RNA–Protein interactions for RNA: ENST00000535561.5

SOD2-209, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-209ENST00000535561 SHROOM2Q13796 1616 aa23.88■■□□□ 1.41
SOD2-209ENST00000535561 JPH4Q96JJ6 628 aa23.87■■□□□ 1.41
SOD2-209ENST00000535561 ARHGEF11O15085 1522 aa23.86■■□□□ 1.41
SOD2-209ENST00000535561 IQGAP2Q13576 1575 aa23.85■■□□□ 1.41
SOD2-209ENST00000535561 GOLGA3Q08378 1498 aa23.83■■□□□ 1.41
SOD2-209ENST00000535561 PRG4Q92954 1404 aaPredicted RBP23.79■■□□□ 1.4
SOD2-209ENST00000535561 RIMBP3CA6NJZ7 1639 aa23.78■■□□□ 1.4
SOD2-209ENST00000535561 RIMBP3BA6NNM3 1639 aa23.78■■□□□ 1.4
SOD2-209ENST00000535561 RIMBP3Q9UFD9 1639 aa23.78■■□□□ 1.4
SOD2-209ENST00000535561 CTTNBP2Q8WZ74 1663 aa23.77■■□□□ 1.4
SOD2-209ENST00000535561 UGGT2Q9NYU1 1516 aa23.77■■□□□ 1.4
SOD2-209ENST00000535561 CARMIL2Q6F5E8 1435 aa23.75■■□□□ 1.39
SOD2-209ENST00000535561 UBTFP17480 764 aaKnown RBP23.7■■□□□ 1.38
SOD2-209ENST00000535561 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
SOD2-209ENST00000535561 ERCC6L2Q5T890 1561 aa23.66■■□□□ 1.38
SOD2-209ENST00000535561 DISP1Q96F81 1524 aa23.65■■□□□ 1.38
SOD2-209ENST00000535561 TNIKQ9UKE5 1360 aa23.62■■□□□ 1.37
SOD2-209ENST00000535561 CYB5RLQ6IPT4 315 aa23.6■■□□□ 1.37
SOD2-209ENST00000535561 KIAA0556O60303 1618 aa23.59■■□□□ 1.37
SOD2-209ENST00000535561 EHMT2Q96KQ7 1210 aa23.57■■□□□ 1.36
SOD2-209ENST00000535561 PTPRGP23470 1445 aa23.57■■□□□ 1.36
SOD2-209ENST00000535561 EFCAB5A4FU69 1503 aa23.56■■□□□ 1.36
SOD2-209ENST00000535561 SAMD9Q5K651 1589 aa23.56■■□□□ 1.36
SOD2-209ENST00000535561 UHRF1BP1LA0JNW5 1464 aa23.43■■□□□ 1.34
SOD2-209ENST00000535561 UACAQ9BZF9 1416 aa23.42■■□□□ 1.34
SOD2-209ENST00000535561 RANGAP1P46060 587 aaPredicted RBP23.42■■□□□ 1.34
SOD2-209ENST00000535561 ARHGAP35Q9NRY4 1499 aa23.42■■□□□ 1.34
SOD2-209ENST00000535561 LOC105371045A0A1W2PR82 267 aa23.41■■□□□ 1.34
SOD2-209ENST00000535561 P3H3Q8IVL6 736 aa23.4■■□□□ 1.34
SOD2-209ENST00000535561 CLIP1P30622 1438 aa23.4■■□□□ 1.34
SOD2-209ENST00000535561 FHOD3Q2V2M9 1422 aa23.39■■□□□ 1.33
SOD2-209ENST00000535561 ABCC2Q92887 1545 aa23.37■■□□□ 1.33
SOD2-209ENST00000535561 TTBK1Q5TCY1 1321 aaPredicted RBP23.36■■□□□ 1.33
SOD2-209ENST00000535561 CEP162Q5TB80 1403 aa23.35■■□□□ 1.33
SOD2-209ENST00000535561 FMN1Q68DA7 1419 aa23.35■■□□□ 1.33
SOD2-209ENST00000535561 ADCY10Q96PN6 1610 aa23.34■■□□□ 1.33
SOD2-209ENST00000535561 ABCA8O94911 1581 aa23.34■■□□□ 1.33
SOD2-209ENST00000535561 NPM1P06748 294 aaKnown RBP eCLIP23.33■■□□□ 1.33
SOD2-209ENST00000535561 PLB1Q6P1J6 1458 aa23.32■■□□□ 1.32
SOD2-209ENST00000535561 KDM5BQ9UGL1 1544 aa23.28■■□□□ 1.32
SOD2-209ENST00000535561 RAPGEF6Q8TEU7 1601 aa23.25■■□□□ 1.31
SOD2-209ENST00000535561 MAPKBP1O60336 1514 aa23.23■■□□□ 1.31
SOD2-209ENST00000535561 NUP153P49790 1475 aaKnown RBP23.19■■□□□ 1.3
SOD2-209ENST00000535561 CASKIN1Q8WXD9 1431 aa23.18■■□□□ 1.3
SOD2-209ENST00000535561 ATP10BO94823 1461 aa23.15■■□□□ 1.3
SOD2-209ENST00000535561 ZCCHC11Q5TAX3 1644 aaKnown RBP23.15■■□□□ 1.3
SOD2-209ENST00000535561 HECW1Q76N89 1606 aa23.15■■□□□ 1.3
SOD2-209ENST00000535561 FYCO1Q9BQS8 1478 aa23.14■■□□□ 1.29
SOD2-209ENST00000535561 ASXL2Q76L83 1435 aa23.13■■□□□ 1.29
SOD2-209ENST00000535561 EPRSP07814 1512 aaKnown RBP23.08■■□□□ 1.29
SOD2-209ENST00000535561 CCDC18Q5T9S5 1454 aa23.08■■□□□ 1.29
SOD2-209ENST00000535561 PCF11O94913 1555 aaKnown RBP23.08■■□□□ 1.29
SOD2-209ENST00000535561 VPS8Q8N3P4 1428 aa23.08■■□□□ 1.28
SOD2-209ENST00000535561 ABCC10Q5T3U5 1492 aa23.07■■□□□ 1.28
SOD2-209ENST00000535561 WDR7Q9Y4E6 1490 aa23.07■■□□□ 1.28
SOD2-209ENST00000535561 ATP1B4Q9UN42 357 aaPredicted RBP23.05■■□□□ 1.28
SOD2-209ENST00000535561 CDK11AQ9UQ88 783 aaPredicted RBP23.05■■□□□ 1.28
SOD2-209ENST00000535561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.03■■□□□ 1.28
SOD2-209ENST00000535561 HNRNPUL2Q1KMD3 747 aaKnown RBP23.03■■□□□ 1.28
SOD2-209ENST00000535561 PLEKHD1A6NEE1 506 aa23.02■■□□□ 1.28
SOD2-209ENST00000535561 ARID3CA6NKF2 412 aa23.02■■□□□ 1.28
SOD2-209ENST00000535561 TRHP20396 242 aaPredicted RBP23.01■■□□□ 1.27
SOD2-209ENST00000535561 CDK13Q14004 1512 aaKnown RBP22.99■■□□□ 1.27
SOD2-209ENST00000535561 GLI2P10070 1586 aa22.99■■□□□ 1.27
SOD2-209ENST00000535561 DIP2BQ9P265 1576 aa22.99■■□□□ 1.27
SOD2-209ENST00000535561 FAM69CQ0P6D2 419 aa22.97■■□□□ 1.27
SOD2-209ENST00000535561 TROQ12816 1431 aaPredicted RBP22.91■■□□□ 1.26
SOD2-209ENST00000535561 MAP3K1Q13233 1512 aa22.91■■□□□ 1.26
SOD2-209ENST00000535561 KCNH8Q96L42 1107 aa22.9■■□□□ 1.26
SOD2-209ENST00000535561 LRRIQ1Q96JM4 1722 aa22.89■■□□□ 1.26
SOD2-209ENST00000535561 KIF13AQ9H1H9 1805 aa22.88■■□□□ 1.25
SOD2-209ENST00000535561 ABCA9Q8IUA7 1624 aa22.84■■□□□ 1.25
SOD2-209ENST00000535561 MAP3K4Q9Y6R4 1608 aa22.83■■□□□ 1.25
SOD2-209ENST00000535561 APLP2Q06481 763 aa22.83■■□□□ 1.25
SOD2-209ENST00000535561 TIAM1Q13009 1591 aa22.83■■□□□ 1.25
SOD2-209ENST00000535561 CD109Q6YHK3 1445 aa22.82■■□□□ 1.24
SOD2-209ENST00000535561 CFAP43Q8NDM7 1665 aa22.82■■□□□ 1.24
SOD2-209ENST00000535561 MTUS2Q5JR59 1369 aa22.82■■□□□ 1.24
SOD2-209ENST00000535561 KIF14Q15058 1648 aa22.81■■□□□ 1.24
SOD2-209ENST00000535561 MAGI3Q5TCQ9 1506 aa22.8■■□□□ 1.24
SOD2-209ENST00000535561 TEX14Q8IWB6 1497 aa22.79■■□□□ 1.24
SOD2-209ENST00000535561 EHBP1L1Q8N3D4 1523 aa22.79■■□□□ 1.24
SOD2-209ENST00000535561 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.78■■□□□ 1.24
SOD2-209ENST00000535561 LRRC9Q6ZRR7 1453 aa22.75■■□□□ 1.23
SOD2-209ENST00000535561 PHLDB1Q86UU1 1377 aa22.74■■□□□ 1.23
SOD2-209ENST00000535561 ARAP3Q8WWN8 1544 aa22.72■■□□□ 1.23
SOD2-209ENST00000535561 TTC37Q6PGP7 1564 aa22.72■■□□□ 1.23
SOD2-209ENST00000535561 PLCH2O75038 1416 aa22.72■■□□□ 1.23
SOD2-209ENST00000535561 PPRC1Q5VV67 1664 aaKnown RBP22.68■■□□□ 1.22
SOD2-209ENST00000535561 NEO1Q92859 1461 aa22.68■■□□□ 1.22
SOD2-209ENST00000535561 CCNB3Q8WWL7 1395 aa22.65■■□□□ 1.22
SOD2-209ENST00000535561 KANK4Q5T7N3 995 aaPredicted RBP22.65■■□□□ 1.22
SOD2-209ENST00000535561 EFCAB2Q5VUJ9 269 aa22.64■■□□□ 1.21
SOD2-209ENST00000535561 SUPT6HQ7KZ85 1726 aaKnown RBP22.64■■□□□ 1.21
SOD2-209ENST00000535561 NCOA2Q15596 1464 aa22.64■■□□□ 1.21
SOD2-209ENST00000535561 CFAP74Q9C0B2 1584 aa22.63■■□□□ 1.21
SOD2-209ENST00000535561 TSPOAP1O95153 1857 aa22.63■■□□□ 1.21
SOD2-209ENST00000535561 FANCAO15360 1455 aa22.63■■□□□ 1.21
SOD2-209ENST00000535561 MYO5CQ9NQX4 1742 aa22.62■■□□□ 1.21
SOD2-209ENST00000535561 GPATCH8Q9UKJ3 1502 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms