RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 PRG4Q92954 1404 aaPredicted RBP23.09■■□□□ 1.29
CAPN1-228ENST00000534373 CARMIL1Q5VZK9 1371 aa23.05■■□□□ 1.28
CAPN1-228ENST00000534373 RUSC2Q8N2Y8 1516 aa23.05■■□□□ 1.28
CAPN1-228ENST00000534373 KIAA0586Q9BVV6 1533 aa23.05■■□□□ 1.28
CAPN1-228ENST00000534373 NPM1P06748 294 aaKnown RBP eCLIP22.87■■□□□ 1.25
CAPN1-228ENST00000534373 RAPGEF2Q9Y4G8 1499 aa22.85■■□□□ 1.25
CAPN1-228ENST00000534373 CARMIL2Q6F5E8 1435 aa22.83■■□□□ 1.25
CAPN1-228ENST00000534373 PTPRGP23470 1445 aa22.8■■□□□ 1.24
CAPN1-228ENST00000534373 IQGAP2Q13576 1575 aa22.8■■□□□ 1.24
CAPN1-228ENST00000534373 TNIKQ9UKE5 1360 aa22.77■■□□□ 1.24
CAPN1-228ENST00000534373 ADCY10Q96PN6 1610 aa22.75■■□□□ 1.23
CAPN1-228ENST00000534373 MAPKBP1O60336 1514 aa22.74■■□□□ 1.23
CAPN1-228ENST00000534373 ABCC10Q5T3U5 1492 aa22.71■■□□□ 1.23
CAPN1-228ENST00000534373 UGGT2Q9NYU1 1516 aa22.7■■□□□ 1.22
CAPN1-228ENST00000534373 FAM69CQ0P6D2 419 aa22.69■■□□□ 1.22
CAPN1-228ENST00000534373 DISP1Q96F81 1524 aa22.68■■□□□ 1.22
CAPN1-228ENST00000534373 KIF13AQ9H1H9 1805 aa22.68■■□□□ 1.22
CAPN1-228ENST00000534373 PRXQ9BXM0 1461 aa22.66■■□□□ 1.22
CAPN1-228ENST00000534373 TTBK1Q5TCY1 1321 aaPredicted RBP22.65■■□□□ 1.22
CAPN1-228ENST00000534373 UHRF1BP1LA0JNW5 1464 aa22.63■■□□□ 1.21
CAPN1-228ENST00000534373 UACAQ9BZF9 1416 aa22.63■■□□□ 1.21
CAPN1-228ENST00000534373 ABCC2Q92887 1545 aa22.62■■□□□ 1.21
CAPN1-228ENST00000534373 DIP2BQ9P265 1576 aa22.59■■□□□ 1.21
CAPN1-228ENST00000534373 CSRNP3Q8WYN3 585 aa22.59■■□□□ 1.21
CAPN1-228ENST00000534373 KIAA0556O60303 1618 aa22.57■■□□□ 1.2
CAPN1-228ENST00000534373 CTTNBP2Q8WZ74 1663 aa22.56■■□□□ 1.2
CAPN1-228ENST00000534373 GOLGA3Q08378 1498 aa22.56■■□□□ 1.2
CAPN1-228ENST00000534373 PLB1Q6P1J6 1458 aa22.54■■□□□ 1.2
CAPN1-228ENST00000534373 EEA1Q15075 1411 aa22.54■■□□□ 1.2
CAPN1-228ENST00000534373 KDM5BQ9UGL1 1544 aa22.52■■□□□ 1.19
CAPN1-228ENST00000534373 ASXL2Q76L83 1435 aa22.51■■□□□ 1.19
CAPN1-228ENST00000534373 FAM9AQ8IZU1 332 aaPredicted RBP22.47■■□□□ 1.19
CAPN1-228ENST00000534373 GLI2P10070 1586 aa22.45■■□□□ 1.18
CAPN1-228ENST00000534373 ZCCHC11Q5TAX3 1644 aaKnown RBP22.39■■□□□ 1.18
CAPN1-228ENST00000534373 AEBP2Q6ZN18 517 aaPredicted RBP22.38■■□□□ 1.17
CAPN1-228ENST00000534373 ABCA8O94911 1581 aa22.38■■□□□ 1.17
CAPN1-228ENST00000534373 EPRSP07814 1512 aaKnown RBP22.37■■□□□ 1.17
CAPN1-228ENST00000534373 TSPOAP1O95153 1857 aa22.37■■□□□ 1.17
CAPN1-228ENST00000534373 KDM6BO15054 1643 aa22.35■■□□□ 1.17
CAPN1-228ENST00000534373 WDR7Q9Y4E6 1490 aa22.33■■□□□ 1.16
CAPN1-228ENST00000534373 P3H3Q8IVL6 736 aa22.32■■□□□ 1.16
CAPN1-228ENST00000534373 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
CAPN1-228ENST00000534373 SAMD9Q5K651 1589 aa22.29■■□□□ 1.16
CAPN1-228ENST00000534373 MAP3K4Q9Y6R4 1608 aa22.28■■□□□ 1.16
CAPN1-228ENST00000534373 TEX14Q8IWB6 1497 aa22.28■■□□□ 1.16
CAPN1-228ENST00000534373 PPRC1Q5VV67 1664 aaKnown RBP22.27■■□□□ 1.16
CAPN1-228ENST00000534373 KIF21BO75037 1637 aa22.25■■□□□ 1.15
CAPN1-228ENST00000534373 KCNH8Q96L42 1107 aa22.23■■□□□ 1.15
CAPN1-228ENST00000534373 ATP10BO94823 1461 aa22.22■■□□□ 1.15
CAPN1-228ENST00000534373 CD109Q6YHK3 1445 aa22.2■■□□□ 1.14
CAPN1-228ENST00000534373 MAGI3Q5TCQ9 1506 aa22.18■■□□□ 1.14
CAPN1-228ENST00000534373 RANGAP1P46060 587 aaPredicted RBP22.17■■□□□ 1.14
CAPN1-228ENST00000534373 CFAP43Q8NDM7 1665 aa22.17■■□□□ 1.14
CAPN1-228ENST00000534373 RAPGEF6Q8TEU7 1601 aa22.16■■□□□ 1.14
CAPN1-228ENST00000534373 COL17A1Q9UMD9 1497 aaPredicted RBP22.15■■□□□ 1.14
CAPN1-228ENST00000534373 EFCAB5A4FU69 1503 aa22.15■■□□□ 1.14
CAPN1-228ENST00000534373 ARID3CA6NKF2 412 aa22.14■■□□□ 1.13
CAPN1-228ENST00000534373 FHOD3Q2V2M9 1422 aa22.14■■□□□ 1.13
CAPN1-228ENST00000534373 UBTFP17480 764 aaKnown RBP22.13■■□□□ 1.13
CAPN1-228ENST00000534373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.11■■□□□ 1.13
CAPN1-228ENST00000534373 HNRNPUL2Q1KMD3 747 aaKnown RBP22.11■■□□□ 1.13
CAPN1-228ENST00000534373 NUP153P49790 1475 aaKnown RBP22.09■■□□□ 1.13
CAPN1-228ENST00000534373 KDM4FA0A1W2PPD8 638 aa22.08■■□□□ 1.13
CAPN1-228ENST00000534373 PHLDB1Q86UU1 1377 aa22.06■■□□□ 1.12
CAPN1-228ENST00000534373 PLEKHD1A6NEE1 506 aa22.05■■□□□ 1.12
CAPN1-228ENST00000534373 ABCA9Q8IUA7 1624 aa22.04■■□□□ 1.12
CAPN1-228ENST00000534373 EHMT2Q96KQ7 1210 aa22.01■■□□□ 1.11
CAPN1-228ENST00000534373 ARAP3Q8WWN8 1544 aa22.01■■□□□ 1.11
CAPN1-228ENST00000534373 FMN1Q68DA7 1419 aa21.99■■□□□ 1.11
CAPN1-228ENST00000534373 NEO1Q92859 1461 aa21.96■■□□□ 1.11
CAPN1-228ENST00000534373 ARHGAP35Q9NRY4 1499 aa21.96■■□□□ 1.11
CAPN1-228ENST00000534373 ADGRL1O94910 1474 aa21.91■■□□□ 1.1
CAPN1-228ENST00000534373 CDK11AQ9UQ88 783 aaPredicted RBP21.89■■□□□ 1.09
CAPN1-228ENST00000534373 ATP1B4Q9UN42 357 aaPredicted RBP21.87■■□□□ 1.09
CAPN1-228ENST00000534373 HECW1Q76N89 1606 aa21.86■■□□□ 1.09
CAPN1-228ENST00000534373 CDK13Q14004 1512 aaKnown RBP21.85■■□□□ 1.09
CAPN1-228ENST00000534373 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.85■■□□□ 1.091e-9■■■■□ 24
CAPN1-228ENST00000534373 RAPGEF3O95398 923 aa21.85■■□□□ 1.09
CAPN1-228ENST00000534373 AKNAQ7Z591 1439 aa21.81■■□□□ 1.08
CAPN1-228ENST00000534373 FANCAO15360 1455 aa21.81■■□□□ 1.08
CAPN1-228ENST00000534373 CFAP74Q9C0B2 1584 aa21.78■■□□□ 1.08
CAPN1-228ENST00000534373 DENND4BO75064 1496 aaPredicted RBP21.78■■□□□ 1.08
CAPN1-228ENST00000534373 PLCH2O75038 1416 aa21.78■■□□□ 1.08
CAPN1-228ENST00000534373 TTC37Q6PGP7 1564 aa21.77■■□□□ 1.08
CAPN1-228ENST00000534373 CASKIN1Q8WXD9 1431 aa21.75■■□□□ 1.07
CAPN1-228ENST00000534373 TROQ12816 1431 aaPredicted RBP21.74■■□□□ 1.07
CAPN1-228ENST00000534373 FRMPD1Q5SYB0 1578 aa21.74■■□□□ 1.07
CAPN1-228ENST00000534373 EFCAB2Q5VUJ9 269 aa21.73■■□□□ 1.07
CAPN1-228ENST00000534373 CLIP1P30622 1438 aa21.72■■□□□ 1.07
CAPN1-228ENST00000534373 CCDC18Q5T9S5 1454 aa21.71■■□□□ 1.07
CAPN1-228ENST00000534373 RICTORQ6R327 1708 aa21.69■■□□□ 1.06
CAPN1-228ENST00000534373 MAGI2Q86UL8 1455 aa21.68■■□□□ 1.06
CAPN1-228ENST00000534373 KIF14Q15058 1648 aa21.68■■□□□ 1.06
CAPN1-228ENST00000534373 SCAPERQ9BY12 1400 aa21.67■■□□□ 1.06
CAPN1-228ENST00000534373 ZMYM4Q5VZL5 1548 aa21.65■■□□□ 1.06
CAPN1-228ENST00000534373 FYCO1Q9BQS8 1478 aa21.65■■□□□ 1.06
CAPN1-228ENST00000534373 LRRIQ1Q96JM4 1722 aa21.65■■□□□ 1.06
CAPN1-228ENST00000534373 MYO5CQ9NQX4 1742 aa21.65■■□□□ 1.06
CAPN1-228ENST00000534373 PCF11O94913 1555 aaKnown RBP21.65■■□□□ 1.06
CAPN1-228ENST00000534373 ARID4BQ4LE39 1312 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms