RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 RUSC2Q8N2Y8 1516 aa26.68■■□□□ 1.86
CTSB-230ENST00000534149 FAM69CQ0P6D2 419 aa26.54■■□□□ 1.84
CTSB-230ENST00000534149 ABCC10Q5T3U5 1492 aa26.54■■□□□ 1.84
CTSB-230ENST00000534149 ADCY10Q96PN6 1610 aa26.53■■□□□ 1.84
CTSB-230ENST00000534149 MAPKBP1O60336 1514 aa26.52■■□□□ 1.84
CTSB-230ENST00000534149 NPM1P06748 294 aaKnown RBP eCLIP26.52■■□□□ 1.84
CTSB-230ENST00000534149 DIP2BQ9P265 1576 aa26.5■■□□□ 1.83
CTSB-230ENST00000534149 KIAA0586Q9BVV6 1533 aa26.47■■□□□ 1.83
CTSB-230ENST00000534149 IGF1RP08069 1367 aa26.45■■□□□ 1.82
CTSB-230ENST00000534149 CUL7Q14999 1698 aa26.44■■□□□ 1.82
CTSB-230ENST00000534149 KIF27Q86VH2 1401 aa26.42■■□□□ 1.82
CTSB-230ENST00000534149 TSPOAP1O95153 1857 aa26.36■■□□□ 1.81
CTSB-230ENST00000534149 KDM6BO15054 1643 aa26.35■■□□□ 1.81
CTSB-230ENST00000534149 PTPRGP23470 1445 aa26.29■■□□□ 1.8
CTSB-230ENST00000534149 TTBK1Q5TCY1 1321 aaPredicted RBP26.28■■□□□ 1.8
CTSB-230ENST00000534149 CARMIL1Q5VZK9 1371 aa26.28■■□□□ 1.8
CTSB-230ENST00000534149 CARMIL2Q6F5E8 1435 aa26.22■■□□□ 1.79
CTSB-230ENST00000534149 TNIKQ9UKE5 1360 aa26.21■■□□□ 1.79
CTSB-230ENST00000534149 KDM4FA0A1W2PPD8 638 aa26.21■■□□□ 1.79
CTSB-230ENST00000534149 ABCC2Q92887 1545 aa26.2■■□□□ 1.79
CTSB-230ENST00000534149 IQGAP2Q13576 1575 aa26.2■■□□□ 1.78
CTSB-230ENST00000534149 ASXL2Q76L83 1435 aa26.15■■□□□ 1.78
CTSB-230ENST00000534149 PPRC1Q5VV67 1664 aaKnown RBP26.12■■□□□ 1.77
CTSB-230ENST00000534149 PLB1Q6P1J6 1458 aa26.12■■□□□ 1.77
CTSB-230ENST00000534149 GLI2P10070 1586 aa26.11■■□□□ 1.77
CTSB-230ENST00000534149 UHRF1BP1LA0JNW5 1464 aa26.11■■□□□ 1.77
CTSB-230ENST00000534149 DISP1Q96F81 1524 aa26.1■■□□□ 1.77
CTSB-230ENST00000534149 UACAQ9BZF9 1416 aa26.08■■□□□ 1.77
CTSB-230ENST00000534149 UGGT2Q9NYU1 1516 aa26.01■■□□□ 1.75
CTSB-230ENST00000534149 KDM5BQ9UGL1 1544 aa26■■□□□ 1.75
CTSB-230ENST00000534149 RAPGEF2Q9Y4G8 1499 aa26■■□□□ 1.75
CTSB-230ENST00000534149 EPRSP07814 1512 aaKnown RBP25.99■■□□□ 1.75
CTSB-230ENST00000534149 KIAA0556O60303 1618 aa25.98■■□□□ 1.75
CTSB-230ENST00000534149 ZCCHC11Q5TAX3 1644 aaKnown RBP25.98■■□□□ 1.75
CTSB-230ENST00000534149 MAP3K4Q9Y6R4 1608 aa25.98■■□□□ 1.75
CTSB-230ENST00000534149 COL17A1Q9UMD9 1497 aaPredicted RBP25.96■■□□□ 1.75
CTSB-230ENST00000534149 ADGRL1O94910 1474 aa25.94■■□□□ 1.74
CTSB-230ENST00000534149 TEX14Q8IWB6 1497 aa25.9■■□□□ 1.74
CTSB-230ENST00000534149 CTTNBP2Q8WZ74 1663 aa25.85■■□□□ 1.73
CTSB-230ENST00000534149 WDR7Q9Y4E6 1490 aa25.85■■□□□ 1.73
CTSB-230ENST00000534149 ABCA8O94911 1581 aa25.75■■□□□ 1.71
CTSB-230ENST00000534149 GOLGA3Q08378 1498 aa25.75■■□□□ 1.71
CTSB-230ENST00000534149 ILDR1Q86SU0 546 aaPredicted RBP25.73■■□□□ 1.71
CTSB-230ENST00000534149 CFAP43Q8NDM7 1665 aa25.73■■□□□ 1.71
CTSB-230ENST00000534149 CD109Q6YHK3 1445 aa25.71■■□□□ 1.71
CTSB-230ENST00000534149 MAGI3Q5TCQ9 1506 aa25.7■■□□□ 1.7
CTSB-230ENST00000534149 KCNH8Q96L42 1107 aa25.7■■□□□ 1.7
CTSB-230ENST00000534149 HECW2Q9P2P5 1572 aa25.69■■□□□ 1.7
CTSB-230ENST00000534149 PRXQ9BXM0 1461 aa25.66■■□□□ 1.7
CTSB-230ENST00000534149 ARID3CA6NKF2 412 aa25.58■■□□□ 1.69
CTSB-230ENST00000534149 KIF21BO75037 1637 aa25.58■■□□□ 1.69
CTSB-230ENST00000534149 P3H3Q8IVL6 736 aa25.54■■□□□ 1.68
CTSB-230ENST00000534149 ATP10BO94823 1461 aa25.52■■□□□ 1.68
CTSB-230ENST00000534149 ARAP3Q8WWN8 1544 aa25.51■■□□□ 1.67
CTSB-230ENST00000534149 FAM9AQ8IZU1 332 aaPredicted RBP25.47■■□□□ 1.67
CTSB-230ENST00000534149 ABCA9Q8IUA7 1624 aa25.47■■□□□ 1.67
CTSB-230ENST00000534149 SAMD9Q5K651 1589 aa25.44■■□□□ 1.66
CTSB-230ENST00000534149 RAPGEF6Q8TEU7 1601 aa25.42■■□□□ 1.66
CTSB-230ENST00000534149 PHLDB1Q86UU1 1377 aa25.38■■□□□ 1.65
CTSB-230ENST00000534149 RAPGEF3O95398 923 aa25.37■■□□□ 1.65
CTSB-230ENST00000534149 ADAMTSL3P82987 1691 aa25.36■■□□□ 1.65
CTSB-230ENST00000534149 NEO1Q92859 1461 aa25.35■■□□□ 1.65
CTSB-230ENST00000534149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.35■■□□□ 1.65
CTSB-230ENST00000534149 HNRNPUL2Q1KMD3 747 aaKnown RBP25.35■■□□□ 1.65
CTSB-230ENST00000534149 CSRNP3Q8WYN3 585 aa25.35■■□□□ 1.65
CTSB-230ENST00000534149 FRMPD1Q5SYB0 1578 aa25.33■■□□□ 1.65
CTSB-230ENST00000534149 PTPRMP28827 1452 aa25.33■■□□□ 1.65
CTSB-230ENST00000534149 NUP153P49790 1475 aaKnown RBP25.32■■□□□ 1.64
CTSB-230ENST00000534149 RANGAP1P46060 587 aaPredicted RBP25.29■■□□□ 1.64
CTSB-230ENST00000534149 BCORL1Q5H9F3 1711 aa25.28■■□□□ 1.64
CTSB-230ENST00000534149 FHOD3Q2V2M9 1422 aa25.28■■□□□ 1.64
CTSB-230ENST00000534149 MADDQ8WXG6 1647 aa25.25■■□□□ 1.63
CTSB-230ENST00000534149 ARID4BQ4LE39 1312 aaPredicted RBP25.24■■□□□ 1.63
CTSB-230ENST00000534149 ARHGEF40Q8TER5 1519 aa25.21■■□□□ 1.63
CTSB-230ENST00000534149 RICTORQ6R327 1708 aa25.19■■□□□ 1.62
CTSB-230ENST00000534149 EEA1Q15075 1411 aa25.19■■□□□ 1.62
CTSB-230ENST00000534149 DENND4BO75064 1496 aaPredicted RBP25.18■■□□□ 1.62
CTSB-230ENST00000534149 PLEKHD1A6NEE1 506 aa25.17■■□□□ 1.62
CTSB-230ENST00000534149 PCF11O94913 1555 aaKnown RBP25.16■■□□□ 1.62
CTSB-230ENST00000534149 AKNAQ7Z591 1439 aa25.16■■□□□ 1.62
CTSB-230ENST00000534149 FBXO41Q8TF61 875 aa25.16■■□□□ 1.62
CTSB-230ENST00000534149 RIMS1Q86UR5 1692 aaKnown RBP25.16■■□□□ 1.62
CTSB-230ENST00000534149 CFAP74Q9C0B2 1584 aa25.15■■□□□ 1.62
CTSB-230ENST00000534149 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.15■■□□□ 1.625e-6■□□□□ 9.5
CTSB-230ENST00000534149 FANCAO15360 1455 aa25.15■■□□□ 1.62
CTSB-230ENST00000534149 TTC37Q6PGP7 1564 aa25.14■■□□□ 1.61
CTSB-230ENST00000534149 LMTK3Q96Q04 1460 aa25.13■■□□□ 1.61
CTSB-230ENST00000534149 EFCAB5A4FU69 1503 aa25.11■■□□□ 1.61
CTSB-230ENST00000534149 ZMYM4Q5VZL5 1548 aa25.08■■□□□ 1.61
CTSB-230ENST00000534149 SIGLEC1Q9BZZ2 1709 aa25.07■■□□□ 1.6
CTSB-230ENST00000534149 CDK13Q14004 1512 aaKnown RBP25.07■■□□□ 1.6
CTSB-230ENST00000534149 ZFYVE16Q7Z3T8 1539 aa25.06■■□□□ 1.6
CTSB-230ENST00000534149 YEATS2Q9ULM3 1422 aa25.05■■□□□ 1.6
CTSB-230ENST00000534149 POGZQ7Z3K3 1410 aa25.03■■□□□ 1.6
CTSB-230ENST00000534149 PLPPR3Q6T4P5 718 aa25.03■■□□□ 1.6
CTSB-230ENST00000534149 HECW1Q76N89 1606 aa25.01■■□□□ 1.59
CTSB-230ENST00000534149 HSPA2P54652 639 aa24.99■■□□□ 1.59
CTSB-230ENST00000534149 MAGI2Q86UL8 1455 aa24.98■■□□□ 1.59
CTSB-230ENST00000534149 PLCH2O75038 1416 aa24.96■■□□□ 1.59
CTSB-230ENST00000534149 SCAPERQ9BY12 1400 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms