RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 MROH2BQ7Z745 1585 aa9.47□□□□□ -0.89
TGFBR3-210ENST00000533089 PLEKHG5O94827 1062 aa9.46□□□□□ -0.89
TGFBR3-210ENST00000533089 WRNQ14191 1432 aaPredicted RBP eCLIP9.45□□□□□ -0.9
TGFBR3-210ENST00000533089 CANXP27824 592 aaKnown RBP9.45□□□□□ -0.9
TGFBR3-210ENST00000533089 P3H3Q8IVL6 736 aa9.43□□□□□ -0.9
TGFBR3-210ENST00000533089 TRIM44Q96DX7 344 aaPredicted RBP9.43□□□□□ -0.9
TGFBR3-210ENST00000533089 ATAD2BQ9ULI0 1458 aa9.43□□□□□ -0.9
TGFBR3-210ENST00000533089 HSP90AA1P07900 732 aaKnown RBP9.43□□□□□ -0.9
TGFBR3-210ENST00000533089 ESF1Q9H501 851 aaKnown RBP9.43□□□□□ -0.9
TGFBR3-210ENST00000533089 NPM1P06748 294 aaKnown RBP eCLIP9.42□□□□□ -0.9
TGFBR3-210ENST00000533089 ARID4BQ4LE39 1312 aaPredicted RBP9.42□□□□□ -0.9
TGFBR3-210ENST00000533089 EEA1Q15075 1411 aa9.41□□□□□ -0.9
TGFBR3-210ENST00000533089 CADPSQ9ULU8 1353 aa9.39□□□□□ -0.91
TGFBR3-210ENST00000533089 ZNF777Q9ULD5 760 aaPredicted RBP9.39□□□□□ -0.91
TGFBR3-210ENST00000533089 TOP2AP11388 1531 aaKnown RBP9.38□□□□□ -0.91
TGFBR3-210ENST00000533089 KIF27Q86VH2 1401 aa9.38□□□□□ -0.91
TGFBR3-210ENST00000533089 STAG3Q9UJ98 1225 aa9.37□□□□□ -0.91
TGFBR3-210ENST00000533089 SMARCA4P51532 1647 aa9.37□□□□□ -0.91
TGFBR3-210ENST00000533089 ANP32CO43423 234 aa9.37□□□□□ -0.91
TGFBR3-210ENST00000533089 CCDC88BA6NC98 1476 aa9.36□□□□□ -0.91
TGFBR3-210ENST00000533089 CHGAP10645 457 aaKnown RBP9.35□□□□□ -0.91
TGFBR3-210ENST00000533089 SENP3Q9H4L4 574 aaPredicted RBP9.35□□□□□ -0.91
TGFBR3-210ENST00000533089 TIMELESSQ9UNS1 1208 aa9.35□□□□□ -0.91
TGFBR3-210ENST00000533089 NCAPD3P42695 1498 aa9.34□□□□□ -0.91
TGFBR3-210ENST00000533089 HSP90AA2PQ14568 343 aaPredicted RBP9.34□□□□□ -0.91
TGFBR3-210ENST00000533089 NOP58Q9Y2X3 529 aaKnown RBP9.34□□□□□ -0.91
TGFBR3-210ENST00000533089 EIF4G1Q04637 1599 aaKnown RBP9.32□□□□□ -0.92
TGFBR3-210ENST00000533089 LAS1LQ9Y4W2 734 aaKnown RBP9.31□□□□□ -0.92
TGFBR3-210ENST00000533089 PDE4CQ08493 712 aa9.3□□□□□ -0.92
TGFBR3-210ENST00000533089 ARID3AQ99856 593 aa9.3□□□□□ -0.92
TGFBR3-210ENST00000533089 SALL2Q9Y467 1007 aaPredicted RBP9.3□□□□□ -0.92
TGFBR3-210ENST00000533089 RSPH6AQ9H0K4 717 aa9.29□□□□□ -0.92
TGFBR3-210ENST00000533089 SUPT16HQ9Y5B9 1047 aaKnown RBP9.28□□□□□ -0.92
TGFBR3-210ENST00000533089 CEP164Q9UPV0 1460 aa9.27□□□□□ -0.92
TGFBR3-210ENST00000533089 RBM19Q9Y4C8 960 aaKnown RBP9.27□□□□□ -0.93
TGFBR3-210ENST00000533089 CUX2O14529 1486 aa9.26□□□□□ -0.93
TGFBR3-210ENST00000533089 PPM1GO15355 546 aaPredicted RBP9.26□□□□□ -0.93
TGFBR3-210ENST00000533089 GOLGA3Q08378 1498 aa9.26□□□□□ -0.93
TGFBR3-210ENST00000533089 TNNT3P45378 269 aaPredicted RBP9.25□□□□□ -0.93
TGFBR3-210ENST00000533089 IRX6P78412 446 aaPredicted RBP9.25□□□□□ -0.93
TGFBR3-210ENST00000533089 WIZO95785 1651 aa9.25□□□□□ -0.93
TGFBR3-210ENST00000533089 ZBTB7CA1YPR0 619 aa9.25□□□□□ -0.93
TGFBR3-210ENST00000533089 ABCC8Q09428 1581 aa9.25□□□□□ -0.93
TGFBR3-210ENST00000533089 SOGA1O94964 1423 aa9.24□□□□□ -0.93
TGFBR3-210ENST00000533089 APPP05067 770 aa9.24□□□□□ -0.93
TGFBR3-210ENST00000533089 TSHZ2Q9NRE2 1034 aa9.24□□□□□ -0.93
TGFBR3-210ENST00000533089 UBE2Q2Q8WVN8 375 aa9.24□□□□□ -0.93
TGFBR3-210ENST00000533089 DNTTIP2Q5QJE6 756 aaKnown RBP9.24□□□□□ -0.93
TGFBR3-210ENST00000533089 MIER1Q8N108 512 aa9.24□□□□□ -0.93
TGFBR3-210ENST00000533089 HAP1P54257 671 aaPredicted RBP9.23□□□□□ -0.93
TGFBR3-210ENST00000533089 FANCD2Q9BXW9 1451 aa9.23□□□□□ -0.93
TGFBR3-210ENST00000533089 CLIP1P30622 1438 aa9.22□□□□□ -0.93
TGFBR3-210ENST00000533089 CARMIL1Q5VZK9 1371 aa9.21□□□□□ -0.93
TGFBR3-210ENST00000533089 PNNQ9H307 717 aaKnown RBP9.21□□□□□ -0.93
TGFBR3-210ENST00000533089 DDRGK1Q96HY6 314 aa9.21□□□□□ -0.94
TGFBR3-210ENST00000533089 TAOK2Q9UL54 1235 aa9.21□□□□□ -0.94
TGFBR3-210ENST00000533089 PTMSP20962 102 aa9.2□□□□□ -0.94
TGFBR3-210ENST00000533089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.2□□□□□ -0.946e-8■■□□□ 12.3
TGFBR3-210ENST00000533089 HMGXB3Q12766 1538 aa9.19□□□□□ -0.94
TGFBR3-210ENST00000533089 PLEKHD1A6NEE1 506 aa9.19□□□□□ -0.94
TGFBR3-210ENST00000533089 TDRD9Q8NDG6 1382 aaKnown RBP9.18□□□□□ -0.94
TGFBR3-210ENST00000533089 TPRNQ4KMQ1 711 aa9.18□□□□□ -0.94
TGFBR3-210ENST00000533089 MTUS2Q5JR59 1369 aa9.18□□□□□ -0.94
TGFBR3-210ENST00000533089 CC2D2AQ9P2K1 1620 aa9.17□□□□□ -0.94
TGFBR3-210ENST00000533089 BICRAQ9NZM4 1560 aa9.17□□□□□ -0.94
TGFBR3-210ENST00000533089 UPF2Q9HAU5 1272 aaKnown RBP9.16□□□□□ -0.94
TGFBR3-210ENST00000533089 TNIKQ9UKE5 1360 aa9.16□□□□□ -0.94
TGFBR3-210ENST00000533089 KCNH8Q96L42 1107 aa9.15□□□□□ -0.94
TGFBR3-210ENST00000533089 HNRNPUQ00839 825 aaKnown RBP eCLIP9.15□□□□□ -0.945e-6■□□□□ 10.8
TGFBR3-210ENST00000533089 CARMIL2Q6F5E8 1435 aa9.15□□□□□ -0.95
TGFBR3-210ENST00000533089 PTMAP06454 111 aaKnown RBP9.14□□□□□ -0.95
TGFBR3-210ENST00000533089 C14orf37Q86TY3 774 aa9.14□□□□□ -0.95
TGFBR3-210ENST00000533089 USP35Q9P2H5 1018 aa9.14□□□□□ -0.95
TGFBR3-210ENST00000533089 L1TD1Q5T7N2 865 aaKnown RBP9.13□□□□□ -0.95
TGFBR3-210ENST00000533089 TSPY4P0CV99 314 aa9.12□□□□□ -0.95
TGFBR3-210ENST00000533089 TSPY10P0CW01 314 aa9.12□□□□□ -0.95
TGFBR3-210ENST00000533089 CALRP27797 417 aaKnown RBP9.12□□□□□ -0.95
TGFBR3-210ENST00000533089 CEP162Q5TB80 1403 aa9.11□□□□□ -0.95
TGFBR3-210ENST00000533089 CFTRP13569 1480 aa9.11□□□□□ -0.95
TGFBR3-210ENST00000533089 MSNP26038 577 aaKnown RBP9.11□□□□□ -0.95
TGFBR3-210ENST00000533089 CHIC2Q9UKJ5 165 aa9.11□□□□□ -0.95
TGFBR3-210ENST00000533089 TONSLQ96HA7 1378 aa9.1□□□□□ -0.95
TGFBR3-210ENST00000533089 FHAD1B1AJZ9 1412 aa9.1□□□□□ -0.95
TGFBR3-210ENST00000533089 PDIA4P13667 645 aaKnown RBP9.09□□□□□ -0.95
TGFBR3-210ENST00000533089 FAM9BQ8IZU0 186 aa9.09□□□□□ -0.95
TGFBR3-210ENST00000533089 KDM2AQ9Y2K7 1162 aa9.08□□□□□ -0.96
TGFBR3-210ENST00000533089 TRHP20396 242 aaPredicted RBP9.08□□□□□ -0.96
TGFBR3-210ENST00000533089 MRC2Q9UBG0 1479 aa9.08□□□□□ -0.96
TGFBR3-210ENST00000533089 PPP1R15AO75807 674 aaPredicted RBP9.07□□□□□ -0.96
TGFBR3-210ENST00000533089 BECN1Q14457 450 aa9.07□□□□□ -0.96
TGFBR3-210ENST00000533089 OSCARQ8IYS5 282 aa9.07□□□□□ -0.96
TGFBR3-210ENST00000533089 RAPGEF2Q9Y4G8 1499 aa9.06□□□□□ -0.96
TGFBR3-210ENST00000533089 WDR43Q15061 677 aaKnown RBP eCLIP9.06□□□□□ -0.96
TGFBR3-210ENST00000533089 DNAJC5BQ9UF47 199 aa9.05□□□□□ -0.96
TGFBR3-210ENST00000533089 FGD5Q6ZNL6 1462 aa9.05□□□□□ -0.96
TGFBR3-210ENST00000533089 IL27Q8NEV9 243 aa9.04□□□□□ -0.96
TGFBR3-210ENST00000533089 CFDP1Q9UEE9 299 aaPredicted RBP9.04□□□□□ -0.96
TGFBR3-210ENST00000533089 TMC1Q8TDI8 760 aa9.03□□□□□ -0.96
TGFBR3-210ENST00000533089 PATL2C9JE40 543 aaKnown RBP9.02□□□□□ -0.97
TGFBR3-210ENST00000533089 CLSTN1O94985 981 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms