RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 PRG4Q92954 1404 aaPredicted RBP39.99■■■■□ 3.99
YIF1A-213ENST00000534374 CARMIL1Q5VZK9 1371 aa39.97■■■■□ 3.99
YIF1A-213ENST00000534374 RUSC2Q8N2Y8 1516 aa39.93■■■■□ 3.98
YIF1A-213ENST00000534374 KIAA0586Q9BVV6 1533 aa39.92■■■■□ 3.98
YIF1A-213ENST00000534374 RAPGEF2Q9Y4G8 1499 aa39.63■■■■□ 3.94
YIF1A-213ENST00000534374 NPM1P06748 294 aaKnown RBP eCLIP39.53■■■■□ 3.92
YIF1A-213ENST00000534374 CARMIL2Q6F5E8 1435 aa39.52■■■■□ 3.92
YIF1A-213ENST00000534374 IQGAP2Q13576 1575 aa39.51■■■■□ 3.92
YIF1A-213ENST00000534374 PTPRGP23470 1445 aa39.48■■■■□ 3.91
YIF1A-213ENST00000534374 TNIKQ9UKE5 1360 aa39.45■■■■□ 3.91
YIF1A-213ENST00000534374 ADCY10Q96PN6 1610 aa39.39■■■■□ 3.9
YIF1A-213ENST00000534374 PRXQ9BXM0 1461 aa39.35■■■■□ 3.89
YIF1A-213ENST00000534374 UGGT2Q9NYU1 1516 aa39.34■■■■□ 3.89
YIF1A-213ENST00000534374 DISP1Q96F81 1524 aa39.33■■■■□ 3.89
YIF1A-213ENST00000534374 MAPKBP1O60336 1514 aa39.32■■■■□ 3.89
YIF1A-213ENST00000534374 TTBK1Q5TCY1 1321 aaPredicted RBP39.3■■■■□ 3.88
YIF1A-213ENST00000534374 ABCC10Q5T3U5 1492 aa39.25■■■■□ 3.87
YIF1A-213ENST00000534374 FAM69CQ0P6D2 419 aa39.24■■■■□ 3.87
YIF1A-213ENST00000534374 CSRNP3Q8WYN3 585 aa39.24■■■■□ 3.87
YIF1A-213ENST00000534374 KIF13AQ9H1H9 1805 aa39.24■■■■□ 3.87
YIF1A-213ENST00000534374 UHRF1BP1LA0JNW5 1464 aa39.17■■■■□ 3.86
YIF1A-213ENST00000534374 UACAQ9BZF9 1416 aa39.17■■■■□ 3.86
YIF1A-213ENST00000534374 ABCC2Q92887 1545 aa39.16■■■■□ 3.86
YIF1A-213ENST00000534374 CTTNBP2Q8WZ74 1663 aa39.16■■■■□ 3.86
YIF1A-213ENST00000534374 KIAA0556O60303 1618 aa39.13■■■■□ 3.85
YIF1A-213ENST00000534374 AEBP2Q6ZN18 517 aaPredicted RBP39.12■■■■□ 3.85
YIF1A-213ENST00000534374 EEA1Q15075 1411 aa39.12■■■■□ 3.85
YIF1A-213ENST00000534374 GOLGA3Q08378 1498 aa39.09■■■■□ 3.85
YIF1A-213ENST00000534374 DIP2BQ9P265 1576 aa39.08■■■■□ 3.85
YIF1A-213ENST00000534374 PLB1Q6P1J6 1458 aa38.99■■■■□ 3.83
YIF1A-213ENST00000534374 KDM5BQ9UGL1 1544 aa38.98■■■■□ 3.83
YIF1A-213ENST00000534374 ASXL2Q76L83 1435 aa38.97■■■■□ 3.83
YIF1A-213ENST00000534374 CHIC1Q5VXU3 224 aa38.9■■■■□ 3.82
YIF1A-213ENST00000534374 FAM9AQ8IZU1 332 aaPredicted RBP38.87■■■■□ 3.81
YIF1A-213ENST00000534374 GLI2P10070 1586 aa38.82■■■■□ 3.8
YIF1A-213ENST00000534374 ZCCHC11Q5TAX3 1644 aaKnown RBP38.79■■■■□ 3.8
YIF1A-213ENST00000534374 ABCA8O94911 1581 aa38.78■■■■□ 3.8
YIF1A-213ENST00000534374 P3H3Q8IVL6 736 aa38.77■■■■□ 3.8
YIF1A-213ENST00000534374 TSPOAP1O95153 1857 aa38.77■■■■□ 3.8
YIF1A-213ENST00000534374 EPRSP07814 1512 aaKnown RBP38.73■■■■□ 3.79
YIF1A-213ENST00000534374 SAMD9Q5K651 1589 aa38.68■■■■□ 3.78
YIF1A-213ENST00000534374 KIF21BO75037 1637 aa38.67■■■■□ 3.78
YIF1A-213ENST00000534374 WDR7Q9Y4E6 1490 aa38.66■■■■□ 3.78
YIF1A-213ENST00000534374 KDM6BO15054 1643 aa38.63■■■■□ 3.77
YIF1A-213ENST00000534374 PPRC1Q5VV67 1664 aaKnown RBP38.56■■■■□ 3.76
YIF1A-213ENST00000534374 RANGAP1P46060 587 aaPredicted RBP38.56■■■■□ 3.76
YIF1A-213ENST00000534374 MAP3K4Q9Y6R4 1608 aa38.56■■■■□ 3.76
YIF1A-213ENST00000534374 KCNH8Q96L42 1107 aa38.54■■■■□ 3.76
YIF1A-213ENST00000534374 ATP10BO94823 1461 aa38.53■■■■□ 3.76
YIF1A-213ENST00000534374 TEX14Q8IWB6 1497 aa38.49■■■■□ 3.75
YIF1A-213ENST00000534374 UBTFP17480 764 aaKnown RBP38.48■■■■□ 3.75
YIF1A-213ENST00000534374 ARID3CA6NKF2 412 aa38.45■■■■□ 3.75
YIF1A-213ENST00000534374 FHOD3Q2V2M9 1422 aa38.44■■■■□ 3.74
YIF1A-213ENST00000534374 RAPGEF6Q8TEU7 1601 aa38.43■■■■□ 3.74
YIF1A-213ENST00000534374 CD109Q6YHK3 1445 aa38.42■■■■□ 3.74
YIF1A-213ENST00000534374 EFCAB5A4FU69 1503 aa38.42■■■■□ 3.74
YIF1A-213ENST00000534374 MAGI3Q5TCQ9 1506 aa38.37■■■■□ 3.73
YIF1A-213ENST00000534374 EHMT2Q96KQ7 1210 aa38.36■■■■□ 3.73
YIF1A-213ENST00000534374 CFAP43Q8NDM7 1665 aa38.36■■■■□ 3.73
YIF1A-213ENST00000534374 COL17A1Q9UMD9 1497 aaPredicted RBP38.35■■■■□ 3.73
YIF1A-213ENST00000534374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.34■■■■□ 3.73
YIF1A-213ENST00000534374 HNRNPUL2Q1KMD3 747 aaKnown RBP38.34■■■■□ 3.73
YIF1A-213ENST00000534374 NUP153P49790 1475 aaKnown RBP38.33■■■■□ 3.73
YIF1A-213ENST00000534374 KDM4FA0A1W2PPD8 638 aa38.25■■■■□ 3.71
YIF1A-213ENST00000534374 PLEKHD1A6NEE1 506 aa38.22■■■■□ 3.71
YIF1A-213ENST00000534374 ABCA9Q8IUA7 1624 aa38.16■■■■□ 3.7
YIF1A-213ENST00000534374 ARHGAP35Q9NRY4 1499 aa38.15■■■■□ 3.7
YIF1A-213ENST00000534374 FMN1Q68DA7 1419 aa38.13■■■■□ 3.7
YIF1A-213ENST00000534374 PHLDB1Q86UU1 1377 aa38.13■■■■□ 3.69
YIF1A-213ENST00000534374 ARAP3Q8WWN8 1544 aa38.07■■■■□ 3.68
YIF1A-213ENST00000534374 ATP1B4Q9UN42 357 aaPredicted RBP37.99■■■■□ 3.67
YIF1A-213ENST00000534374 NEO1Q92859 1461 aa37.98■■■■□ 3.67
YIF1A-213ENST00000534374 CDK13Q14004 1512 aaKnown RBP37.94■■■■□ 3.66
YIF1A-213ENST00000534374 ADGRL1O94910 1474 aa37.94■■■■□ 3.66
YIF1A-213ENST00000534374 CDK11AQ9UQ88 783 aaPredicted RBP37.93■■■■□ 3.66
YIF1A-213ENST00000534374 HECW1Q76N89 1606 aa37.91■■■■□ 3.66
YIF1A-213ENST00000534374 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.88■■■■□ 3.651e-7■■■■□ 23.3
YIF1A-213ENST00000534374 RAPGEF3O95398 923 aa37.85■■■■□ 3.65
YIF1A-213ENST00000534374 AKNAQ7Z591 1439 aa37.78■■■■□ 3.64
YIF1A-213ENST00000534374 FANCAO15360 1455 aa37.77■■■■□ 3.64
YIF1A-213ENST00000534374 CASKIN1Q8WXD9 1431 aa37.76■■■■□ 3.63
YIF1A-213ENST00000534374 TTC37Q6PGP7 1564 aa37.76■■■■□ 3.63
YIF1A-213ENST00000534374 PLCH2O75038 1416 aa37.74■■■■□ 3.63
YIF1A-213ENST00000534374 CLIP1P30622 1438 aa37.73■■■■□ 3.63
YIF1A-213ENST00000534374 TROQ12816 1431 aaPredicted RBP37.71■■■■□ 3.63
YIF1A-213ENST00000534374 CFAP74Q9C0B2 1584 aa37.71■■■■□ 3.63
YIF1A-213ENST00000534374 DENND4BO75064 1496 aaPredicted RBP37.71■■■■□ 3.63
YIF1A-213ENST00000534374 CCDC18Q5T9S5 1454 aa37.64■■■■□ 3.62
YIF1A-213ENST00000534374 FRMPD1Q5SYB0 1578 aa37.64■■■■□ 3.62
YIF1A-213ENST00000534374 EFCAB2Q5VUJ9 269 aa37.64■■■■□ 3.62
YIF1A-213ENST00000534374 LRRIQ1Q96JM4 1722 aa37.64■■■■□ 3.62
YIF1A-213ENST00000534374 PCF11O94913 1555 aaKnown RBP37.6■■■■□ 3.61
YIF1A-213ENST00000534374 FYCO1Q9BQS8 1478 aa37.58■■■■□ 3.61
YIF1A-213ENST00000534374 KIF14Q15058 1648 aa37.58■■■■□ 3.61
YIF1A-213ENST00000534374 RICTORQ6R327 1708 aa37.58■■■■□ 3.61
YIF1A-213ENST00000534374 SCAPERQ9BY12 1400 aa37.55■■■■□ 3.6
YIF1A-213ENST00000534374 MYO5CQ9NQX4 1742 aa37.54■■■■□ 3.6
YIF1A-213ENST00000534374 MAGI2Q86UL8 1455 aa37.48■■■■□ 3.59
YIF1A-213ENST00000534374 ZMYM4Q5VZL5 1548 aa37.47■■■■□ 3.59
YIF1A-213ENST00000534374 ARID4BQ4LE39 1312 aaPredicted RBP37.45■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms