RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 KIAA0586Q9BVV6 1533 aa20.72■□□□□ 0.91
SF3B2-213ENST00000533421 PRG4Q92954 1404 aaPredicted RBP20.71■□□□□ 0.91
SF3B2-213ENST00000533421 ERCC6L2Q5T890 1561 aa20.68■□□□□ 0.9
SF3B2-213ENST00000533421 TRHP20396 242 aaPredicted RBP20.67■□□□□ 0.9
SF3B2-213ENST00000533421 RAPGEF2Q9Y4G8 1499 aa20.63■□□□□ 0.89
SF3B2-213ENST00000533421 IQGAP2Q13576 1575 aa20.58■□□□□ 0.88
SF3B2-213ENST00000533421 CARMIL2Q6F5E8 1435 aa20.57■□□□□ 0.88
SF3B2-213ENST00000533421 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
SF3B2-213ENST00000533421 NPM1P06748 294 aaKnown RBP eCLIP20.51■□□□□ 0.87
SF3B2-213ENST00000533421 EEA1Q15075 1411 aa20.48■□□□□ 0.87
SF3B2-213ENST00000533421 TNIKQ9UKE5 1360 aa20.46■□□□□ 0.87
SF3B2-213ENST00000533421 PTPRGP23470 1445 aa20.46■□□□□ 0.87
SF3B2-213ENST00000533421 CTTNBP2Q8WZ74 1663 aa20.45■□□□□ 0.86
SF3B2-213ENST00000533421 PRXQ9BXM0 1461 aa20.45■□□□□ 0.86
SF3B2-213ENST00000533421 UGGT2Q9NYU1 1516 aa20.43■□□□□ 0.86
SF3B2-213ENST00000533421 CSRNP3Q8WYN3 585 aa20.41■□□□□ 0.86
SF3B2-213ENST00000533421 ADCY10Q96PN6 1610 aa20.4■□□□□ 0.86
SF3B2-213ENST00000533421 GOLGA3Q08378 1498 aa20.39■□□□□ 0.85
SF3B2-213ENST00000533421 MAPKBP1O60336 1514 aa20.37■□□□□ 0.85
SF3B2-213ENST00000533421 DISP1Q96F81 1524 aa20.37■□□□□ 0.85
SF3B2-213ENST00000533421 TTBK1Q5TCY1 1321 aaPredicted RBP20.36■□□□□ 0.85
SF3B2-213ENST00000533421 KIAA0556O60303 1618 aa20.36■□□□□ 0.85
SF3B2-213ENST00000533421 FAM9AQ8IZU1 332 aaPredicted RBP20.35■□□□□ 0.85
SF3B2-213ENST00000533421 KIF13AQ9H1H9 1805 aa20.32■□□□□ 0.84
SF3B2-213ENST00000533421 UHRF1BP1LA0JNW5 1464 aa20.31■□□□□ 0.84
SF3B2-213ENST00000533421 UACAQ9BZF9 1416 aa20.31■□□□□ 0.84
SF3B2-213ENST00000533421 ABCC2Q92887 1545 aa20.31■□□□□ 0.84
SF3B2-213ENST00000533421 ABCC10Q5T3U5 1492 aa20.29■□□□□ 0.84
SF3B2-213ENST00000533421 FAM69CQ0P6D2 419 aa20.26■□□□□ 0.83
SF3B2-213ENST00000533421 DIP2BQ9P265 1576 aa20.23■□□□□ 0.83
SF3B2-213ENST00000533421 PLB1Q6P1J6 1458 aa20.23■□□□□ 0.83
SF3B2-213ENST00000533421 KIF21BO75037 1637 aa20.22■□□□□ 0.83
SF3B2-213ENST00000533421 KDM5BQ9UGL1 1544 aa20.2■□□□□ 0.82
SF3B2-213ENST00000533421 EHMT2Q96KQ7 1210 aa20.19■□□□□ 0.82
SF3B2-213ENST00000533421 ASXL2Q76L83 1435 aa20.18■□□□□ 0.82
SF3B2-213ENST00000533421 ZCCHC11Q5TAX3 1644 aaKnown RBP20.15■□□□□ 0.82
SF3B2-213ENST00000533421 SAMD9Q5K651 1589 aa20.14■□□□□ 0.81
SF3B2-213ENST00000533421 ABCA8O94911 1581 aa20.13■□□□□ 0.81
SF3B2-213ENST00000533421 AEBP2Q6ZN18 517 aaPredicted RBP20.11■□□□□ 0.81
SF3B2-213ENST00000533421 GLI2P10070 1586 aa20.11■□□□□ 0.81
SF3B2-213ENST00000533421 P3H3Q8IVL6 736 aa20.09■□□□□ 0.81
SF3B2-213ENST00000533421 EFCAB5A4FU69 1503 aa20.07■□□□□ 0.8
SF3B2-213ENST00000533421 WDR7Q9Y4E6 1490 aa20.07■□□□□ 0.8
SF3B2-213ENST00000533421 UBTFP17480 764 aaKnown RBP20.07■□□□□ 0.8
SF3B2-213ENST00000533421 TSPOAP1O95153 1857 aa20.06■□□□□ 0.8
SF3B2-213ENST00000533421 EPRSP07814 1512 aaKnown RBP20.06■□□□□ 0.8
SF3B2-213ENST00000533421 RANGAP1P46060 587 aaPredicted RBP20.04■□□□□ 0.8
SF3B2-213ENST00000533421 RAPGEF6Q8TEU7 1601 aa20.02■□□□□ 0.8
SF3B2-213ENST00000533421 KDM6BO15054 1643 aa20.02■□□□□ 0.79
SF3B2-213ENST00000533421 TEX14Q8IWB6 1497 aa20■□□□□ 0.79
SF3B2-213ENST00000533421 MAP3K4Q9Y6R4 1608 aa19.99■□□□□ 0.79
SF3B2-213ENST00000533421 FHOD3Q2V2M9 1422 aa19.98■□□□□ 0.79
SF3B2-213ENST00000533421 ATP10BO94823 1461 aa19.95■□□□□ 0.78
SF3B2-213ENST00000533421 CFAP43Q8NDM7 1665 aa19.94■□□□□ 0.78
SF3B2-213ENST00000533421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.94■□□□□ 0.78
SF3B2-213ENST00000533421 HNRNPUL2Q1KMD3 747 aaKnown RBP19.94■□□□□ 0.78
SF3B2-213ENST00000533421 KCNH8Q96L42 1107 aa19.93■□□□□ 0.78
SF3B2-213ENST00000533421 PPRC1Q5VV67 1664 aaKnown RBP19.93■□□□□ 0.78
SF3B2-213ENST00000533421 FMN1Q68DA7 1419 aa19.92■□□□□ 0.78
SF3B2-213ENST00000533421 CD109Q6YHK3 1445 aa19.91■□□□□ 0.78
SF3B2-213ENST00000533421 ARID3CA6NKF2 412 aa19.9■□□□□ 0.78
SF3B2-213ENST00000533421 NUP153P49790 1475 aaKnown RBP19.9■□□□□ 0.78
SF3B2-213ENST00000533421 MAGI3Q5TCQ9 1506 aa19.88■□□□□ 0.77
SF3B2-213ENST00000533421 PLEKHD1A6NEE1 506 aa19.85■□□□□ 0.77
SF3B2-213ENST00000533421 ARHGAP35Q9NRY4 1499 aa19.85■□□□□ 0.77
SF3B2-213ENST00000533421 HECW1Q76N89 1606 aa19.83■□□□□ 0.76
SF3B2-213ENST00000533421 ABCA9Q8IUA7 1624 aa19.83■□□□□ 0.76
SF3B2-213ENST00000533421 PHLDB1Q86UU1 1377 aa19.8■□□□□ 0.76
SF3B2-213ENST00000533421 LOC105371045A0A1W2PR82 267 aa19.79■□□□□ 0.76
SF3B2-213ENST00000533421 ATP1B4Q9UN42 357 aaPredicted RBP19.78■□□□□ 0.76
SF3B2-213ENST00000533421 CDK11AQ9UQ88 783 aaPredicted RBP19.78■□□□□ 0.76
SF3B2-213ENST00000533421 KDM4FA0A1W2PPD8 638 aa19.74■□□□□ 0.75
SF3B2-213ENST00000533421 NEO1Q92859 1461 aa19.73■□□□□ 0.75
SF3B2-213ENST00000533421 COL17A1Q9UMD9 1497 aaPredicted RBP19.72■□□□□ 0.75
SF3B2-213ENST00000533421 CDK13Q14004 1512 aaKnown RBP19.71■□□□□ 0.75
SF3B2-213ENST00000533421 ARAP3Q8WWN8 1544 aa19.71■□□□□ 0.75
SF3B2-213ENST00000533421 CLIP1P30622 1438 aa19.71■□□□□ 0.75
SF3B2-213ENST00000533421 CFAP74Q9C0B2 1584 aa19.7■□□□□ 0.74
SF3B2-213ENST00000533421 CCDC18Q5T9S5 1454 aa19.68■□□□□ 0.74
SF3B2-213ENST00000533421 CASKIN1Q8WXD9 1431 aa19.68■□□□□ 0.74
SF3B2-213ENST00000533421 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.66■□□□□ 0.74
SF3B2-213ENST00000533421 FYCO1Q9BQS8 1478 aa19.64■□□□□ 0.73
SF3B2-213ENST00000533421 KIF14Q15058 1648 aa19.63■□□□□ 0.73
SF3B2-213ENST00000533421 PCF11O94913 1555 aaKnown RBP19.63■□□□□ 0.73
SF3B2-213ENST00000533421 FANCAO15360 1455 aa19.62■□□□□ 0.73
SF3B2-213ENST00000533421 TROQ12816 1431 aaPredicted RBP19.62■□□□□ 0.73
SF3B2-213ENST00000533421 TTC37Q6PGP7 1564 aa19.61■□□□□ 0.73
SF3B2-213ENST00000533421 AKNAQ7Z591 1439 aa19.59■□□□□ 0.73
SF3B2-213ENST00000533421 MYO5CQ9NQX4 1742 aa19.58■□□□□ 0.72
SF3B2-213ENST00000533421 PLCH2O75038 1416 aa19.58■□□□□ 0.72
SF3B2-213ENST00000533421 DENND4BO75064 1496 aaPredicted RBP19.57■□□□□ 0.72
SF3B2-213ENST00000533421 ADGRL1O94910 1474 aa19.57■□□□□ 0.72
SF3B2-213ENST00000533421 CEP162Q5TB80 1403 aa19.57■□□□□ 0.72
SF3B2-213ENST00000533421 LRRIQ1Q96JM4 1722 aa19.56■□□□□ 0.72
SF3B2-213ENST00000533421 RAPGEF3O95398 923 aa19.54■□□□□ 0.72
SF3B2-213ENST00000533421 EFCAB2Q5VUJ9 269 aa19.54■□□□□ 0.72
SF3B2-213ENST00000533421 ARHGAP5Q13017 1502 aa19.5■□□□□ 0.71
SF3B2-213ENST00000533421 FRMPD1Q5SYB0 1578 aa19.49■□□□□ 0.71
SF3B2-213ENST00000533421 RICTORQ6R327 1708 aa19.49■□□□□ 0.71
SF3B2-213ENST00000533421 SCAPERQ9BY12 1400 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms