RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 PRG4Q92954 1404 aaPredicted RBP32.85■■■□□ 2.85
SSH3-209ENST00000532600 JPH4Q96JJ6 628 aa32.85■■■□□ 2.85
SSH3-209ENST00000532600 CARMIL1Q5VZK9 1371 aa32.75■■■□□ 2.83
SSH3-209ENST00000532600 KIAA0586Q9BVV6 1533 aa32.75■■■□□ 2.83
SSH3-209ENST00000532600 ADCY10Q96PN6 1610 aa32.5■■■□□ 2.79
SSH3-209ENST00000532600 RAPGEF2Q9Y4G8 1499 aa32.49■■■□□ 2.79
SSH3-209ENST00000532600 IQGAP2Q13576 1575 aa32.49■■■□□ 2.79
SSH3-209ENST00000532600 KIF13AQ9H1H9 1805 aa32.42■■■□□ 2.78
SSH3-209ENST00000532600 DISP1Q96F81 1524 aa32.37■■■□□ 2.77
SSH3-209ENST00000532600 PTPRGP23470 1445 aa32.35■■■□□ 2.77
SSH3-209ENST00000532600 MAPKBP1O60336 1514 aa32.35■■■□□ 2.77
SSH3-209ENST00000532600 CARMIL2Q6F5E8 1435 aa32.34■■■□□ 2.77
SSH3-209ENST00000532600 TNIKQ9UKE5 1360 aa32.33■■■□□ 2.77
SSH3-209ENST00000532600 UGGT2Q9NYU1 1516 aa32.31■■■□□ 2.76
SSH3-209ENST00000532600 PRXQ9BXM0 1461 aa32.29■■■□□ 2.76
SSH3-209ENST00000532600 ABCC10Q5T3U5 1492 aa32.28■■■□□ 2.76
SSH3-209ENST00000532600 TTBK1Q5TCY1 1321 aaPredicted RBP32.27■■■□□ 2.76
SSH3-209ENST00000532600 NPM1P06748 294 aaKnown RBP eCLIP32.27■■■□□ 2.76
SSH3-209ENST00000532600 CTTNBP2Q8WZ74 1663 aa32.24■■■□□ 2.75
SSH3-209ENST00000532600 DIP2BQ9P265 1576 aa32.24■■■□□ 2.75
SSH3-209ENST00000532600 KIAA0556O60303 1618 aa32.22■■■□□ 2.75
SSH3-209ENST00000532600 ABCC2Q92887 1545 aa32.18■■■□□ 2.74
SSH3-209ENST00000532600 FAM69CQ0P6D2 419 aa32.18■■■□□ 2.74
SSH3-209ENST00000532600 UHRF1BP1LA0JNW5 1464 aa32.16■■■□□ 2.74
SSH3-209ENST00000532600 UACAQ9BZF9 1416 aa32.15■■■□□ 2.74
SSH3-209ENST00000532600 CSRNP3Q8WYN3 585 aa32.05■■■□□ 2.72
SSH3-209ENST00000532600 ASXL2Q76L83 1435 aa32.04■■■□□ 2.72
SSH3-209ENST00000532600 KDM5BQ9UGL1 1544 aa32.03■■■□□ 2.72
SSH3-209ENST00000532600 GOLGA3Q08378 1498 aa32■■■□□ 2.71
SSH3-209ENST00000532600 ZCCHC11Q5TAX3 1644 aaKnown RBP31.97■■■□□ 2.71
SSH3-209ENST00000532600 PLB1Q6P1J6 1458 aa31.97■■■□□ 2.71
SSH3-209ENST00000532600 TSPOAP1O95153 1857 aa31.96■■■□□ 2.71
SSH3-209ENST00000532600 EEA1Q15075 1411 aa31.94■■■□□ 2.7
SSH3-209ENST00000532600 ABCA8O94911 1581 aa31.93■■■□□ 2.7
SSH3-209ENST00000532600 GLI2P10070 1586 aa31.93■■■□□ 2.7
SSH3-209ENST00000532600 PPRC1Q5VV67 1664 aaKnown RBP31.89■■■□□ 2.7
SSH3-209ENST00000532600 EPRSP07814 1512 aaKnown RBP31.86■■■□□ 2.69
SSH3-209ENST00000532600 FAM9AQ8IZU1 332 aaPredicted RBP31.84■■■□□ 2.69
SSH3-209ENST00000532600 SAMD9Q5K651 1589 aa31.84■■■□□ 2.69
SSH3-209ENST00000532600 KDM6BO15054 1643 aa31.82■■■□□ 2.68
SSH3-209ENST00000532600 CHIC1Q5VXU3 224 aa31.8■■■□□ 2.68
SSH3-209ENST00000532600 P3H3Q8IVL6 736 aa31.8■■■□□ 2.68
SSH3-209ENST00000532600 MAP3K4Q9Y6R4 1608 aa31.78■■■□□ 2.68
SSH3-209ENST00000532600 WDR7Q9Y4E6 1490 aa31.76■■■□□ 2.67
SSH3-209ENST00000532600 KIF21BO75037 1637 aa31.75■■■□□ 2.67
SSH3-209ENST00000532600 ATP10BO94823 1461 aa31.65■■■□□ 2.66
SSH3-209ENST00000532600 COL17A1Q9UMD9 1497 aaPredicted RBP31.64■■■□□ 2.66
SSH3-209ENST00000532600 ARID3CA6NKF2 412 aa31.61■■■□□ 2.65
SSH3-209ENST00000532600 RANGAP1P46060 587 aaPredicted RBP31.61■■■□□ 2.65
SSH3-209ENST00000532600 RAPGEF6Q8TEU7 1601 aa31.6■■■□□ 2.65
SSH3-209ENST00000532600 FHOD3Q2V2M9 1422 aa31.6■■■□□ 2.65
SSH3-209ENST00000532600 AEBP2Q6ZN18 517 aaPredicted RBP31.6■■■□□ 2.65
SSH3-209ENST00000532600 KCNH8Q96L42 1107 aa31.57■■■□□ 2.64
SSH3-209ENST00000532600 TEX14Q8IWB6 1497 aa31.56■■■□□ 2.64
SSH3-209ENST00000532600 CFAP43Q8NDM7 1665 aa31.55■■■□□ 2.64
SSH3-209ENST00000532600 NUP153P49790 1475 aaKnown RBP31.52■■■□□ 2.64
SSH3-209ENST00000532600 CD109Q6YHK3 1445 aa31.52■■■□□ 2.64
SSH3-209ENST00000532600 MAGI3Q5TCQ9 1506 aa31.51■■■□□ 2.63
SSH3-209ENST00000532600 EFCAB5A4FU69 1503 aa31.5■■■□□ 2.63
SSH3-209ENST00000532600 EHMT2Q96KQ7 1210 aa31.49■■■□□ 2.63
SSH3-209ENST00000532600 KDM4FA0A1W2PPD8 638 aa31.41■■■□□ 2.62
SSH3-209ENST00000532600 ABCA9Q8IUA7 1624 aa31.4■■■□□ 2.62
SSH3-209ENST00000532600 UBTFP17480 764 aaKnown RBP31.39■■■□□ 2.62
SSH3-209ENST00000532600 ARHGAP35Q9NRY4 1499 aa31.33■■■□□ 2.61
SSH3-209ENST00000532600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.32■■■□□ 2.6
SSH3-209ENST00000532600 HNRNPUL2Q1KMD3 747 aaKnown RBP31.32■■■□□ 2.6
SSH3-209ENST00000532600 ARAP3Q8WWN8 1544 aa31.26■■■□□ 2.59
SSH3-209ENST00000532600 CDK13Q14004 1512 aaKnown RBP31.25■■■□□ 2.59
SSH3-209ENST00000532600 ADGRL1O94910 1474 aa31.21■■■□□ 2.59
SSH3-209ENST00000532600 PLEKHD1A6NEE1 506 aa31.2■■■□□ 2.59
SSH3-209ENST00000532600 FMN1Q68DA7 1419 aa31.19■■■□□ 2.58
SSH3-209ENST00000532600 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.17■■■□□ 2.58
SSH3-209ENST00000532600 NEO1Q92859 1461 aa31.16■■■□□ 2.58
SSH3-209ENST00000532600 TTC37Q6PGP7 1564 aa31.14■■■□□ 2.58
SSH3-209ENST00000532600 HECW1Q76N89 1606 aa31.14■■■□□ 2.58
SSH3-209ENST00000532600 PHLDB1Q86UU1 1377 aa31.14■■■□□ 2.58
SSH3-209ENST00000532600 FRMPD1Q5SYB0 1578 aa31.1■■■□□ 2.57
SSH3-209ENST00000532600 LRRIQ1Q96JM4 1722 aa31.1■■■□□ 2.57
SSH3-209ENST00000532600 RAPGEF3O95398 923 aa31.08■■■□□ 2.57
SSH3-209ENST00000532600 ATP1B4Q9UN42 357 aaPredicted RBP31.05■■■□□ 2.56
SSH3-209ENST00000532600 FANCAO15360 1455 aa31.01■■■□□ 2.55
SSH3-209ENST00000532600 AKNAQ7Z591 1439 aa31■■■□□ 2.55
SSH3-209ENST00000532600 PCF11O94913 1555 aaKnown RBP30.98■■■□□ 2.55
SSH3-209ENST00000532600 KIF14Q15058 1648 aa30.98■■■□□ 2.55
SSH3-209ENST00000532600 RICTORQ6R327 1708 aa30.97■■■□□ 2.55
SSH3-209ENST00000532600 CFAP74Q9C0B2 1584 aa30.96■■■□□ 2.55
SSH3-209ENST00000532600 CASKIN1Q8WXD9 1431 aa30.95■■■□□ 2.54
SSH3-209ENST00000532600 PLCH2O75038 1416 aa30.94■■■□□ 2.54
SSH3-209ENST00000532600 DENND4BO75064 1496 aaPredicted RBP30.94■■■□□ 2.54
SSH3-209ENST00000532600 TROQ12816 1431 aaPredicted RBP30.92■■■□□ 2.54
SSH3-209ENST00000532600 CLIP1P30622 1438 aa30.9■■■□□ 2.54
SSH3-209ENST00000532600 CDK11AQ9UQ88 783 aaPredicted RBP30.88■■■□□ 2.53
SSH3-209ENST00000532600 MYO5CQ9NQX4 1742 aa30.87■■■□□ 2.53
SSH3-209ENST00000532600 ARHGEF40Q8TER5 1519 aa30.85■■■□□ 2.53
SSH3-209ENST00000532600 ZMYM4Q5VZL5 1548 aa30.83■■■□□ 2.53
SSH3-209ENST00000532600 CCDC18Q5T9S5 1454 aa30.83■■■□□ 2.53
SSH3-209ENST00000532600 FYCO1Q9BQS8 1478 aa30.82■■■□□ 2.53
SSH3-209ENST00000532600 ADAMTSL3P82987 1691 aa30.81■■■□□ 2.52
SSH3-209ENST00000532600 SCAPERQ9BY12 1400 aa30.8■■■□□ 2.52
SSH3-209ENST00000532600 POGZQ7Z3K3 1410 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms