RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 IGF1RP08069 1367 aa19.72■□□□□ 0.75
CLCF1-202ENST00000533438 PRG4Q92954 1404 aaPredicted RBP19.68■□□□□ 0.74
CLCF1-202ENST00000533438 JPH4Q96JJ6 628 aa19.67■□□□□ 0.74
CLCF1-202ENST00000533438 KIAA0586Q9BVV6 1533 aa19.62■□□□□ 0.73
CLCF1-202ENST00000533438 CARMIL1Q5VZK9 1371 aa19.58■□□□□ 0.73
CLCF1-202ENST00000533438 KIF13AQ9H1H9 1805 aa19.5■□□□□ 0.71
CLCF1-202ENST00000533438 ADCY10Q96PN6 1610 aa19.49■□□□□ 0.71
CLCF1-202ENST00000533438 ABCC10Q5T3U5 1492 aa19.48■□□□□ 0.71
CLCF1-202ENST00000533438 IQGAP2Q13576 1575 aa19.48■□□□□ 0.71
CLCF1-202ENST00000533438 RAPGEF2Q9Y4G8 1499 aa19.44■□□□□ 0.7
CLCF1-202ENST00000533438 FAM69CQ0P6D2 419 aa19.44■□□□□ 0.7
CLCF1-202ENST00000533438 MAPKBP1O60336 1514 aa19.44■□□□□ 0.7
CLCF1-202ENST00000533438 NPM1P06748 294 aaKnown RBP eCLIP19.43■□□□□ 0.7
CLCF1-202ENST00000533438 CARMIL2Q6F5E8 1435 aa19.4■□□□□ 0.7
CLCF1-202ENST00000533438 PTPRGP23470 1445 aa19.38■□□□□ 0.69
CLCF1-202ENST00000533438 DISP1Q96F81 1524 aa19.37■□□□□ 0.69
CLCF1-202ENST00000533438 TNIKQ9UKE5 1360 aa19.37■□□□□ 0.69
CLCF1-202ENST00000533438 DIP2BQ9P265 1576 aa19.36■□□□□ 0.69
CLCF1-202ENST00000533438 UGGT2Q9NYU1 1516 aa19.36■□□□□ 0.69
CLCF1-202ENST00000533438 CTTNBP2Q8WZ74 1663 aa19.35■□□□□ 0.69
CLCF1-202ENST00000533438 KIAA0556O60303 1618 aa19.31■□□□□ 0.68
CLCF1-202ENST00000533438 ABCC2Q92887 1545 aa19.3■□□□□ 0.68
CLCF1-202ENST00000533438 UHRF1BP1LA0JNW5 1464 aa19.29■□□□□ 0.68
CLCF1-202ENST00000533438 PRXQ9BXM0 1461 aa19.29■□□□□ 0.68
CLCF1-202ENST00000533438 KDM4FA0A1W2PPD8 638 aa19.29■□□□□ 0.68
CLCF1-202ENST00000533438 TTBK1Q5TCY1 1321 aaPredicted RBP19.26■□□□□ 0.67
CLCF1-202ENST00000533438 UACAQ9BZF9 1416 aa19.25■□□□□ 0.67
CLCF1-202ENST00000533438 TSPOAP1O95153 1857 aa19.21■□□□□ 0.67
CLCF1-202ENST00000533438 KDM5BQ9UGL1 1544 aa19.2■□□□□ 0.66
CLCF1-202ENST00000533438 ASXL2Q76L83 1435 aa19.2■□□□□ 0.66
CLCF1-202ENST00000533438 PLB1Q6P1J6 1458 aa19.19■□□□□ 0.66
CLCF1-202ENST00000533438 KDM6BO15054 1643 aa19.18■□□□□ 0.66
CLCF1-202ENST00000533438 ZCCHC11Q5TAX3 1644 aaKnown RBP19.18■□□□□ 0.66
CLCF1-202ENST00000533438 GLI2P10070 1586 aa19.18■□□□□ 0.66
CLCF1-202ENST00000533438 GOLGA3Q08378 1498 aa19.17■□□□□ 0.66
CLCF1-202ENST00000533438 PPRC1Q5VV67 1664 aaKnown RBP19.14■□□□□ 0.66
CLCF1-202ENST00000533438 ABCA8O94911 1581 aa19.12■□□□□ 0.65
CLCF1-202ENST00000533438 CSRNP3Q8WYN3 585 aa19.12■□□□□ 0.65
CLCF1-202ENST00000533438 EEA1Q15075 1411 aa19.11■□□□□ 0.65
CLCF1-202ENST00000533438 EPRSP07814 1512 aaKnown RBP19.1■□□□□ 0.65
CLCF1-202ENST00000533438 MAP3K4Q9Y6R4 1608 aa19.09■□□□□ 0.65
CLCF1-202ENST00000533438 SAMD9Q5K651 1589 aa19.06■□□□□ 0.64
CLCF1-202ENST00000533438 COL17A1Q9UMD9 1497 aaPredicted RBP19.04■□□□□ 0.64
CLCF1-202ENST00000533438 WDR7Q9Y4E6 1490 aa19.04■□□□□ 0.64
CLCF1-202ENST00000533438 KIF21BO75037 1637 aa18.99■□□□□ 0.63
CLCF1-202ENST00000533438 TEX14Q8IWB6 1497 aa18.97■□□□□ 0.63
CLCF1-202ENST00000533438 CFAP43Q8NDM7 1665 aa18.97■□□□□ 0.63
CLCF1-202ENST00000533438 P3H3Q8IVL6 736 aa18.96■□□□□ 0.63
CLCF1-202ENST00000533438 RAPGEF6Q8TEU7 1601 aa18.94■□□□□ 0.62
CLCF1-202ENST00000533438 ADGRL1O94910 1474 aa18.94■□□□□ 0.62
CLCF1-202ENST00000533438 ATP10BO94823 1461 aa18.93■□□□□ 0.62
CLCF1-202ENST00000533438 ILDR1Q86SU0 546 aaPredicted RBP18.93■□□□□ 0.62
CLCF1-202ENST00000533438 FAM9AQ8IZU1 332 aaPredicted RBP18.93■□□□□ 0.62
CLCF1-202ENST00000533438 MAGI3Q5TCQ9 1506 aa18.91■□□□□ 0.62
CLCF1-202ENST00000533438 CHIC1Q5VXU3 224 aa18.9■□□□□ 0.62
CLCF1-202ENST00000533438 CD109Q6YHK3 1445 aa18.89■□□□□ 0.61
CLCF1-202ENST00000533438 KCNH8Q96L42 1107 aa18.88■□□□□ 0.61
CLCF1-202ENST00000533438 EFCAB5A4FU69 1503 aa18.87■□□□□ 0.61
CLCF1-202ENST00000533438 FHOD3Q2V2M9 1422 aa18.87■□□□□ 0.61
CLCF1-202ENST00000533438 NUP153P49790 1475 aaKnown RBP18.85■□□□□ 0.61
CLCF1-202ENST00000533438 ABCA9Q8IUA7 1624 aa18.85■□□□□ 0.61
CLCF1-202ENST00000533438 ARID3CA6NKF2 412 aa18.84■□□□□ 0.61
CLCF1-202ENST00000533438 RANGAP1P46060 587 aaPredicted RBP18.82■□□□□ 0.6
CLCF1-202ENST00000533438 ARAP3Q8WWN8 1544 aa18.76■□□□□ 0.59
CLCF1-202ENST00000533438 HECW2Q9P2P5 1572 aa18.74■□□□□ 0.59
CLCF1-202ENST00000533438 PHLDB1Q86UU1 1377 aa18.74■□□□□ 0.59
CLCF1-202ENST00000533438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.73■□□□□ 0.59
CLCF1-202ENST00000533438 HNRNPUL2Q1KMD3 747 aaKnown RBP18.73■□□□□ 0.59
CLCF1-202ENST00000533438 UBTFP17480 764 aaKnown RBP18.72■□□□□ 0.59
CLCF1-202ENST00000533438 ARHGAP35Q9NRY4 1499 aa18.71■□□□□ 0.59
CLCF1-202ENST00000533438 EHMT2Q96KQ7 1210 aa18.7■□□□□ 0.58
CLCF1-202ENST00000533438 NEO1Q92859 1461 aa18.7■□□□□ 0.58
CLCF1-202ENST00000533438 PLEKHD1A6NEE1 506 aa18.68■□□□□ 0.58
CLCF1-202ENST00000533438 CDK13Q14004 1512 aaKnown RBP18.68■□□□□ 0.58
CLCF1-202ENST00000533438 FMN1Q68DA7 1419 aa18.67■□□□□ 0.58
CLCF1-202ENST00000533438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.67■□□□□ 0.58
CLCF1-202ENST00000533438 HECW1Q76N89 1606 aa18.67■□□□□ 0.58
CLCF1-202ENST00000533438 FRMPD1Q5SYB0 1578 aa18.64■□□□□ 0.58
CLCF1-202ENST00000533438 TTC37Q6PGP7 1564 aa18.64■□□□□ 0.58
CLCF1-202ENST00000533438 CFAP74Q9C0B2 1584 aa18.62■□□□□ 0.57
CLCF1-202ENST00000533438 LRRIQ1Q96JM4 1722 aa18.61■□□□□ 0.57
CLCF1-202ENST00000533438 RICTORQ6R327 1708 aa18.6■□□□□ 0.57
CLCF1-202ENST00000533438 FANCAO15360 1455 aa18.58■□□□□ 0.57
CLCF1-202ENST00000533438 RAPGEF3O95398 923 aa18.58■□□□□ 0.56
CLCF1-202ENST00000533438 AKNAQ7Z591 1439 aa18.57■□□□□ 0.56
CLCF1-202ENST00000533438 FBXO41Q8TF61 875 aa18.56■□□□□ 0.56
CLCF1-202ENST00000533438 PTPRMP28827 1452 aa18.55■□□□□ 0.56
CLCF1-202ENST00000533438 ADAMTSL3P82987 1691 aa18.54■□□□□ 0.56
CLCF1-202ENST00000533438 DENND4BO75064 1496 aaPredicted RBP18.54■□□□□ 0.56
CLCF1-202ENST00000533438 PLCH2O75038 1416 aa18.53■□□□□ 0.56
CLCF1-202ENST00000533438 MYO5CQ9NQX4 1742 aa18.53■□□□□ 0.56
CLCF1-202ENST00000533438 ATP1B4Q9UN42 357 aaPredicted RBP18.53■□□□□ 0.56
CLCF1-202ENST00000533438 KIF14Q15058 1648 aa18.52■□□□□ 0.56
CLCF1-202ENST00000533438 PCF11O94913 1555 aaKnown RBP18.52■□□□□ 0.56
CLCF1-202ENST00000533438 ARHGEF40Q8TER5 1519 aa18.52■□□□□ 0.56
CLCF1-202ENST00000533438 ZMYM4Q5VZL5 1548 aa18.51■□□□□ 0.55
CLCF1-202ENST00000533438 TROQ12816 1431 aaPredicted RBP18.5■□□□□ 0.55
CLCF1-202ENST00000533438 CDK11AQ9UQ88 783 aaPredicted RBP18.5■□□□□ 0.55
CLCF1-202ENST00000533438 CASKIN1Q8WXD9 1431 aa18.49■□□□□ 0.55
CLCF1-202ENST00000533438 BCORL1Q5H9F3 1711 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms