RNA–Protein interactions for RNA: ENST00000532268.1

SRPRA-207, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 829 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-207ENST00000532268 GRIN2AQ12879 1464 aa15.38■□□□□ 0.05
SRPRA-207ENST00000532268 RANGAP1P46060 587 aaPredicted RBP15.37■□□□□ 0.05
SRPRA-207ENST00000532268 TNIKQ9UKE5 1360 aa15.32■□□□□ 0.04
SRPRA-207ENST00000532268 RIMBP3CA6NJZ7 1639 aa15.28■□□□□ 0.04
SRPRA-207ENST00000532268 RIMBP3BA6NNM3 1639 aa15.28■□□□□ 0.04
SRPRA-207ENST00000532268 RIMBP3Q9UFD9 1639 aa15.28■□□□□ 0.04
SRPRA-207ENST00000532268 CTTNBP2Q8WZ74 1663 aa15.27■□□□□ 0.03
SRPRA-207ENST00000532268 CEP170Q5SW79 1584 aa15.27■□□□□ 0.03
SRPRA-207ENST00000532268 ARHGEF11O15085 1522 aa15.27■□□□□ 0.03
SRPRA-207ENST00000532268 CLASP1Q7Z460 1538 aa15.27■□□□□ 0.03
SRPRA-207ENST00000532268 NUP160Q12769 1436 aa15.26■□□□□ 0.03
SRPRA-207ENST00000532268 KIAA0586Q9BVV6 1533 aa15.24■□□□□ 0.03
SRPRA-207ENST00000532268 IQGAP2Q13576 1575 aa15.24■□□□□ 0.03
SRPRA-207ENST00000532268 CEP162Q5TB80 1403 aa15.23■□□□□ 0.03
SRPRA-207ENST00000532268 CLIP1P30622 1438 aa15.21■□□□□ 0.03
SRPRA-207ENST00000532268 CYB5RLQ6IPT4 315 aa15.19■□□□□ 0.02
SRPRA-207ENST00000532268 P3H3Q8IVL6 736 aa15.19■□□□□ 0.02
SRPRA-207ENST00000532268 JPH4Q96JJ6 628 aa15.19■□□□□ 0.02
SRPRA-207ENST00000532268 TTBK1Q5TCY1 1321 aaPredicted RBP15.16■□□□□ 0.02
SRPRA-207ENST00000532268 ARAP1Q96P48 1450 aa15.13■□□□□ 0.01
SRPRA-207ENST00000532268 UGGT2Q9NYU1 1516 aa15.12■□□□□ 0.01
SRPRA-207ENST00000532268 CARMIL2Q6F5E8 1435 aa15.12■□□□□ 0.01
SRPRA-207ENST00000532268 PRG4Q92954 1404 aaPredicted RBP15.12■□□□□ 0.01
SRPRA-207ENST00000532268 EFCAB5A4FU69 1503 aa15.12■□□□□ 0.01
SRPRA-207ENST00000532268 SHROOM2Q13796 1616 aa15.11■□□□□ 0.01
SRPRA-207ENST00000532268 ARHGAP35Q9NRY4 1499 aa15.11■□□□□ 0.01
SRPRA-207ENST00000532268 FHOD3Q2V2M9 1422 aa15.09■□□□□ 0.01
SRPRA-207ENST00000532268 SAMD9Q5K651 1589 aa15.07■□□□□ 0
SRPRA-207ENST00000532268 KIAA0556O60303 1618 aa15.07■□□□□ 0
SRPRA-207ENST00000532268 DISP1Q96F81 1524 aa15.07■□□□□ 0
SRPRA-207ENST00000532268 ATP1B4Q9UN42 357 aaPredicted RBP15.05■□□□□ -0
SRPRA-207ENST00000532268 ERCC6L2Q5T890 1561 aa15.05■□□□□ -0
SRPRA-207ENST00000532268 FMN1Q68DA7 1419 aa15.01□□□□□ -0.01
SRPRA-207ENST00000532268 PTPRGP23470 1445 aa15□□□□□ -0.01
SRPRA-207ENST00000532268 VPS8Q8N3P4 1428 aa15□□□□□ -0.01
SRPRA-207ENST00000532268 APLP2Q06481 763 aa14.98□□□□□ -0.01
SRPRA-207ENST00000532268 ARID3CA6NKF2 412 aa14.94□□□□□ -0.02
SRPRA-207ENST00000532268 PCF11O94913 1555 aaKnown RBP14.92□□□□□ -0.02
SRPRA-207ENST00000532268 CASKIN1Q8WXD9 1431 aa14.92□□□□□ -0.02
SRPRA-207ENST00000532268 PLB1Q6P1J6 1458 aa14.91□□□□□ -0.02
SRPRA-207ENST00000532268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
SRPRA-207ENST00000532268 HNRNPUL2Q1KMD3 747 aaKnown RBP14.91□□□□□ -0.02
SRPRA-207ENST00000532268 FYCO1Q9BQS8 1478 aa14.9□□□□□ -0.02
SRPRA-207ENST00000532268 RAPGEF6Q8TEU7 1601 aa14.89□□□□□ -0.03
SRPRA-207ENST00000532268 TRHP20396 242 aaPredicted RBP14.89□□□□□ -0.03
SRPRA-207ENST00000532268 UACAQ9BZF9 1416 aa14.89□□□□□ -0.03
SRPRA-207ENST00000532268 HECW1Q76N89 1606 aa14.88□□□□□ -0.03
SRPRA-207ENST00000532268 NPM1P06748 294 aaKnown RBP eCLIP14.86□□□□□ -0.03
SRPRA-207ENST00000532268 PPARGC1BQ86YN6 1023 aaKnown RBP14.86□□□□□ -0.03
SRPRA-207ENST00000532268 ABCA8O94911 1581 aa14.85□□□□□ -0.03
SRPRA-207ENST00000532268 NUP153P49790 1475 aaKnown RBP14.83□□□□□ -0.03
SRPRA-207ENST00000532268 ABCC2Q92887 1545 aa14.83□□□□□ -0.04
SRPRA-207ENST00000532268 CCDC18Q5T9S5 1454 aa14.82□□□□□ -0.04
SRPRA-207ENST00000532268 EPRSP07814 1512 aaKnown RBP14.82□□□□□ -0.04
SRPRA-207ENST00000532268 CDK13Q14004 1512 aaKnown RBP14.82□□□□□ -0.04
SRPRA-207ENST00000532268 ADCY10Q96PN6 1610 aa14.81□□□□□ -0.04
SRPRA-207ENST00000532268 CDK11AQ9UQ88 783 aaPredicted RBP14.8□□□□□ -0.04
SRPRA-207ENST00000532268 UHRF1BP1LA0JNW5 1464 aa14.8□□□□□ -0.04
SRPRA-207ENST00000532268 TIAM1Q13009 1591 aa14.79□□□□□ -0.04
SRPRA-207ENST00000532268 MTUS2Q5JR59 1369 aa14.78□□□□□ -0.04
SRPRA-207ENST00000532268 ATP10BO94823 1461 aa14.77□□□□□ -0.04
SRPRA-207ENST00000532268 CFAP43Q8NDM7 1665 aa14.77□□□□□ -0.05
SRPRA-207ENST00000532268 LRRIQ1Q96JM4 1722 aa14.76□□□□□ -0.05
SRPRA-207ENST00000532268 PLEKHD1A6NEE1 506 aa14.76□□□□□ -0.05
SRPRA-207ENST00000532268 KANK4Q5T7N3 995 aaPredicted RBP14.76□□□□□ -0.05
SRPRA-207ENST00000532268 MAP3K1Q13233 1512 aa14.75□□□□□ -0.05
SRPRA-207ENST00000532268 ZCCHC11Q5TAX3 1644 aaKnown RBP14.74□□□□□ -0.05
SRPRA-207ENST00000532268 KDM5BQ9UGL1 1544 aa14.73□□□□□ -0.05
SRPRA-207ENST00000532268 LRRC9Q6ZRR7 1453 aa14.73□□□□□ -0.05
SRPRA-207ENST00000532268 MAPKBP1O60336 1514 aa14.72□□□□□ -0.05
SRPRA-207ENST00000532268 KIF13AQ9H1H9 1805 aa14.71□□□□□ -0.05
SRPRA-207ENST00000532268 KCNH8Q96L42 1107 aa14.7□□□□□ -0.06
SRPRA-207ENST00000532268 EHBP1L1Q8N3D4 1523 aa14.7□□□□□ -0.06
SRPRA-207ENST00000532268 ABCC10Q5T3U5 1492 aa14.69□□□□□ -0.06
SRPRA-207ENST00000532268 TROQ12816 1431 aaPredicted RBP14.68□□□□□ -0.06
SRPRA-207ENST00000532268 FAM69CQ0P6D2 419 aa14.68□□□□□ -0.06
SRPRA-207ENST00000532268 MAGI3Q5TCQ9 1506 aa14.67□□□□□ -0.06
SRPRA-207ENST00000532268 ASXL2Q76L83 1435 aa14.66□□□□□ -0.06
SRPRA-207ENST00000532268 WDR7Q9Y4E6 1490 aa14.64□□□□□ -0.07
SRPRA-207ENST00000532268 SUPT6HQ7KZ85 1726 aaKnown RBP14.64□□□□□ -0.07
SRPRA-207ENST00000532268 KIF14Q15058 1648 aa14.63□□□□□ -0.07
SRPRA-207ENST00000532268 DIP2BQ9P265 1576 aa14.63□□□□□ -0.07
SRPRA-207ENST00000532268 NCOA2Q15596 1464 aa14.63□□□□□ -0.07
SRPRA-207ENST00000532268 CCNB3Q8WWL7 1395 aa14.61□□□□□ -0.07
SRPRA-207ENST00000532268 TSPOAP1O95153 1857 aa14.59□□□□□ -0.07
SRPRA-207ENST00000532268 PHLDB1Q86UU1 1377 aa14.58□□□□□ -0.08
SRPRA-207ENST00000532268 GLI2P10070 1586 aa14.57□□□□□ -0.08
SRPRA-207ENST00000532268 ZNF777Q9ULD5 760 aaPredicted RBP14.55□□□□□ -0.08
SRPRA-207ENST00000532268 MYOM3Q5VTT5 1437 aa14.55□□□□□ -0.08
SRPRA-207ENST00000532268 FAM50AQ14320 339 aaKnown RBP14.54□□□□□ -0.08
SRPRA-207ENST00000532268 CFDP1Q9UEE9 299 aaPredicted RBP14.54□□□□□ -0.08
SRPRA-207ENST00000532268 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.54□□□□□ -0.08
SRPRA-207ENST00000532268 TTC37Q6PGP7 1564 aa14.53□□□□□ -0.08
SRPRA-207ENST00000532268 TRIM26Q12899 539 aaPredicted RBP14.53□□□□□ -0.08
SRPRA-207ENST00000532268 ITSN2Q9NZM3 1697 aa14.51□□□□□ -0.09
SRPRA-207ENST00000532268 GPATCH8Q9UKJ3 1502 aaKnown RBP14.51□□□□□ -0.09
SRPRA-207ENST00000532268 FGD6Q6ZV73 1430 aa14.5□□□□□ -0.09
SRPRA-207ENST00000532268 ARHGAP5Q13017 1502 aa14.5□□□□□ -0.09
SRPRA-207ENST00000532268 MAP3K4Q9Y6R4 1608 aa14.49□□□□□ -0.09
SRPRA-207ENST00000532268 MYO5CQ9NQX4 1742 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms