RNA–Protein interactions for RNA: ENST00000533305.5

LMO7-224, Transcript of LIM domain 7, humanhuman

TSL 5

Gene LMO7, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-224ENST00000533305 HMGXB3Q12766 1538 aa12.44□□□□□ -0.42
LMO7-224ENST00000533305 RUSC2Q8N2Y8 1516 aa12.44□□□□□ -0.42
LMO7-224ENST00000533305 PRDM2Q13029 1718 aa12.42□□□□□ -0.42
LMO7-224ENST00000533305 FKBP8Q14318 412 aa12.41□□□□□ -0.42
LMO7-224ENST00000533305 VPS8Q8N3P4 1428 aa12.41□□□□□ -0.42
LMO7-224ENST00000533305 CCER1Q8TC90 406 aaPredicted RBP12.39□□□□□ -0.43
LMO7-224ENST00000533305 CLIP1P30622 1438 aa12.36□□□□□ -0.43
LMO7-224ENST00000533305 CLSPNQ9HAW4 1339 aa12.36□□□□□ -0.43
LMO7-224ENST00000533305 SPDYE2BA6NHP3 402 aa12.35□□□□□ -0.43
LMO7-224ENST00000533305 SPDYE4A6NLX3 237 aa12.35□□□□□ -0.43
LMO7-224ENST00000533305 SPDYE6P0CI01 402 aa12.35□□□□□ -0.43
LMO7-224ENST00000533305 SPDYE2Q495Y8 402 aa12.35□□□□□ -0.43
LMO7-224ENST00000533305 NCAPD3P42695 1498 aa12.34□□□□□ -0.43
LMO7-224ENST00000533305 PRXQ9BXM0 1461 aa12.34□□□□□ -0.43
LMO7-224ENST00000533305 ACIN1Q9UKV3 1341 aaKnown RBP12.32□□□□□ -0.44
LMO7-224ENST00000533305 RAPGEF2Q9Y4G8 1499 aa12.28□□□□□ -0.44
LMO7-224ENST00000533305 UBTFP17480 764 aaKnown RBP12.28□□□□□ -0.44
LMO7-224ENST00000533305 DIEXFQ68CQ4 756 aaKnown RBP12.28□□□□□ -0.44
LMO7-224ENST00000533305 PROM2Q8N271 834 aa12.27□□□□□ -0.45
LMO7-224ENST00000533305 RBM42Q9BTD8 480 aaKnown RBP12.27□□□□□ -0.45
LMO7-224ENST00000533305 CUX2O14529 1486 aa12.27□□□□□ -0.45
LMO7-224ENST00000533305 CENPBP07199 599 aaPredicted RBP12.26□□□□□ -0.45
LMO7-224ENST00000533305 ZNF316A6NFI3 1004 aaPredicted RBP12.25□□□□□ -0.45
LMO7-224ENST00000533305 MAP3K1Q13233 1512 aa12.25□□□□□ -0.45
LMO7-224ENST00000533305 OSCARQ8IYS5 282 aa12.24□□□□□ -0.45
LMO7-224ENST00000533305 CFTRP13569 1480 aa12.23□□□□□ -0.45
LMO7-224ENST00000533305 SSUH2Q9Y2M2 353 aa12.22□□□□□ -0.45
LMO7-224ENST00000533305 ZNF692Q9BU19 519 aaPredicted RBP12.21□□□□□ -0.45
LMO7-224ENST00000533305 ARAP1Q96P48 1450 aa12.21□□□□□ -0.46
LMO7-224ENST00000533305 RRBP1Q9P2E9 1410 aaKnown RBP12.2□□□□□ -0.46
LMO7-224ENST00000533305 CUX1P39880 1505 aa12.2□□□□□ -0.46
LMO7-224ENST00000533305 PABPN1Q86U42 306 aaKnown RBP eCLIP12.18□□□□□ -0.46
LMO7-224ENST00000533305 KIF27Q86VH2 1401 aa12.18□□□□□ -0.46
LMO7-224ENST00000533305 NEUROD1Q13562 356 aa12.16□□□□□ -0.46
LMO7-224ENST00000533305 FBXO3Q9UK99 471 aa12.16□□□□□ -0.46
LMO7-224ENST00000533305 AKT1S1Q96B36 256 aa12.1□□□□□ -0.47
LMO7-224ENST00000533305 ARHGAP35Q9NRY4 1499 aa12.08□□□□□ -0.47
LMO7-224ENST00000533305 DHX57Q6P158 1386 aaKnown RBP12.08□□□□□ -0.48
LMO7-224ENST00000533305 CFAP43Q8NDM7 1665 aa12.07□□□□□ -0.48
LMO7-224ENST00000533305 MYT1Q01538 1121 aa12.07□□□□□ -0.48
LMO7-224ENST00000533305 TIAM1Q13009 1591 aa12.05□□□□□ -0.48
LMO7-224ENST00000533305 STAG3Q9UJ98 1225 aa12.05□□□□□ -0.48
LMO7-224ENST00000533305 GTF3C3Q9Y5Q9 886 aa12.03□□□□□ -0.48
LMO7-224ENST00000533305 CC2D2AQ9P2K1 1620 aa12.03□□□□□ -0.48
LMO7-224ENST00000533305 CCNB3Q8WWL7 1395 aa12.01□□□□□ -0.49
LMO7-224ENST00000533305 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.01□□□□□ -0.49
LMO7-224ENST00000533305 AQRO60306 1485 aaKnown RBP eCLIP12□□□□□ -0.496e-8■□□□□ 9.3
LMO7-224ENST00000533305 EFCAB5A4FU69 1503 aa12□□□□□ -0.49
LMO7-224ENST00000533305 CUL7Q14999 1698 aa12□□□□□ -0.49
LMO7-224ENST00000533305 FHAD1B1AJZ9 1412 aa11.99□□□□□ -0.49
LMO7-224ENST00000533305 IGF1RP08069 1367 aa11.98□□□□□ -0.49
LMO7-224ENST00000533305 CADPSQ9ULU8 1353 aa11.98□□□□□ -0.49
LMO7-224ENST00000533305 CTTNBP2Q8WZ74 1663 aa11.97□□□□□ -0.49
LMO7-224ENST00000533305 LRRC9Q6ZRR7 1453 aa11.95□□□□□ -0.5
LMO7-224ENST00000533305 TIMELESSQ9UNS1 1208 aa11.95□□□□□ -0.5
LMO7-224ENST00000533305 DNMBPQ6XZF7 1577 aa11.95□□□□□ -0.5
LMO7-224ENST00000533305 WDR97A6NE52 1622 aa11.94□□□□□ -0.5
LMO7-224ENST00000533305 MIER1Q8N108 512 aa11.94□□□□□ -0.5
LMO7-224ENST00000533305 MAPKBP1O60336 1514 aa11.93□□□□□ -0.5
LMO7-224ENST00000533305 ABCA10Q8WWZ4 1543 aa11.93□□□□□ -0.5
LMO7-224ENST00000533305 FGD5Q6ZNL6 1462 aa11.93□□□□□ -0.5
LMO7-224ENST00000533305 KIF21AQ7Z4S6 1674 aa11.93□□□□□ -0.5
LMO7-224ENST00000533305 TTBK1Q5TCY1 1321 aaPredicted RBP11.92□□□□□ -0.5
LMO7-224ENST00000533305 FYCO1Q9BQS8 1478 aa11.92□□□□□ -0.5
LMO7-224ENST00000533305 KANK4Q5T7N3 995 aaPredicted RBP11.92□□□□□ -0.5
LMO7-224ENST00000533305 SPDYE1Q8NFV5 336 aaPredicted RBP11.92□□□□□ -0.5
LMO7-224ENST00000533305 CARMIL1Q5VZK9 1371 aa11.92□□□□□ -0.5
LMO7-224ENST00000533305 THOC2Q8NI27 1593 aaKnown RBP11.9□□□□□ -0.5
LMO7-224ENST00000533305 PCF11O94913 1555 aaKnown RBP11.88□□□□□ -0.51
LMO7-224ENST00000533305 SETD5Q9C0A6 1442 aa11.88□□□□□ -0.51
LMO7-224ENST00000533305 REM2Q8IYK8 340 aaPredicted RBP11.88□□□□□ -0.51
LMO7-224ENST00000533305 POTEHQ6S545 545 aa11.87□□□□□ -0.51
LMO7-224ENST00000533305 CASKIN1Q8WXD9 1431 aa11.86□□□□□ -0.51
LMO7-224ENST00000533305 SAMD9Q5K651 1589 aa11.85□□□□□ -0.51
LMO7-224ENST00000533305 LAMC3Q9Y6N6 1575 aa11.85□□□□□ -0.51
LMO7-224ENST00000533305 RAB3GAP2Q9H2M9 1393 aa11.85□□□□□ -0.51
LMO7-224ENST00000533305 VASPP50552 380 aaPredicted RBP11.85□□□□□ -0.51
LMO7-224ENST00000533305 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.52
LMO7-224ENST00000533305 ABCA5Q8WWZ7 1642 aa11.82□□□□□ -0.52
LMO7-224ENST00000533305 TOPBP1Q92547 1522 aa11.82□□□□□ -0.52
LMO7-224ENST00000533305 FMN1Q68DA7 1419 aa11.81□□□□□ -0.52
LMO7-224ENST00000533305 POLA1P09884 1462 aaPredicted RBP11.8□□□□□ -0.52
LMO7-224ENST00000533305 SNAPC4Q5SXM2 1469 aa11.8□□□□□ -0.52
LMO7-224ENST00000533305 PHLDB1Q86UU1 1377 aa11.79□□□□□ -0.52
LMO7-224ENST00000533305 LRRIQ1Q96JM4 1722 aa11.77□□□□□ -0.52
LMO7-224ENST00000533305 PLEKHG5O94827 1062 aa11.77□□□□□ -0.53
LMO7-224ENST00000533305 ARHGEF11O15085 1522 aa11.76□□□□□ -0.53
LMO7-224ENST00000533305 SUPT6HQ7KZ85 1726 aaKnown RBP11.75□□□□□ -0.53
LMO7-224ENST00000533305 AKNAQ7Z591 1439 aa11.75□□□□□ -0.53
LMO7-224ENST00000533305 GCC2Q8IWJ2 1684 aa11.75□□□□□ -0.53
LMO7-224ENST00000533305 ZBTB47Q9UFB7 747 aaPredicted RBP11.74□□□□□ -0.53
LMO7-224ENST00000533305 HFM1A2PYH4 1435 aa11.74□□□□□ -0.53
LMO7-224ENST00000533305 EHBP1L1Q8N3D4 1523 aa11.74□□□□□ -0.53
LMO7-224ENST00000533305 FGD6Q6ZV73 1430 aa11.73□□□□□ -0.53
LMO7-224ENST00000533305 PTPN23Q9H3S7 1636 aa11.72□□□□□ -0.53
LMO7-224ENST00000533305 GRIN2BQ13224 1484 aa11.72□□□□□ -0.53
LMO7-224ENST00000533305 AMER1Q5JTC6 1135 aaPredicted RBP11.72□□□□□ -0.53
LMO7-224ENST00000533305 UACAQ9BZF9 1416 aa11.71□□□□□ -0.53
LMO7-224ENST00000533305 PRR29P0C7W0 189 aa11.71□□□□□ -0.53
LMO7-224ENST00000533305 PITPNM1O00562 1244 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms