RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 NISCHQ9Y2I1 1504 aa37.94■■■■□ 3.66
CTSB-230ENST00000534149 ABCC9O60706 1549 aa34.49■■■■□ 3.11
CTSB-230ENST00000534149 CCDC180Q9P1Z9 1646 aa34.18■■■■□ 3.06
CTSB-230ENST00000534149 RB1CC1Q8TDY2 1594 aa32.67■■■□□ 2.82
CTSB-230ENST00000534149 DNAJC5BQ9UF47 199 aa32.59■■■□□ 2.81
CTSB-230ENST00000534149 NACADO15069 1562 aa32.36■■■□□ 2.77
CTSB-230ENST00000534149 DCAF8L2P0C7V8 631 aa32.16■■■□□ 2.74
CTSB-230ENST00000534149 PABPN1Q86U42 306 aaKnown RBP eCLIP32.06■■■□□ 2.72
CTSB-230ENST00000534149 UNC13AQ9UPW8 1703 aa31.98■■■□□ 2.71
CTSB-230ENST00000534149 MYO15BQ96JP2 1530 aa31.8■■■□□ 2.68
CTSB-230ENST00000534149 BICRAQ9NZM4 1560 aa31.76■■■□□ 2.67
CTSB-230ENST00000534149 ZCCHC6Q5VYS8 1495 aaKnown RBP31.4■■■□□ 2.62
CTSB-230ENST00000534149 DCAF1Q9Y4B6 1507 aa31.29■■■□□ 2.6
CTSB-230ENST00000534149 SHROOM4Q9ULL8 1493 aa31.24■■■□□ 2.59
CTSB-230ENST00000534149 SCRIBQ14160 1630 aa31.17■■■□□ 2.58
CTSB-230ENST00000534149 CC2D2AQ9P2K1 1620 aa31.14■■■□□ 2.58
CTSB-230ENST00000534149 CECR2Q9BXF3 1484 aa31.08■■■□□ 2.57
CTSB-230ENST00000534149 EIF4G1Q04637 1599 aaKnown RBP31■■■□□ 2.55
CTSB-230ENST00000534149 DNAJC5Q9H3Z4 198 aa30.1■■■□□ 2.41
CTSB-230ENST00000534149 NCAPD3P42695 1498 aa29.87■■■□□ 2.37
CTSB-230ENST00000534149 CUX2O14529 1486 aa29.81■■■□□ 2.36
CTSB-230ENST00000534149 ERCC6Q03468 1493 aa29.8■■■□□ 2.36
CTSB-230ENST00000534149 ATAD2BQ9ULI0 1458 aa29.77■■■□□ 2.36
CTSB-230ENST00000534149 SMARCA4P51532 1647 aa29.68■■■□□ 2.34
CTSB-230ENST00000534149 SMARCA2P51531 1590 aa29.66■■■□□ 2.34
CTSB-230ENST00000534149 HMGXB3Q12766 1538 aa29.65■■■□□ 2.34
CTSB-230ENST00000534149 NESP48681 1621 aa29.56■■■□□ 2.32
CTSB-230ENST00000534149 BAZ1BQ9UIG0 1483 aaKnown RBP29.47■■■□□ 2.31
CTSB-230ENST00000534149 BAZ1AQ9NRL2 1556 aaPredicted RBP29.47■■■□□ 2.31
CTSB-230ENST00000534149 PEG3Q9GZU2 1588 aa29.37■■■□□ 2.29
CTSB-230ENST00000534149 THOC2Q8NI27 1593 aaKnown RBP29.31■■■□□ 2.28
CTSB-230ENST00000534149 LAMC3Q9Y6N6 1575 aa29.26■■■□□ 2.28
CTSB-230ENST00000534149 MROH2BQ7Z745 1585 aa29.26■■■□□ 2.27
CTSB-230ENST00000534149 KIF21AQ7Z4S6 1674 aa29.18■■■□□ 2.26
CTSB-230ENST00000534149 PDS5BQ9NTI5 1447 aa29.09■■■□□ 2.25
CTSB-230ENST00000534149 CADPSQ9ULU8 1353 aa28.96■■■□□ 2.23
CTSB-230ENST00000534149 WIZO95785 1651 aa28.9■■■□□ 2.22
CTSB-230ENST00000534149 MRC2Q9UBG0 1479 aa28.89■■■□□ 2.22
CTSB-230ENST00000534149 WDR62O43379 1518 aa28.83■■■□□ 2.21
CTSB-230ENST00000534149 TRIM41Q8WV44 630 aa28.72■■■□□ 2.19
CTSB-230ENST00000534149 CEP164Q9UPV0 1460 aa28.72■■■□□ 2.19
CTSB-230ENST00000534149 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
CTSB-230ENST00000534149 CFTRP13569 1480 aa28.58■■■□□ 2.17
CTSB-230ENST00000534149 RSF1Q96T23 1441 aaPredicted RBP28.52■■■□□ 2.16
CTSB-230ENST00000534149 TOP2AP11388 1531 aaKnown RBP28.5■■■□□ 2.15
CTSB-230ENST00000534149 URB2Q14146 1524 aaKnown RBP28.45■■■□□ 2.15
CTSB-230ENST00000534149 OSCARQ8IYS5 282 aa28.38■■■□□ 2.13
CTSB-230ENST00000534149 PRDM2Q13029 1718 aa28.31■■■□□ 2.12
CTSB-230ENST00000534149 CCDC88BA6NC98 1476 aa28.17■■■□□ 2.1
CTSB-230ENST00000534149 ZNF608Q9ULD9 1512 aaPredicted RBP28.15■■■□□ 2.1
CTSB-230ENST00000534149 IFT140Q96RY7 1462 aa28.14■■■□□ 2.09
CTSB-230ENST00000534149 RIMBP3CA6NJZ7 1639 aa28.1■■■□□ 2.09
CTSB-230ENST00000534149 RIMBP3BA6NNM3 1639 aa28.1■■■□□ 2.09
CTSB-230ENST00000534149 RIMBP3Q9UFD9 1639 aa28.1■■■□□ 2.09
CTSB-230ENST00000534149 TOPBP1Q92547 1522 aa28.08■■■□□ 2.09
CTSB-230ENST00000534149 EIF4G3O43432 1585 aaKnown RBP27.99■■■□□ 2.07
CTSB-230ENST00000534149 ARHGEF11O15085 1522 aa27.97■■■□□ 2.07
CTSB-230ENST00000534149 ABCC8Q09428 1581 aa27.95■■■□□ 2.07
CTSB-230ENST00000534149 DNMBPQ6XZF7 1577 aa27.95■■■□□ 2.07
CTSB-230ENST00000534149 TARBP1Q13395 1621 aaKnown RBP27.86■■■□□ 2.05
CTSB-230ENST00000534149 AQRO60306 1485 aaKnown RBP eCLIP27.85■■■□□ 2.051e-7■■■■■ 35.8
CTSB-230ENST00000534149 CHD1O14646 1710 aa27.85■■■□□ 2.05
CTSB-230ENST00000534149 POLA1P09884 1462 aaPredicted RBP27.78■■■□□ 2.04
CTSB-230ENST00000534149 CYB5RLQ6IPT4 315 aa27.77■■■□□ 2.04
CTSB-230ENST00000534149 FBLN2P98095 1184 aa27.72■■■□□ 2.03
CTSB-230ENST00000534149 RAD54L2Q9Y4B4 1467 aa27.7■■■□□ 2.02
CTSB-230ENST00000534149 ARAP1Q96P48 1450 aa27.69■■■□□ 2.02
CTSB-230ENST00000534149 TDRD9Q8NDG6 1382 aaKnown RBP27.63■■■□□ 2.01
CTSB-230ENST00000534149 SOGA1O94964 1423 aa27.63■■■□□ 2.01
CTSB-230ENST00000534149 SNAPC4Q5SXM2 1469 aa27.57■■■□□ 2
CTSB-230ENST00000534149 FGD5Q6ZNL6 1462 aa27.57■■■□□ 2
CTSB-230ENST00000534149 TRHP20396 242 aaPredicted RBP27.56■■■□□ 2
CTSB-230ENST00000534149 WDR97A6NE52 1622 aa27.52■■■□□ 2
CTSB-230ENST00000534149 CUX1P39880 1505 aa27.51■■□□□ 1.99
CTSB-230ENST00000534149 CLASP1Q7Z460 1538 aa27.5■■□□□ 1.99
CTSB-230ENST00000534149 MAGI1Q96QZ7 1491 aaPredicted RBP27.45■■□□□ 1.99
CTSB-230ENST00000534149 CHMP7Q8WUX9 453 aaPredicted RBP27.45■■□□□ 1.98
CTSB-230ENST00000534149 SYNJ1O43426 1573 aa27.44■■□□□ 1.98
CTSB-230ENST00000534149 GRIN2BQ13224 1484 aa27.43■■□□□ 1.98
CTSB-230ENST00000534149 SYNJ2O15056 1496 aa27.38■■□□□ 1.97
CTSB-230ENST00000534149 PBRM1Q86U86 1689 aa27.34■■□□□ 1.97
CTSB-230ENST00000534149 GAPVD1Q14C86 1478 aa27.3■■□□□ 1.96
CTSB-230ENST00000534149 ABCA5Q8WWZ7 1642 aa27.23■■□□□ 1.95
CTSB-230ENST00000534149 ABCA10Q8WWZ4 1543 aa27.22■■□□□ 1.95
CTSB-230ENST00000534149 GRIN2AQ12879 1464 aa27.09■■□□□ 1.93
CTSB-230ENST00000534149 ERCC6L2Q5T890 1561 aa27.08■■□□□ 1.93
CTSB-230ENST00000534149 SUPT5HO00267 1087 aaKnown RBP27.06■■□□□ 1.92
CTSB-230ENST00000534149 ADAMTS12P58397 1594 aa27.05■■□□□ 1.92
CTSB-230ENST00000534149 WRNQ14191 1432 aaPredicted RBP eCLIP27.05■■□□□ 1.92
CTSB-230ENST00000534149 CEP170Q5SW79 1584 aa27.02■■□□□ 1.92
CTSB-230ENST00000534149 NUP160Q12769 1436 aa26.99■■□□□ 1.91
CTSB-230ENST00000534149 BIVM-ERCC5R4GMW8 1640 aa26.98■■□□□ 1.91
CTSB-230ENST00000534149 TOP2BQ02880 1626 aa26.98■■□□□ 1.91
CTSB-230ENST00000534149 AEBP2Q6ZN18 517 aaPredicted RBP26.95■■□□□ 1.9
CTSB-230ENST00000534149 FHAD1B1AJZ9 1412 aa26.93■■□□□ 1.9
CTSB-230ENST00000534149 SHROOM2Q13796 1616 aa26.92■■□□□ 1.9
CTSB-230ENST00000534149 ERICH3Q5RHP9 1530 aa26.87■■□□□ 1.89
CTSB-230ENST00000534149 PRG4Q92954 1404 aaPredicted RBP26.77■■□□□ 1.88
CTSB-230ENST00000534149 KIF13AQ9H1H9 1805 aa26.74■■□□□ 1.87
CTSB-230ENST00000534149 JPH4Q96JJ6 628 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms