RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 JPH4Q96JJ6 628 aa32.12■■■□□ 2.73
CTSB-233ENST00000534636 IGF1RP08069 1367 aa32.07■■■□□ 2.73
CTSB-233ENST00000534636 KIAA0586Q9BVV6 1533 aa32■■■□□ 2.71
CTSB-233ENST00000534636 CARMIL1Q5VZK9 1371 aa31.92■■■□□ 2.7
CTSB-233ENST00000534636 KIF13AQ9H1H9 1805 aa31.84■■■□□ 2.69
CTSB-233ENST00000534636 NPM1P06748 294 aaKnown RBP eCLIP31.84■■■□□ 2.69
CTSB-233ENST00000534636 ADCY10Q96PN6 1610 aa31.81■■■□□ 2.68
CTSB-233ENST00000534636 IQGAP2Q13576 1575 aa31.77■■■□□ 2.68
CTSB-233ENST00000534636 MAPKBP1O60336 1514 aa31.76■■■□□ 2.68
CTSB-233ENST00000534636 CARMIL2Q6F5E8 1435 aa31.74■■■□□ 2.67
CTSB-233ENST00000534636 ABCC10Q5T3U5 1492 aa31.69■■■□□ 2.66
CTSB-233ENST00000534636 PTPRGP23470 1445 aa31.68■■■□□ 2.66
CTSB-233ENST00000534636 RAPGEF2Q9Y4G8 1499 aa31.67■■■□□ 2.66
CTSB-233ENST00000534636 FAM69CQ0P6D2 419 aa31.65■■■□□ 2.66
CTSB-233ENST00000534636 TNIKQ9UKE5 1360 aa31.65■■■□□ 2.66
CTSB-233ENST00000534636 DIP2BQ9P265 1576 aa31.64■■■□□ 2.66
CTSB-233ENST00000534636 TTBK1Q5TCY1 1321 aaPredicted RBP31.62■■■□□ 2.65
CTSB-233ENST00000534636 AEBP2Q6ZN18 517 aaPredicted RBP31.55■■■□□ 2.64
CTSB-233ENST00000534636 DISP1Q96F81 1524 aa31.53■■■□□ 2.64
CTSB-233ENST00000534636 ABCC2Q92887 1545 aa31.52■■■□□ 2.64
CTSB-233ENST00000534636 UGGT2Q9NYU1 1516 aa31.52■■■□□ 2.64
CTSB-233ENST00000534636 CTTNBP2Q8WZ74 1663 aa31.49■■■□□ 2.63
CTSB-233ENST00000534636 TSPOAP1O95153 1857 aa31.47■■■□□ 2.63
CTSB-233ENST00000534636 UHRF1BP1LA0JNW5 1464 aa31.46■■■□□ 2.63
CTSB-233ENST00000534636 KIAA0556O60303 1618 aa31.46■■■□□ 2.63
CTSB-233ENST00000534636 UACAQ9BZF9 1416 aa31.45■■■□□ 2.63
CTSB-233ENST00000534636 PLB1Q6P1J6 1458 aa31.4■■■□□ 2.62
CTSB-233ENST00000534636 ASXL2Q76L83 1435 aa31.39■■■□□ 2.62
CTSB-233ENST00000534636 KDM6BO15054 1643 aa31.38■■■□□ 2.61
CTSB-233ENST00000534636 GOLGA3Q08378 1498 aa31.33■■■□□ 2.61
CTSB-233ENST00000534636 PRXQ9BXM0 1461 aa31.33■■■□□ 2.61
CTSB-233ENST00000534636 KDM5BQ9UGL1 1544 aa31.31■■■□□ 2.6
CTSB-233ENST00000534636 GLI2P10070 1586 aa31.3■■■□□ 2.6
CTSB-233ENST00000534636 ZCCHC11Q5TAX3 1644 aaKnown RBP31.29■■■□□ 2.6
CTSB-233ENST00000534636 PPRC1Q5VV67 1664 aaKnown RBP31.19■■■□□ 2.58
CTSB-233ENST00000534636 EPRSP07814 1512 aaKnown RBP31.19■■■□□ 2.58
CTSB-233ENST00000534636 MAP3K4Q9Y6R4 1608 aa31.16■■■□□ 2.58
CTSB-233ENST00000534636 WDR7Q9Y4E6 1490 aa31.14■■■□□ 2.57
CTSB-233ENST00000534636 ABCA8O94911 1581 aa31.13■■■□□ 2.57
CTSB-233ENST00000534636 FAM9AQ8IZU1 332 aaPredicted RBP31.11■■■□□ 2.57
CTSB-233ENST00000534636 TEX14Q8IWB6 1497 aa31.1■■■□□ 2.57
CTSB-233ENST00000534636 CSRNP3Q8WYN3 585 aa31.1■■■□□ 2.57
CTSB-233ENST00000534636 EEA1Q15075 1411 aa31.08■■■□□ 2.57
CTSB-233ENST00000534636 CFAP43Q8NDM7 1665 aa30.98■■■□□ 2.55
CTSB-233ENST00000534636 SAMD9Q5K651 1589 aa30.97■■■□□ 2.55
CTSB-233ENST00000534636 P3H3Q8IVL6 736 aa30.96■■■□□ 2.55
CTSB-233ENST00000534636 KCNH8Q96L42 1107 aa30.92■■■□□ 2.54
CTSB-233ENST00000534636 CD109Q6YHK3 1445 aa30.9■■■□□ 2.54
CTSB-233ENST00000534636 COL17A1Q9UMD9 1497 aaPredicted RBP30.89■■■□□ 2.53
CTSB-233ENST00000534636 MAGI3Q5TCQ9 1506 aa30.88■■■□□ 2.53
CTSB-233ENST00000534636 KDM4FA0A1W2PPD8 638 aa30.87■■■□□ 2.53
CTSB-233ENST00000534636 RAPGEF6Q8TEU7 1601 aa30.87■■■□□ 2.53
CTSB-233ENST00000534636 ARID3CA6NKF2 412 aa30.86■■■□□ 2.53
CTSB-233ENST00000534636 ATP10BO94823 1461 aa30.83■■■□□ 2.53
CTSB-233ENST00000534636 KIF21BO75037 1637 aa30.83■■■□□ 2.53
CTSB-233ENST00000534636 RANGAP1P46060 587 aaPredicted RBP30.8■■■□□ 2.52
CTSB-233ENST00000534636 ADGRL1O94910 1474 aa30.76■■■□□ 2.51
CTSB-233ENST00000534636 FHOD3Q2V2M9 1422 aa30.75■■■□□ 2.51
CTSB-233ENST00000534636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.74■■■□□ 2.51
CTSB-233ENST00000534636 HNRNPUL2Q1KMD3 747 aaKnown RBP30.74■■■□□ 2.51
CTSB-233ENST00000534636 EFCAB5A4FU69 1503 aa30.73■■■□□ 2.51
CTSB-233ENST00000534636 ABCA9Q8IUA7 1624 aa30.73■■■□□ 2.51
CTSB-233ENST00000534636 NUP153P49790 1475 aaKnown RBP30.7■■■□□ 2.5
CTSB-233ENST00000534636 ARAP3Q8WWN8 1544 aa30.63■■■□□ 2.49
CTSB-233ENST00000534636 PHLDB1Q86UU1 1377 aa30.61■■■□□ 2.49
CTSB-233ENST00000534636 CHIC1Q5VXU3 224 aa30.57■■■□□ 2.48
CTSB-233ENST00000534636 UBTFP17480 764 aaKnown RBP30.56■■■□□ 2.48
CTSB-233ENST00000534636 NEO1Q92859 1461 aa30.56■■■□□ 2.48
CTSB-233ENST00000534636 PLEKHD1A6NEE1 506 aa30.54■■■□□ 2.48
CTSB-233ENST00000534636 EHMT2Q96KQ7 1210 aa30.53■■■□□ 2.48
CTSB-233ENST00000534636 CFAP74Q9C0B2 1584 aa30.45■■■□□ 2.47
CTSB-233ENST00000534636 FMN1Q68DA7 1419 aa30.45■■■□□ 2.46
CTSB-233ENST00000534636 HECW1Q76N89 1606 aa30.43■■■□□ 2.46
CTSB-233ENST00000534636 CDK13Q14004 1512 aaKnown RBP30.42■■■□□ 2.46
CTSB-233ENST00000534636 RAPGEF3O95398 923 aa30.41■■■□□ 2.46
CTSB-233ENST00000534636 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.41■■■□□ 2.465e-6■□□□□ 9.5
CTSB-233ENST00000534636 ARHGAP35Q9NRY4 1499 aa30.39■■■□□ 2.46
CTSB-233ENST00000534636 TTC37Q6PGP7 1564 aa30.39■■■□□ 2.46
CTSB-233ENST00000534636 FRMPD1Q5SYB0 1578 aa30.38■■■□□ 2.45
CTSB-233ENST00000534636 FANCAO15360 1455 aa30.37■■■□□ 2.45
CTSB-233ENST00000534636 ATP1B4Q9UN42 357 aaPredicted RBP30.36■■■□□ 2.45
CTSB-233ENST00000534636 DENND4BO75064 1496 aaPredicted RBP30.33■■■□□ 2.45
CTSB-233ENST00000534636 AKNAQ7Z591 1439 aa30.33■■■□□ 2.45
CTSB-233ENST00000534636 HECW2Q9P2P5 1572 aa30.32■■■□□ 2.44
CTSB-233ENST00000534636 RICTORQ6R327 1708 aa30.31■■■□□ 2.44
CTSB-233ENST00000534636 ARHGEF40Q8TER5 1519 aa30.28■■■□□ 2.44
CTSB-233ENST00000534636 CDK11AQ9UQ88 783 aaPredicted RBP30.28■■■□□ 2.44
CTSB-233ENST00000534636 MYO5CQ9NQX4 1742 aa30.24■■■□□ 2.43
CTSB-233ENST00000534636 ADAMTSL3P82987 1691 aa30.23■■■□□ 2.43
CTSB-233ENST00000534636 ARID4BQ4LE39 1312 aaPredicted RBP30.23■■■□□ 2.43
CTSB-233ENST00000534636 KIF14Q15058 1648 aa30.23■■■□□ 2.43
CTSB-233ENST00000534636 BCORL1Q5H9F3 1711 aa30.22■■■□□ 2.43
CTSB-233ENST00000534636 ZMYM4Q5VZL5 1548 aa30.21■■■□□ 2.43
CTSB-233ENST00000534636 PLCH2O75038 1416 aa30.21■■■□□ 2.43
CTSB-233ENST00000534636 CLIP1P30622 1438 aa30.19■■■□□ 2.42
CTSB-233ENST00000534636 LRRIQ1Q96JM4 1722 aa30.16■■■□□ 2.42
CTSB-233ENST00000534636 TROQ12816 1431 aaPredicted RBP30.16■■■□□ 2.42
CTSB-233ENST00000534636 PTPRMP28827 1452 aa30.16■■■□□ 2.42
CTSB-233ENST00000534636 ZFYVE16Q7Z3T8 1539 aa30.16■■■□□ 2.42
CTSB-233ENST00000534636 MADDQ8WXG6 1647 aa30.14■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms