RNA–Protein interactions for RNA: ENST00000535318.6

CPNE2-202, Transcript of copine 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE2, Length 2,316 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-202ENST00000535318 ABCA5Q8WWZ7 1642 aa33.47■■■□□ 2.95
CPNE2-202ENST00000535318 MRC2Q9UBG0 1479 aa33.46■■■□□ 2.95
CPNE2-202ENST00000535318 CLSPNQ9HAW4 1339 aa33.45■■■□□ 2.95
CPNE2-202ENST00000535318 TDRD9Q8NDG6 1382 aaKnown RBP33.45■■■□□ 2.95
CPNE2-202ENST00000535318 CUL7Q14999 1698 aa33.44■■■□□ 2.94
CPNE2-202ENST00000535318 CCNB3Q8WWL7 1395 aa33.44■■■□□ 2.94
CPNE2-202ENST00000535318 TARBP1Q13395 1621 aaKnown RBP33.42■■■□□ 2.94
CPNE2-202ENST00000535318 MIER1Q8N108 512 aa33.39■■■□□ 2.94
CPNE2-202ENST00000535318 GAPVD1Q14C86 1478 aa33.39■■■□□ 2.94
CPNE2-202ENST00000535318 TIAM1Q13009 1591 aa33.34■■■□□ 2.93
CPNE2-202ENST00000535318 ITGAEP38570 1179 aa33.34■■■□□ 2.93
CPNE2-202ENST00000535318 GTF3C3Q9Y5Q9 886 aa33.33■■■□□ 2.93
CPNE2-202ENST00000535318 MAP3K1Q13233 1512 aa33.3■■■□□ 2.92
CPNE2-202ENST00000535318 WDR62O43379 1518 aa33.27■■■□□ 2.92
CPNE2-202ENST00000535318 YTHDC1Q96MU7 727 aaKnown RBP33.27■■■□□ 2.92
CPNE2-202ENST00000535318 P3H3Q8IVL6 736 aa33.26■■■□□ 2.91
CPNE2-202ENST00000535318 LRRC9Q6ZRR7 1453 aa33.22■■■□□ 2.91
CPNE2-202ENST00000535318 FHAD1B1AJZ9 1412 aa33.19■■■□□ 2.9
CPNE2-202ENST00000535318 CTTNBP2Q8WZ74 1663 aa33.18■■■□□ 2.9
CPNE2-202ENST00000535318 ERCC6Q03468 1493 aa33.17■■■□□ 2.9
CPNE2-202ENST00000535318 PHLDB1Q86UU1 1377 aa33.15■■■□□ 2.9
CPNE2-202ENST00000535318 AQRO60306 1485 aaKnown RBP eCLIP33.14■■■□□ 2.9
CPNE2-202ENST00000535318 PCF11O94913 1555 aaKnown RBP33.14■■■□□ 2.9
CPNE2-202ENST00000535318 PBRM1Q86U86 1689 aa33.14■■■□□ 2.9
CPNE2-202ENST00000535318 RAB3GAP2Q9H2M9 1393 aa33.13■■■□□ 2.89
CPNE2-202ENST00000535318 ATP1B4Q9UN42 357 aaPredicted RBP33.12■■■□□ 2.89
CPNE2-202ENST00000535318 IFT140Q96RY7 1462 aa33.12■■■□□ 2.89
CPNE2-202ENST00000535318 FHOD3Q2V2M9 1422 aa33.11■■■□□ 2.89
CPNE2-202ENST00000535318 CFAP43Q8NDM7 1665 aa33.08■■■□□ 2.89
CPNE2-202ENST00000535318 THOC2Q8NI27 1593 aaKnown RBP33.07■■■□□ 2.88
CPNE2-202ENST00000535318 ZNF608Q9ULD9 1512 aaPredicted RBP33.05■■■□□ 2.88
CPNE2-202ENST00000535318 EFCAB5A4FU69 1503 aa33.05■■■□□ 2.88
CPNE2-202ENST00000535318 PELP1Q8IZL8 1130 aaKnown RBP33.05■■■□□ 2.88
CPNE2-202ENST00000535318 FAM50AQ14320 339 aaKnown RBP33.02■■■□□ 2.88
CPNE2-202ENST00000535318 GRIN2BQ13224 1484 aa33.01■■■□□ 2.88
CPNE2-202ENST00000535318 SETD5Q9C0A6 1442 aa33■■■□□ 2.87
CPNE2-202ENST00000535318 ADAMTS12P58397 1594 aa32.99■■■□□ 2.87
CPNE2-202ENST00000535318 MAPKBP1O60336 1514 aa32.98■■■□□ 2.87
CPNE2-202ENST00000535318 FYCO1Q9BQS8 1478 aa32.97■■■□□ 2.87
CPNE2-202ENST00000535318 CASKIN1Q8WXD9 1431 aa32.96■■■□□ 2.87
CPNE2-202ENST00000535318 SAMD9Q5K651 1589 aa32.89■■■□□ 2.86
CPNE2-202ENST00000535318 EIF4G3O43432 1585 aaKnown RBP32.88■■■□□ 2.85
CPNE2-202ENST00000535318 FMN1Q68DA7 1419 aa32.83■■■□□ 2.85
CPNE2-202ENST00000535318 SNAPC4Q5SXM2 1469 aa32.79■■■□□ 2.84
CPNE2-202ENST00000535318 SIN3AQ96ST3 1273 aa32.76■■■□□ 2.83
CPNE2-202ENST00000535318 IQGAP2Q13576 1575 aa32.74■■■□□ 2.83
CPNE2-202ENST00000535318 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.73■■■□□ 2.83
CPNE2-202ENST00000535318 FGD6Q6ZV73 1430 aa32.69■■■□□ 2.82
CPNE2-202ENST00000535318 MTUS2Q5JR59 1369 aa32.68■■■□□ 2.82
CPNE2-202ENST00000535318 GRIN2AQ12879 1464 aa32.65■■■□□ 2.82
CPNE2-202ENST00000535318 MAGI1Q96QZ7 1491 aaPredicted RBP32.65■■■□□ 2.82
CPNE2-202ENST00000535318 LRRIQ1Q96JM4 1722 aa32.65■■■□□ 2.82
CPNE2-202ENST00000535318 KIAA0586Q9BVV6 1533 aa32.58■■■□□ 2.81
CPNE2-202ENST00000535318 UGGT2Q9NYU1 1516 aa32.58■■■□□ 2.81
CPNE2-202ENST00000535318 SYNJ2O15056 1496 aa32.55■■■□□ 2.8
CPNE2-202ENST00000535318 PTPRKQ15262 1439 aa32.55■■■□□ 2.8
CPNE2-202ENST00000535318 NCOA2Q15596 1464 aa32.54■■■□□ 2.8
CPNE2-202ENST00000535318 TIMELESSQ9UNS1 1208 aa32.51■■■□□ 2.79
CPNE2-202ENST00000535318 CHMP7Q8WUX9 453 aaPredicted RBP32.49■■■□□ 2.79
CPNE2-202ENST00000535318 MYOM3Q5VTT5 1437 aa32.49■■■□□ 2.79
CPNE2-202ENST00000535318 CCDC18Q5T9S5 1454 aa32.47■■■□□ 2.79
CPNE2-202ENST00000535318 CEP170Q5SW79 1584 aa32.46■■■□□ 2.79
CPNE2-202ENST00000535318 HFM1A2PYH4 1435 aa32.45■■■□□ 2.79
CPNE2-202ENST00000535318 PPP1R15AO75807 674 aaPredicted RBP32.44■■■□□ 2.78
CPNE2-202ENST00000535318 SUPT6HQ7KZ85 1726 aaKnown RBP32.44■■■□□ 2.78
CPNE2-202ENST00000535318 DISP1Q96F81 1524 aa32.44■■■□□ 2.78
CPNE2-202ENST00000535318 EHBP1L1Q8N3D4 1523 aa32.43■■■□□ 2.78
CPNE2-202ENST00000535318 KIAA0556O60303 1618 aa32.42■■■□□ 2.78
CPNE2-202ENST00000535318 PTPN23Q9H3S7 1636 aa32.41■■■□□ 2.78
CPNE2-202ENST00000535318 MAGI3Q5TCQ9 1506 aa32.41■■■□□ 2.78
CPNE2-202ENST00000535318 FBLN2P98095 1184 aa32.41■■■□□ 2.78
CPNE2-202ENST00000535318 KCNH8Q96L42 1107 aa32.4■■■□□ 2.78
CPNE2-202ENST00000535318 DDX10Q13206 875 aaKnown RBP32.39■■■□□ 2.78
CPNE2-202ENST00000535318 NAIPQ13075 1403 aa32.38■■■□□ 2.77
CPNE2-202ENST00000535318 HECW1Q76N89 1606 aa32.38■■■□□ 2.77
CPNE2-202ENST00000535318 NUP160Q12769 1436 aa32.37■■■□□ 2.77
CPNE2-202ENST00000535318 UACAQ9BZF9 1416 aa32.37■■■□□ 2.77
CPNE2-202ENST00000535318 HIRIP3Q9BW71 556 aaPredicted RBP32.35■■■□□ 2.77
CPNE2-202ENST00000535318 ARHGEF11O15085 1522 aa32.34■■■□□ 2.77
CPNE2-202ENST00000535318 EPRSP07814 1512 aaKnown RBP32.3■■■□□ 2.76
CPNE2-202ENST00000535318 TONSLQ96HA7 1378 aa32.29■■■□□ 2.76
CPNE2-202ENST00000535318 CDK13Q14004 1512 aaKnown RBP32.23■■■□□ 2.75
CPNE2-202ENST00000535318 RRP7BPQ9NSQ0 103 aa32.23■■■□□ 2.75
CPNE2-202ENST00000535318 CHIC2Q9UKJ5 165 aa32.23■■■□□ 2.75
CPNE2-202ENST00000535318 ARID3CA6NKF2 412 aa32.22■■■□□ 2.75
CPNE2-202ENST00000535318 TCOF1Q13428 1488 aaKnown RBP32.21■■■□□ 2.75
CPNE2-202ENST00000535318 JPH4Q96JJ6 628 aa32.19■■■□□ 2.74
CPNE2-202ENST00000535318 SUPT16HQ9Y5B9 1047 aaKnown RBP32.17■■■□□ 2.74
CPNE2-202ENST00000535318 RAPGEF6Q8TEU7 1601 aa32.16■■■□□ 2.74
CPNE2-202ENST00000535318 NUP153P49790 1475 aaKnown RBP32.15■■■□□ 2.74
CPNE2-202ENST00000535318 CARMIL2Q6F5E8 1435 aa32.12■■■□□ 2.73
CPNE2-202ENST00000535318 GCC2Q8IWJ2 1684 aa32.08■■■□□ 2.73
CPNE2-202ENST00000535318 KDM5BQ9UGL1 1544 aa32.07■■■□□ 2.72
CPNE2-202ENST00000535318 CHD1O14646 1710 aa32.07■■■□□ 2.72
CPNE2-202ENST00000535318 MIA2Q96PC5 1412 aa32.07■■■□□ 2.72
CPNE2-202ENST00000535318 KDM6BO15054 1643 aa32.06■■■□□ 2.72
CPNE2-202ENST00000535318 TRIM52Q96A61 297 aa32.05■■■□□ 2.72
CPNE2-202ENST00000535318 DENND4BO75064 1496 aaPredicted RBP32.05■■■□□ 2.72
CPNE2-202ENST00000535318 PLB1Q6P1J6 1458 aa32.05■■■□□ 2.72
CPNE2-202ENST00000535318 AKNAQ7Z591 1439 aa32.02■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms