RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 TRHP20396 242 aaPredicted RBP30.86■■■□□ 2.53
SMG1-203ENST00000532700 JPH4Q96JJ6 628 aa30.83■■■□□ 2.53
SMG1-203ENST00000532700 CARMIL1Q5VZK9 1371 aa30.79■■■□□ 2.52
SMG1-203ENST00000532700 KIAA0586Q9BVV6 1533 aa30.78■■■□□ 2.52
SMG1-203ENST00000532700 ADCY10Q96PN6 1610 aa30.62■■■□□ 2.49
SMG1-203ENST00000532700 IQGAP2Q13576 1575 aa30.61■■■□□ 2.49
SMG1-203ENST00000532700 RAPGEF2Q9Y4G8 1499 aa30.57■■■□□ 2.48
SMG1-203ENST00000532700 KIF13AQ9H1H9 1805 aa30.56■■■□□ 2.48
SMG1-203ENST00000532700 DISP1Q96F81 1524 aa30.48■■■□□ 2.47
SMG1-203ENST00000532700 CTTNBP2Q8WZ74 1663 aa30.46■■■□□ 2.47
SMG1-203ENST00000532700 TTBK1Q5TCY1 1321 aaPredicted RBP30.42■■■□□ 2.46
SMG1-203ENST00000532700 UGGT2Q9NYU1 1516 aa30.42■■■□□ 2.46
SMG1-203ENST00000532700 PRXQ9BXM0 1461 aa30.41■■■□□ 2.46
SMG1-203ENST00000532700 MAPKBP1O60336 1514 aa30.4■■■□□ 2.46
SMG1-203ENST00000532700 PTPRGP23470 1445 aa30.39■■■□□ 2.46
SMG1-203ENST00000532700 KIAA0556O60303 1618 aa30.37■■■□□ 2.45
SMG1-203ENST00000532700 TNIKQ9UKE5 1360 aa30.37■■■□□ 2.45
SMG1-203ENST00000532700 CARMIL2Q6F5E8 1435 aa30.37■■■□□ 2.45
SMG1-203ENST00000532700 DIP2BQ9P265 1576 aa30.35■■■□□ 2.45
SMG1-203ENST00000532700 ABCC10Q5T3U5 1492 aa30.31■■■□□ 2.44
SMG1-203ENST00000532700 ABCC2Q92887 1545 aa30.25■■■□□ 2.43
SMG1-203ENST00000532700 NPM1P06748 294 aaKnown RBP eCLIP30.23■■■□□ 2.43
SMG1-203ENST00000532700 UHRF1BP1LA0JNW5 1464 aa30.22■■■□□ 2.43
SMG1-203ENST00000532700 UACAQ9BZF9 1416 aa30.21■■■□□ 2.43
SMG1-203ENST00000532700 FAM69CQ0P6D2 419 aa30.2■■■□□ 2.43
SMG1-203ENST00000532700 TSPOAP1O95153 1857 aa30.15■■■□□ 2.42
SMG1-203ENST00000532700 ZCCHC11Q5TAX3 1644 aaKnown RBP30.14■■■□□ 2.42
SMG1-203ENST00000532700 CSRNP3Q8WYN3 585 aa30.14■■■□□ 2.42
SMG1-203ENST00000532700 ASXL2Q76L83 1435 aa30.13■■■□□ 2.41
SMG1-203ENST00000532700 PLB1Q6P1J6 1458 aa30.12■■■□□ 2.41
SMG1-203ENST00000532700 KDM5BQ9UGL1 1544 aa30.12■■■□□ 2.41
SMG1-203ENST00000532700 GOLGA3Q08378 1498 aa30.07■■■□□ 2.4
SMG1-203ENST00000532700 ABCA8O94911 1581 aa30.07■■■□□ 2.4
SMG1-203ENST00000532700 FAM9AQ8IZU1 332 aaPredicted RBP30.06■■■□□ 2.4
SMG1-203ENST00000532700 PPRC1Q5VV67 1664 aaKnown RBP30.06■■■□□ 2.4
SMG1-203ENST00000532700 EEA1Q15075 1411 aa30.04■■■□□ 2.4
SMG1-203ENST00000532700 SAMD9Q5K651 1589 aa30.03■■■□□ 2.4
SMG1-203ENST00000532700 GLI2P10070 1586 aa30■■■□□ 2.39
SMG1-203ENST00000532700 CHIC1Q5VXU3 224 aa30■■■□□ 2.39
SMG1-203ENST00000532700 EPRSP07814 1512 aaKnown RBP29.96■■■□□ 2.39
SMG1-203ENST00000532700 P3H3Q8IVL6 736 aa29.96■■■□□ 2.39
SMG1-203ENST00000532700 KIF21BO75037 1637 aa29.96■■■□□ 2.39
SMG1-203ENST00000532700 KDM6BO15054 1643 aa29.93■■■□□ 2.38
SMG1-203ENST00000532700 MAP3K4Q9Y6R4 1608 aa29.93■■■□□ 2.38
SMG1-203ENST00000532700 WDR7Q9Y4E6 1490 aa29.87■■■□□ 2.37
SMG1-203ENST00000532700 RANGAP1P46060 587 aaPredicted RBP29.83■■■□□ 2.37
SMG1-203ENST00000532700 ARID3CA6NKF2 412 aa29.81■■■□□ 2.36
SMG1-203ENST00000532700 RAPGEF6Q8TEU7 1601 aa29.8■■■□□ 2.36
SMG1-203ENST00000532700 FHOD3Q2V2M9 1422 aa29.79■■■□□ 2.36
SMG1-203ENST00000532700 EHMT2Q96KQ7 1210 aa29.79■■■□□ 2.36
SMG1-203ENST00000532700 ATP10BO94823 1461 aa29.77■■■□□ 2.36
SMG1-203ENST00000532700 COL17A1Q9UMD9 1497 aaPredicted RBP29.77■■■□□ 2.36
SMG1-203ENST00000532700 CFAP43Q8NDM7 1665 aa29.71■■■□□ 2.35
SMG1-203ENST00000532700 NUP153P49790 1475 aaKnown RBP29.7■■■□□ 2.35
SMG1-203ENST00000532700 KCNH8Q96L42 1107 aa29.67■■■□□ 2.34
SMG1-203ENST00000532700 EFCAB5A4FU69 1503 aa29.66■■■□□ 2.34
SMG1-203ENST00000532700 TEX14Q8IWB6 1497 aa29.62■■■□□ 2.33
SMG1-203ENST00000532700 CD109Q6YHK3 1445 aa29.61■■■□□ 2.33
SMG1-203ENST00000532700 MAGI3Q5TCQ9 1506 aa29.6■■■□□ 2.33
SMG1-203ENST00000532700 ABCA9Q8IUA7 1624 aa29.57■■■□□ 2.32
SMG1-203ENST00000532700 AEBP2Q6ZN18 517 aaPredicted RBP29.57■■■□□ 2.32
SMG1-203ENST00000532700 ARHGAP35Q9NRY4 1499 aa29.56■■■□□ 2.32
SMG1-203ENST00000532700 UBTFP17480 764 aaKnown RBP29.55■■■□□ 2.32
SMG1-203ENST00000532700 CDK13Q14004 1512 aaKnown RBP29.5■■■□□ 2.31
SMG1-203ENST00000532700 KDM4FA0A1W2PPD8 638 aa29.48■■■□□ 2.31
SMG1-203ENST00000532700 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.45■■■□□ 2.31
SMG1-203ENST00000532700 HNRNPUL2Q1KMD3 747 aaKnown RBP29.45■■■□□ 2.31
SMG1-203ENST00000532700 LRRIQ1Q96JM4 1722 aa29.44■■■□□ 2.3
SMG1-203ENST00000532700 TTC37Q6PGP7 1564 aa29.39■■■□□ 2.3
SMG1-203ENST00000532700 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.37■■■□□ 2.29
SMG1-203ENST00000532700 HECW1Q76N89 1606 aa29.37■■■□□ 2.29
SMG1-203ENST00000532700 ARAP3Q8WWN8 1544 aa29.36■■■□□ 2.29
SMG1-203ENST00000532700 ADGRL1O94910 1474 aa29.35■■■□□ 2.29
SMG1-203ENST00000532700 FRMPD1Q5SYB0 1578 aa29.34■■■□□ 2.29
SMG1-203ENST00000532700 FMN1Q68DA7 1419 aa29.33■■■□□ 2.29
SMG1-203ENST00000532700 PCF11O94913 1555 aaKnown RBP29.29■■■□□ 2.28
SMG1-203ENST00000532700 PLEKHD1A6NEE1 506 aa29.28■■■□□ 2.28
SMG1-203ENST00000532700 NEO1Q92859 1461 aa29.27■■■□□ 2.28
SMG1-203ENST00000532700 KIF14Q15058 1648 aa29.25■■■□□ 2.27
SMG1-203ENST00000532700 ATP1B4Q9UN42 357 aaPredicted RBP29.24■■■□□ 2.27
SMG1-203ENST00000532700 RAPGEF3O95398 923 aa29.22■■■□□ 2.27
SMG1-203ENST00000532700 RICTORQ6R327 1708 aa29.2■■■□□ 2.26
SMG1-203ENST00000532700 FANCAO15360 1455 aa29.17■■■□□ 2.26
SMG1-203ENST00000532700 PHLDB1Q86UU1 1377 aa29.16■■■□□ 2.26
SMG1-203ENST00000532700 CFAP74Q9C0B2 1584 aa29.14■■■□□ 2.26
SMG1-203ENST00000532700 AKNAQ7Z591 1439 aa29.14■■■□□ 2.26
SMG1-203ENST00000532700 CLIP1P30622 1438 aa29.13■■■□□ 2.25
SMG1-203ENST00000532700 CASKIN1Q8WXD9 1431 aa29.13■■■□□ 2.25
SMG1-203ENST00000532700 MYO5CQ9NQX4 1742 aa29.13■■■□□ 2.25
SMG1-203ENST00000532700 TROQ12816 1431 aaPredicted RBP29.1■■■□□ 2.25
SMG1-203ENST00000532700 PLCH2O75038 1416 aa29.08■■■□□ 2.25
SMG1-203ENST00000532700 DENND4BO75064 1496 aaPredicted RBP29.07■■■□□ 2.24
SMG1-203ENST00000532700 SIGLEC1Q9BZZ2 1709 aa29.07■■■□□ 2.24
SMG1-203ENST00000532700 ARHGEF40Q8TER5 1519 aa29.05■■■□□ 2.24
SMG1-203ENST00000532700 FYCO1Q9BQS8 1478 aa29.04■■■□□ 2.24
SMG1-203ENST00000532700 ZMYM4Q5VZL5 1548 aa29.02■■■□□ 2.24
SMG1-203ENST00000532700 CDC42BPBQ9Y5S2 1711 aa29.02■■■□□ 2.24
SMG1-203ENST00000532700 CCDC18Q5T9S5 1454 aa29.02■■■□□ 2.24
SMG1-203ENST00000532700 ADAMTSL3P82987 1691 aa28.99■■■□□ 2.23
SMG1-203ENST00000532700 YEATS2Q9ULM3 1422 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms