RNA–Protein interactions for RNA: ENST00000534555.5

RPS3-220, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-220ENST00000534555 FAM69CQ0P6D2 419 aa28.35■■■□□ 2.13
RPS3-220ENST00000534555 RUSC2Q8N2Y8 1516 aa28.33■■■□□ 2.13
RPS3-220ENST00000534555 NPM1P06748 294 aaKnown RBP eCLIP28.31■■■□□ 2.123e-45■□□□□ 8.2
RPS3-220ENST00000534555 ABCC10Q5T3U5 1492 aa28.29■■■□□ 2.12
RPS3-220ENST00000534555 ADCY10Q96PN6 1610 aa28.23■■■□□ 2.11
RPS3-220ENST00000534555 MAPKBP1O60336 1514 aa28.22■■■□□ 2.11
RPS3-220ENST00000534555 DIP2BQ9P265 1576 aa28.2■■■□□ 2.11
RPS3-220ENST00000534555 IGF1RP08069 1367 aa28.16■■■□□ 2.1
RPS3-220ENST00000534555 KIAA0586Q9BVV6 1533 aa28.15■■■□□ 2.1
RPS3-220ENST00000534555 TSPOAP1O95153 1857 aa28.08■■■□□ 2.09
RPS3-220ENST00000534555 KDM4FA0A1W2PPD8 638 aa28.07■■■□□ 2.08
RPS3-220ENST00000534555 KDM6BO15054 1643 aa28.07■■■□□ 2.08
RPS3-220ENST00000534555 TTBK1Q5TCY1 1321 aaPredicted RBP28.06■■■□□ 2.08
RPS3-220ENST00000534555 KIF27Q86VH2 1401 aa28.06■■■□□ 2.08
RPS3-220ENST00000534555 CUL7Q14999 1698 aa28.03■■■□□ 2.08
RPS3-220ENST00000534555 PTPRGP23470 1445 aa28.01■■■□□ 2.08
RPS3-220ENST00000534555 CARMIL1Q5VZK9 1371 aa27.95■■■□□ 2.06
RPS3-220ENST00000534555 TNIKQ9UKE5 1360 aa27.91■■■□□ 2.06
RPS3-220ENST00000534555 ABCC2Q92887 1545 aa27.88■■■□□ 2.05
RPS3-220ENST00000534555 CARMIL2Q6F5E8 1435 aa27.88■■■□□ 2.05
RPS3-220ENST00000534555 ASXL2Q76L83 1435 aa27.86■■■□□ 2.05
RPS3-220ENST00000534555 IQGAP2Q13576 1575 aa27.82■■■□□ 2.04
RPS3-220ENST00000534555 PPRC1Q5VV67 1664 aaKnown RBP27.81■■■□□ 2.04
RPS3-220ENST00000534555 PLB1Q6P1J6 1458 aa27.81■■■□□ 2.04
RPS3-220ENST00000534555 GLI2P10070 1586 aa27.78■■■□□ 2.04
RPS3-220ENST00000534555 UHRF1BP1LA0JNW5 1464 aa27.76■■■□□ 2.04
RPS3-220ENST00000534555 UACAQ9BZF9 1416 aa27.76■■■□□ 2.04
RPS3-220ENST00000534555 DISP1Q96F81 1524 aa27.76■■■□□ 2.03
RPS3-220ENST00000534555 COL17A1Q9UMD9 1497 aaPredicted RBP27.71■■■□□ 2.03
RPS3-220ENST00000534555 EPRSP07814 1512 aaKnown RBP27.68■■■□□ 2.02
RPS3-220ENST00000534555 ADGRL1O94910 1474 aa27.68■■■□□ 2.02
RPS3-220ENST00000534555 KDM5BQ9UGL1 1544 aa27.67■■■□□ 2.02
RPS3-220ENST00000534555 ILDR1Q86SU0 546 aaPredicted RBP27.64■■■□□ 2.02
RPS3-220ENST00000534555 MAP3K4Q9Y6R4 1608 aa27.63■■■□□ 2.01
RPS3-220ENST00000534555 UGGT2Q9NYU1 1516 aa27.62■■■□□ 2.01
RPS3-220ENST00000534555 ZCCHC11Q5TAX3 1644 aaKnown RBP27.62■■■□□ 2.01
RPS3-220ENST00000534555 RAPGEF2Q9Y4G8 1499 aa27.62■■■□□ 2.01
RPS3-220ENST00000534555 KIAA0556O60303 1618 aa27.58■■■□□ 2.01
RPS3-220ENST00000534555 TEX14Q8IWB6 1497 aa27.56■■■□□ 2
RPS3-220ENST00000534555 WDR7Q9Y4E6 1490 aa27.49■■□□□ 1.99
RPS3-220ENST00000534555 KCNH8Q96L42 1107 aa27.44■■□□□ 1.98
RPS3-220ENST00000534555 HECW2Q9P2P5 1572 aa27.43■■□□□ 1.98
RPS3-220ENST00000534555 CD109Q6YHK3 1445 aa27.4■■□□□ 1.98
RPS3-220ENST00000534555 CTTNBP2Q8WZ74 1663 aa27.39■■□□□ 1.97
RPS3-220ENST00000534555 ABCA8O94911 1581 aa27.36■■□□□ 1.97
RPS3-220ENST00000534555 MAGI3Q5TCQ9 1506 aa27.36■■□□□ 1.97
RPS3-220ENST00000534555 GOLGA3Q08378 1498 aa27.34■■□□□ 1.97
RPS3-220ENST00000534555 CFAP43Q8NDM7 1665 aa27.33■■□□□ 1.97
RPS3-220ENST00000534555 ARID3CA6NKF2 412 aa27.28■■□□□ 1.96
RPS3-220ENST00000534555 P3H3Q8IVL6 736 aa27.24■■□□□ 1.95
RPS3-220ENST00000534555 PRXQ9BXM0 1461 aa27.23■■□□□ 1.95
RPS3-220ENST00000534555 KIF21BO75037 1637 aa27.23■■□□□ 1.95
RPS3-220ENST00000534555 ATP10BO94823 1461 aa27.18■■□□□ 1.94
RPS3-220ENST00000534555 ARAP3Q8WWN8 1544 aa27.16■■□□□ 1.94
RPS3-220ENST00000534555 FAM9AQ8IZU1 332 aaPredicted RBP27.1■■□□□ 1.93
RPS3-220ENST00000534555 RAPGEF3O95398 923 aa27.08■■□□□ 1.93
RPS3-220ENST00000534555 ABCA9Q8IUA7 1624 aa27.07■■□□□ 1.92
RPS3-220ENST00000534555 PTPRMP28827 1452 aa27.02■■□□□ 1.92
RPS3-220ENST00000534555 PHLDB1Q86UU1 1377 aa27.02■■□□□ 1.92
RPS3-220ENST00000534555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.02■■□□□ 1.92
RPS3-220ENST00000534555 HNRNPUL2Q1KMD3 747 aaKnown RBP27.02■■□□□ 1.92
RPS3-220ENST00000534555 ADAMTSL3P82987 1691 aa27.01■■□□□ 1.92
RPS3-220ENST00000534555 RAPGEF6Q8TEU7 1601 aa26.98■■□□□ 1.91
RPS3-220ENST00000534555 SAMD9Q5K651 1589 aa26.98■■□□□ 1.91
RPS3-220ENST00000534555 NEO1Q92859 1461 aa26.96■■□□□ 1.91
RPS3-220ENST00000534555 CSRNP3Q8WYN3 585 aa26.96■■□□□ 1.91
RPS3-220ENST00000534555 RANGAP1P46060 587 aaPredicted RBP26.95■■□□□ 1.9
RPS3-220ENST00000534555 FBXO41Q8TF61 875 aa26.94■■□□□ 1.9
RPS3-220ENST00000534555 ARID4BQ4LE39 1312 aaPredicted RBP26.93■■□□□ 1.9
RPS3-220ENST00000534555 FRMPD1Q5SYB0 1578 aa26.93■■□□□ 1.9
RPS3-220ENST00000534555 BCORL1Q5H9F3 1711 aa26.91■■□□□ 1.9
RPS3-220ENST00000534555 NUP153P49790 1475 aaKnown RBP26.9■■□□□ 1.9
RPS3-220ENST00000534555 MADDQ8WXG6 1647 aa26.89■■□□□ 1.9
RPS3-220ENST00000534555 FHOD3Q2V2M9 1422 aa26.86■■□□□ 1.89
RPS3-220ENST00000534555 PLEKHD1A6NEE1 506 aa26.82■■□□□ 1.88
RPS3-220ENST00000534555 PCF11O94913 1555 aaKnown RBP26.81■■□□□ 1.88
RPS3-220ENST00000534555 DENND4BO75064 1496 aaPredicted RBP26.81■■□□□ 1.88
RPS3-220ENST00000534555 LMTK3Q96Q04 1460 aa26.81■■□□□ 1.88
RPS3-220ENST00000534555 AKNAQ7Z591 1439 aa26.8■■□□□ 1.88
RPS3-220ENST00000534555 RIMS1Q86UR5 1692 aaKnown RBP26.79■■□□□ 1.88
RPS3-220ENST00000534555 PLPPR3Q6T4P5 718 aa26.78■■□□□ 1.88
RPS3-220ENST00000534555 ARHGEF40Q8TER5 1519 aa26.78■■□□□ 1.88
RPS3-220ENST00000534555 RICTORQ6R327 1708 aa26.78■■□□□ 1.88
RPS3-220ENST00000534555 FANCAO15360 1455 aa26.75■■□□□ 1.87
RPS3-220ENST00000534555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.75■■□□□ 1.873e-53■□□□□ 10.1
RPS3-220ENST00000534555 HSPA2P54652 639 aa26.73■■□□□ 1.87
RPS3-220ENST00000534555 TTC37Q6PGP7 1564 aa26.69■■□□□ 1.86
RPS3-220ENST00000534555 SIGLEC1Q9BZZ2 1709 aa26.69■■□□□ 1.86
RPS3-220ENST00000534555 YEATS2Q9ULM3 1422 aa26.69■■□□□ 1.86
RPS3-220ENST00000534555 CFAP74Q9C0B2 1584 aa26.67■■□□□ 1.86
RPS3-220ENST00000534555 EEA1Q15075 1411 aa26.66■■□□□ 1.86
RPS3-220ENST00000534555 MLECQ14165 292 aa26.66■■□□□ 1.86
RPS3-220ENST00000534555 ZMYM4Q5VZL5 1548 aa26.65■■□□□ 1.86
RPS3-220ENST00000534555 ZFYVE16Q7Z3T8 1539 aa26.65■■□□□ 1.86
RPS3-220ENST00000534555 POGZQ7Z3K3 1410 aa26.65■■□□□ 1.86
RPS3-220ENST00000534555 CDK13Q14004 1512 aaKnown RBP26.63■■□□□ 1.85
RPS3-220ENST00000534555 HECW1Q76N89 1606 aa26.61■■□□□ 1.85
RPS3-220ENST00000534555 EFCAB5A4FU69 1503 aa26.61■■□□□ 1.85
RPS3-220ENST00000534555 SCAPERQ9BY12 1400 aa26.59■■□□□ 1.85
RPS3-220ENST00000534555 MAGI2Q86UL8 1455 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms