RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 JPH4Q96JJ6 628 aa26.24■■□□□ 1.79
UBXN1-217ENST00000534176 PRG4Q92954 1404 aaPredicted RBP26.19■■□□□ 1.78
UBXN1-217ENST00000534176 RAPGEF2Q9Y4G8 1499 aa26.14■■□□□ 1.78
UBXN1-217ENST00000534176 ERCC6L2Q5T890 1561 aa26.12■■□□□ 1.77
UBXN1-217ENST00000534176 IQGAP2Q13576 1575 aa26.04■■□□□ 1.76
UBXN1-217ENST00000534176 CARMIL2Q6F5E8 1435 aa26.04■■□□□ 1.76
UBXN1-217ENST00000534176 TRHP20396 242 aaPredicted RBP26.02■■□□□ 1.76
UBXN1-217ENST00000534176 EEA1Q15075 1411 aa26.01■■□□□ 1.75
UBXN1-217ENST00000534176 PRXQ9BXM0 1461 aa25.96■■□□□ 1.75
UBXN1-217ENST00000534176 NPM1P06748 294 aaKnown RBP eCLIP25.91■■□□□ 1.74
UBXN1-217ENST00000534176 TNIKQ9UKE5 1360 aa25.91■■□□□ 1.74
UBXN1-217ENST00000534176 UGGT2Q9NYU1 1516 aa25.9■■□□□ 1.74
UBXN1-217ENST00000534176 PTPRGP23470 1445 aa25.88■■□□□ 1.73
UBXN1-217ENST00000534176 CSRNP3Q8WYN3 585 aa25.88■■□□□ 1.73
UBXN1-217ENST00000534176 CTTNBP2Q8WZ74 1663 aa25.87■■□□□ 1.73
UBXN1-217ENST00000534176 GOLGA3Q08378 1498 aa25.83■■□□□ 1.73
UBXN1-217ENST00000534176 DISP1Q96F81 1524 aa25.81■■□□□ 1.72
UBXN1-217ENST00000534176 MAPKBP1O60336 1514 aa25.78■■□□□ 1.72
UBXN1-217ENST00000534176 ADCY10Q96PN6 1610 aa25.78■■□□□ 1.72
UBXN1-217ENST00000534176 KIAA0556O60303 1618 aa25.76■■□□□ 1.71
UBXN1-217ENST00000534176 FAM9AQ8IZU1 332 aaPredicted RBP25.75■■□□□ 1.71
UBXN1-217ENST00000534176 UHRF1BP1LA0JNW5 1464 aa25.74■■□□□ 1.71
UBXN1-217ENST00000534176 CHIC1Q5VXU3 224 aa25.73■■□□□ 1.71
UBXN1-217ENST00000534176 UACAQ9BZF9 1416 aa25.71■■□□□ 1.71
UBXN1-217ENST00000534176 ABCC2Q92887 1545 aa25.7■■□□□ 1.7
UBXN1-217ENST00000534176 ABCC10Q5T3U5 1492 aa25.66■■□□□ 1.7
UBXN1-217ENST00000534176 KIF21BO75037 1637 aa25.64■■□□□ 1.7
UBXN1-217ENST00000534176 TTBK1Q5TCY1 1321 aaPredicted RBP25.63■■□□□ 1.69
UBXN1-217ENST00000534176 PLB1Q6P1J6 1458 aa25.6■■□□□ 1.69
UBXN1-217ENST00000534176 KIF13AQ9H1H9 1805 aa25.59■■□□□ 1.69
UBXN1-217ENST00000534176 KDM5BQ9UGL1 1544 aa25.58■■□□□ 1.69
UBXN1-217ENST00000534176 FAM69CQ0P6D2 419 aa25.57■■□□□ 1.68
UBXN1-217ENST00000534176 DIP2BQ9P265 1576 aa25.56■■□□□ 1.68
UBXN1-217ENST00000534176 SAMD9Q5K651 1589 aa25.52■■□□□ 1.68
UBXN1-217ENST00000534176 ASXL2Q76L83 1435 aa25.51■■□□□ 1.67
UBXN1-217ENST00000534176 ABCA8O94911 1581 aa25.49■■□□□ 1.67
UBXN1-217ENST00000534176 ZCCHC11Q5TAX3 1644 aaKnown RBP25.46■■□□□ 1.67
UBXN1-217ENST00000534176 GLI2P10070 1586 aa25.46■■□□□ 1.67
UBXN1-217ENST00000534176 EFCAB5A4FU69 1503 aa25.46■■□□□ 1.67
UBXN1-217ENST00000534176 UBTFP17480 764 aaKnown RBP25.4■■□□□ 1.66
UBXN1-217ENST00000534176 WDR7Q9Y4E6 1490 aa25.39■■□□□ 1.65
UBXN1-217ENST00000534176 P3H3Q8IVL6 736 aa25.37■■□□□ 1.65
UBXN1-217ENST00000534176 EPRSP07814 1512 aaKnown RBP25.37■■□□□ 1.65
UBXN1-217ENST00000534176 RAPGEF6Q8TEU7 1601 aa25.33■■□□□ 1.65
UBXN1-217ENST00000534176 TEX14Q8IWB6 1497 aa25.3■■□□□ 1.64
UBXN1-217ENST00000534176 FHOD3Q2V2M9 1422 aa25.29■■□□□ 1.64
UBXN1-217ENST00000534176 MAP3K4Q9Y6R4 1608 aa25.27■■□□□ 1.64
UBXN1-217ENST00000534176 RANGAP1P46060 587 aaPredicted RBP25.27■■□□□ 1.64
UBXN1-217ENST00000534176 ATP10BO94823 1461 aa25.27■■□□□ 1.64
UBXN1-217ENST00000534176 TSPOAP1O95153 1857 aa25.26■■□□□ 1.63
UBXN1-217ENST00000534176 KDM6BO15054 1643 aa25.25■■□□□ 1.63
UBXN1-217ENST00000534176 FMN1Q68DA7 1419 aa25.24■■□□□ 1.63
UBXN1-217ENST00000534176 CFAP43Q8NDM7 1665 aa25.22■■□□□ 1.63
UBXN1-217ENST00000534176 NUP153P49790 1475 aaKnown RBP25.2■■□□□ 1.62
UBXN1-217ENST00000534176 PPRC1Q5VV67 1664 aaKnown RBP25.18■■□□□ 1.62
UBXN1-217ENST00000534176 MAGI3Q5TCQ9 1506 aa25.17■■□□□ 1.62
UBXN1-217ENST00000534176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.17■■□□□ 1.62
UBXN1-217ENST00000534176 HNRNPUL2Q1KMD3 747 aaKnown RBP25.17■■□□□ 1.62
UBXN1-217ENST00000534176 CD109Q6YHK3 1445 aa25.17■■□□□ 1.62
UBXN1-217ENST00000534176 KCNH8Q96L42 1107 aa25.16■■□□□ 1.62
UBXN1-217ENST00000534176 ARHGAP35Q9NRY4 1499 aa25.15■■□□□ 1.62
UBXN1-217ENST00000534176 EHMT2Q96KQ7 1210 aa25.14■■□□□ 1.62
UBXN1-217ENST00000534176 PLEKHD1A6NEE1 506 aa25.13■■□□□ 1.61
UBXN1-217ENST00000534176 PHLDB1Q86UU1 1377 aa25.1■■□□□ 1.61
UBXN1-217ENST00000534176 ARID3CA6NKF2 412 aa25.1■■□□□ 1.61
UBXN1-217ENST00000534176 HECW1Q76N89 1606 aa25.09■■□□□ 1.61
UBXN1-217ENST00000534176 ABCA9Q8IUA7 1624 aa25.09■■□□□ 1.61
UBXN1-217ENST00000534176 CDK11AQ9UQ88 783 aaPredicted RBP25.06■■□□□ 1.6
UBXN1-217ENST00000534176 NEO1Q92859 1461 aa24.98■■□□□ 1.59
UBXN1-217ENST00000534176 CLIP1P30622 1438 aa24.98■■□□□ 1.59
UBXN1-217ENST00000534176 ARAP3Q8WWN8 1544 aa24.96■■□□□ 1.59
UBXN1-217ENST00000534176 ATP1B4Q9UN42 357 aaPredicted RBP24.96■■□□□ 1.59
UBXN1-217ENST00000534176 AEBP2Q6ZN18 517 aaPredicted RBP24.95■■□□□ 1.58
UBXN1-217ENST00000534176 CCDC18Q5T9S5 1454 aa24.95■■□□□ 1.58
UBXN1-217ENST00000534176 CASKIN1Q8WXD9 1431 aa24.95■■□□□ 1.58
UBXN1-217ENST00000534176 COL17A1Q9UMD9 1497 aaPredicted RBP24.94■■□□□ 1.58
UBXN1-217ENST00000534176 CDK13Q14004 1512 aaKnown RBP24.93■■□□□ 1.58
UBXN1-217ENST00000534176 CFAP74Q9C0B2 1584 aa24.92■■□□□ 1.58
UBXN1-217ENST00000534176 FYCO1Q9BQS8 1478 aa24.9■■□□□ 1.58
UBXN1-217ENST00000534176 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.88■■□□□ 1.57
UBXN1-217ENST00000534176 TROQ12816 1431 aaPredicted RBP24.86■■□□□ 1.57
UBXN1-217ENST00000534176 PCF11O94913 1555 aaKnown RBP24.84■■□□□ 1.57
UBXN1-217ENST00000534176 KIF14Q15058 1648 aa24.83■■□□□ 1.57
UBXN1-217ENST00000534176 FANCAO15360 1455 aa24.83■■□□□ 1.56
UBXN1-217ENST00000534176 TTC37Q6PGP7 1564 aa24.8■■□□□ 1.56
UBXN1-217ENST00000534176 PLCH2O75038 1416 aa24.8■■□□□ 1.56
UBXN1-217ENST00000534176 CEP162Q5TB80 1403 aa24.78■■□□□ 1.56
UBXN1-217ENST00000534176 AKNAQ7Z591 1439 aa24.78■■□□□ 1.56
UBXN1-217ENST00000534176 DENND4BO75064 1496 aaPredicted RBP24.76■■□□□ 1.55
UBXN1-217ENST00000534176 LRRIQ1Q96JM4 1722 aa24.75■■□□□ 1.55
UBXN1-217ENST00000534176 MYO5CQ9NQX4 1742 aa24.75■■□□□ 1.55
UBXN1-217ENST00000534176 EFCAB2Q5VUJ9 269 aa24.74■■□□□ 1.55
UBXN1-217ENST00000534176 RAPGEF3O95398 923 aa24.69■■□□□ 1.54
UBXN1-217ENST00000534176 ADGRL1O94910 1474 aa24.68■■□□□ 1.54
UBXN1-217ENST00000534176 MAGI2Q86UL8 1455 aa24.67■■□□□ 1.54
UBXN1-217ENST00000534176 KDM4FA0A1W2PPD8 638 aa24.67■■□□□ 1.54
UBXN1-217ENST00000534176 FRMPD1Q5SYB0 1578 aa24.65■■□□□ 1.54
UBXN1-217ENST00000534176 RICTORQ6R327 1708 aa24.65■■□□□ 1.54
UBXN1-217ENST00000534176 ARHGAP5Q13017 1502 aa24.64■■□□□ 1.53
UBXN1-217ENST00000534176 ZMYM4Q5VZL5 1548 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms