RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 FOXD1Q16676 465 aa15.42■□□□□ 0.06
COPB1-210ENST00000533533 PRG4Q92954 1404 aaPredicted RBP15.38■□□□□ 0.05
COPB1-210ENST00000533533 JPH4Q96JJ6 628 aa15.36■□□□□ 0.05
COPB1-210ENST00000533533 KIF13AQ9H1H9 1805 aa15.35■□□□□ 0.05
COPB1-210ENST00000533533 RUSC2Q8N2Y8 1516 aa15.32■□□□□ 0.04
COPB1-210ENST00000533533 NPM1P06748 294 aaKnown RBP eCLIP15.24■□□□□ 0.03
COPB1-210ENST00000533533 ABCC10Q5T3U5 1492 aa15.24■□□□□ 0.03
COPB1-210ENST00000533533 IGF1RP08069 1367 aa15.24■□□□□ 0.03
COPB1-210ENST00000533533 MAPKBP1O60336 1514 aa15.23■□□□□ 0.03
COPB1-210ENST00000533533 KIAA0586Q9BVV6 1533 aa15.23■□□□□ 0.03
COPB1-210ENST00000533533 FAM69CQ0P6D2 419 aa15.23■□□□□ 0.03
COPB1-210ENST00000533533 ADCY10Q96PN6 1610 aa15.22■□□□□ 0.03
COPB1-210ENST00000533533 KIF27Q86VH2 1401 aa15.22■□□□□ 0.03
COPB1-210ENST00000533533 CUL7Q14999 1698 aa15.22■□□□□ 0.03
COPB1-210ENST00000533533 DIP2BQ9P265 1576 aa15.19■□□□□ 0.02
COPB1-210ENST00000533533 CARMIL1Q5VZK9 1371 aa15.13■□□□□ 0.01
COPB1-210ENST00000533533 TSPOAP1O95153 1857 aa15.13■□□□□ 0.01
COPB1-210ENST00000533533 PTPRGP23470 1445 aa15.12■□□□□ 0.01
COPB1-210ENST00000533533 KDM6BO15054 1643 aa15.1■□□□□ 0.01
COPB1-210ENST00000533533 CARMIL2Q6F5E8 1435 aa15.09■□□□□ 0.01
COPB1-210ENST00000533533 TNIKQ9UKE5 1360 aa15.08■□□□□ 0
COPB1-210ENST00000533533 TTBK1Q5TCY1 1321 aaPredicted RBP15.07■□□□□ 0
COPB1-210ENST00000533533 IQGAP2Q13576 1575 aa15.07■□□□□ 0
COPB1-210ENST00000533533 ABCC2Q92887 1545 aa15.06■□□□□ 0
COPB1-210ENST00000533533 ASXL2Q76L83 1435 aa15.02■□□□□ -0
COPB1-210ENST00000533533 UHRF1BP1LA0JNW5 1464 aa15.01□□□□□ -0.01
COPB1-210ENST00000533533 PLB1Q6P1J6 1458 aa15.01□□□□□ -0.01
COPB1-210ENST00000533533 KDM4FA0A1W2PPD8 638 aa15.01□□□□□ -0.01
COPB1-210ENST00000533533 DISP1Q96F81 1524 aa15.01□□□□□ -0.01
COPB1-210ENST00000533533 GLI2P10070 1586 aa15□□□□□ -0.01
COPB1-210ENST00000533533 UACAQ9BZF9 1416 aa15□□□□□ -0.01
COPB1-210ENST00000533533 PPRC1Q5VV67 1664 aaKnown RBP14.99□□□□□ -0.01
COPB1-210ENST00000533533 RAPGEF2Q9Y4G8 1499 aa14.97□□□□□ -0.01
COPB1-210ENST00000533533 UGGT2Q9NYU1 1516 aa14.97□□□□□ -0.01
COPB1-210ENST00000533533 KDM5BQ9UGL1 1544 aa14.95□□□□□ -0.02
COPB1-210ENST00000533533 EPRSP07814 1512 aaKnown RBP14.92□□□□□ -0.02
COPB1-210ENST00000533533 KIAA0556O60303 1618 aa14.92□□□□□ -0.02
COPB1-210ENST00000533533 ZCCHC11Q5TAX3 1644 aaKnown RBP14.92□□□□□ -0.02
COPB1-210ENST00000533533 MAP3K4Q9Y6R4 1608 aa14.92□□□□□ -0.02
COPB1-210ENST00000533533 COL17A1Q9UMD9 1497 aaPredicted RBP14.89□□□□□ -0.03
COPB1-210ENST00000533533 TEX14Q8IWB6 1497 aa14.88□□□□□ -0.03
COPB1-210ENST00000533533 CTTNBP2Q8WZ74 1663 aa14.87□□□□□ -0.03
COPB1-210ENST00000533533 ADGRL1O94910 1474 aa14.85□□□□□ -0.03
COPB1-210ENST00000533533 WDR7Q9Y4E6 1490 aa14.85□□□□□ -0.03
COPB1-210ENST00000533533 GOLGA3Q08378 1498 aa14.83□□□□□ -0.03
COPB1-210ENST00000533533 ABCA8O94911 1581 aa14.81□□□□□ -0.04
COPB1-210ENST00000533533 CFAP43Q8NDM7 1665 aa14.78□□□□□ -0.04
COPB1-210ENST00000533533 PRXQ9BXM0 1461 aa14.78□□□□□ -0.04
COPB1-210ENST00000533533 CD109Q6YHK3 1445 aa14.78□□□□□ -0.04
COPB1-210ENST00000533533 PLPPR3Q6T4P5 718 aa14.78□□□□□ -0.04
COPB1-210ENST00000533533 MAGI3Q5TCQ9 1506 aa14.77□□□□□ -0.04
COPB1-210ENST00000533533 KCNH8Q96L42 1107 aa14.77□□□□□ -0.05
COPB1-210ENST00000533533 HECW2Q9P2P5 1572 aa14.7□□□□□ -0.06
COPB1-210ENST00000533533 ILDR1Q86SU0 546 aaPredicted RBP14.7□□□□□ -0.06
COPB1-210ENST00000533533 FAM9AQ8IZU1 332 aaPredicted RBP14.7□□□□□ -0.06
COPB1-210ENST00000533533 ARID3CA6NKF2 412 aa14.68□□□□□ -0.06
COPB1-210ENST00000533533 P3H3Q8IVL6 736 aa14.68□□□□□ -0.06
COPB1-210ENST00000533533 ATP10BO94823 1461 aa14.68□□□□□ -0.06
COPB1-210ENST00000533533 ARAP3Q8WWN8 1544 aa14.66□□□□□ -0.06
COPB1-210ENST00000533533 KIF21BO75037 1637 aa14.65□□□□□ -0.06
COPB1-210ENST00000533533 SAMD9Q5K651 1589 aa14.64□□□□□ -0.07
COPB1-210ENST00000533533 ABCA9Q8IUA7 1624 aa14.64□□□□□ -0.07
COPB1-210ENST00000533533 CSRNP3Q8WYN3 585 aa14.63□□□□□ -0.07
COPB1-210ENST00000533533 PHLDB1Q86UU1 1377 aa14.62□□□□□ -0.07
COPB1-210ENST00000533533 RAPGEF6Q8TEU7 1601 aa14.62□□□□□ -0.07
COPB1-210ENST00000533533 RAPGEF3O95398 923 aa14.58□□□□□ -0.08
COPB1-210ENST00000533533 NEO1Q92859 1461 aa14.57□□□□□ -0.08
COPB1-210ENST00000533533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
COPB1-210ENST00000533533 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
COPB1-210ENST00000533533 NUP153P49790 1475 aaKnown RBP14.57□□□□□ -0.08
COPB1-210ENST00000533533 ADAMTSL3P82987 1691 aa14.55□□□□□ -0.08
COPB1-210ENST00000533533 EEA1Q15075 1411 aa14.54□□□□□ -0.08
COPB1-210ENST00000533533 FRMPD1Q5SYB0 1578 aa14.53□□□□□ -0.08
COPB1-210ENST00000533533 FHOD3Q2V2M9 1422 aa14.53□□□□□ -0.08
COPB1-210ENST00000533533 RANGAP1P46060 587 aaPredicted RBP14.53□□□□□ -0.08
COPB1-210ENST00000533533 PTPRMP28827 1452 aa14.52□□□□□ -0.08
COPB1-210ENST00000533533 POTEDQ86YR6 584 aa14.51□□□□□ -0.09
COPB1-210ENST00000533533 BCORL1Q5H9F3 1711 aa14.5□□□□□ -0.09
COPB1-210ENST00000533533 PLEKHD1A6NEE1 506 aa14.5□□□□□ -0.09
COPB1-210ENST00000533533 ARID4BQ4LE39 1312 aaPredicted RBP14.48□□□□□ -0.09
COPB1-210ENST00000533533 MSH5O43196 834 aa14.48□□□□□ -0.09
COPB1-210ENST00000533533 RICTORQ6R327 1708 aa14.48□□□□□ -0.09
COPB1-210ENST00000533533 DENND4BO75064 1496 aaPredicted RBP14.47□□□□□ -0.09
COPB1-210ENST00000533533 MADDQ8WXG6 1647 aa14.47□□□□□ -0.09
COPB1-210ENST00000533533 EFCAB5A4FU69 1503 aa14.46□□□□□ -0.09
COPB1-210ENST00000533533 ARHGEF40Q8TER5 1519 aa14.46□□□□□ -0.09
COPB1-210ENST00000533533 AKNAQ7Z591 1439 aa14.46□□□□□ -0.09
COPB1-210ENST00000533533 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.46□□□□□ -0.14e-7■■■■□ 24.7
COPB1-210ENST00000533533 FANCAO15360 1455 aa14.45□□□□□ -0.1
COPB1-210ENST00000533533 CFAP74Q9C0B2 1584 aa14.45□□□□□ -0.1
COPB1-210ENST00000533533 TTC37Q6PGP7 1564 aa14.43□□□□□ -0.1
COPB1-210ENST00000533533 PIAS4Q8N2W9 510 aaPredicted RBP14.42□□□□□ -0.1
COPB1-210ENST00000533533 PCF11O94913 1555 aaKnown RBP14.42□□□□□ -0.1
COPB1-210ENST00000533533 RIMS1Q86UR5 1692 aaKnown RBP14.42□□□□□ -0.1
COPB1-210ENST00000533533 FBXO41Q8TF61 875 aa14.41□□□□□ -0.1
COPB1-210ENST00000533533 PPP6R1Q9UPN7 881 aa14.41□□□□□ -0.1
COPB1-210ENST00000533533 CDK13Q14004 1512 aaKnown RBP14.41□□□□□ -0.1
COPB1-210ENST00000533533 ZMYM4Q5VZL5 1548 aa14.41□□□□□ -0.1
COPB1-210ENST00000533533 LMTK3Q96Q04 1460 aa14.4□□□□□ -0.1
COPB1-210ENST00000533533 ZFYVE16Q7Z3T8 1539 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms