1564 aa21.55■■□□□ 1.04
TNFRSF1A-207ENST00000535958 CDK13Q14004 1512 aaKnown RBP21.52■■□□□ 1.04
TNFRSF1A-207ENST00000535958 POGZQ7Z3K3 1410 aa21.52■■□□□ 1.04
TNFRSF1A-207ENST00000535958 RIMS1Q86UR5 1692 aaKnown RBP21.51■■□□□ 1.03
TNFRSF1A-207ENST00000535958 ATP1B4Q9UN42 357 aaPredicted RBP21.51■■□□□ 1.03
TNFRSF1A-207ENST00000535958 UBTFP17480 764 aaKnown RBP21.5■■□□□ 1.03
TNFRSF1A-207ENST00000535958 HECW1Q76N89 1606 aa21.5■■□□□ 1.03
TNFRSF1A-207ENST00000535958 ZFYVE16Q7Z3T8 1539 aa21.5■■□□□ 1.03
TNFRSF1A-207ENST00000535958 PCF11O94913 1555 aaKnown RBP21.49■■□□□ 1.03
TNFRSF1A-207ENST00000535958 EHMT2Q96KQ7 1210 aa21.49■■□□□ 1.03
TNFRSF1A-207ENST00000535958 ZMYM4Q5VZL5 1548 aa21.49■■□□□ 1.03
TNFRSF1A-207ENST00000535958 FMN1Q68DA7 1419 aa21.48■■□□□ 1.03
TNFRSF1A-207ENST00000535958 MAGI2Q86UL8 1455 aa21.45■■□□□ 1.03
TNFRSF1A-207ENST00000535958 PLPPR3Q6T4P5 718 aa21.44■■□□□ 1.02
TNFRSF1A-207ENST00000535958 CDK11AQ9UQ88 783 aaPredicted RBP21.44■■□□□ 1.02
TNFRSF1A-207ENST00000535958 PLCH2O75038 1416 aa21.42■■□□□ 1.02
TNFRSF1A-207ENST00000535958 LMTK3Q96Q04 1460 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms